Lipotes vexillifer (Yangtze River dolphin): 103070957
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Entry
103070957 CDS
T03090
Symbol
ABCA1
Name
(RefSeq) ATP-binding cassette sub-family A member 1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve02010
ABC transporters
lve04148
Efferocytosis
lve04975
Fat digestion and absorption
lve04979
Cholesterol metabolism
lve05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
103070957 (ABCA1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
103070957 (ABCA1)
09150 Organismal Systems
09154 Digestive system
04975 Fat digestion and absorption
103070957 (ABCA1)
04979 Cholesterol metabolism
103070957 (ABCA1)
09160 Human Diseases
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
103070957 (ABCA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lve02000
]
103070957 (ABCA1)
Transporters [BR:
lve02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
103070957 (ABCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
103070957
NCBI-ProteinID:
XP_007447349
UniProt:
A0A340WJR5
LinkDB
All DBs
Position
Unknown
AA seq
2261 aa
AA seq
DB search
MACWPQLRLLLWKNLTFRRRQTCQLLLEVAWPLFIFLILISVRLSYPPYEQHECHFPNKA
MPSAGTLPWVQGIICNANNPCFRYPTPGEAPGVVGNFNKSIVSRLFSDAQRLLLYSHRDT
SIKNIHQVLRTLYQIERSSSGLKFQDFLVDNETFSGFLHHNLSLPRPTVDKILGAGVSLR
KVFLQGYQLHLTNVCNGSKLGELIQLGDQEVSMLCSLPKEKLDAAEQILHSNLDILKPIL
TELNSTSPFPSKELAEATKTLLDSLGIVAQELFSMRSWTDMRQEVMFLTNANSSSSPTQI
YQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGNGTEDDAGTFYDNSTTPYCNDLMK
NLESSPLSRIIWKALKPLLVGKILYTPDTPVTKQVMAEVNKTFQELAVFHDLEGMWQELS
PKIWTFMESSPEMDLVRTLLDSRGNDHFWEQRLEGLDWTAKDIVAFLAKHPEEVQSTNGS
VYTWREAFNETNQAIQTISRFMECVNLNKLEPVATEVLLINKSMELLDERKFWAGIVFTG
IAPGSVELPHHVKYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDMRYVWGGFAYLQDVV
EQAIIQVLTGTEKKTGIYMQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKGIV
YEKEARLKETMRIMGLDNSILWFSWFISSLIPLLVSAGLLVVILKLGNLLPYSDPSVVFI
FLSVFAVVTILQCFLISTLFSRANLAAACGGIIYFMLYLPYVLCVAWQDYVGFTLKIFAS
LLSPVAFGFGCEYFALFEEQGIGVQWDNLFESPVEEDGFNLTTSVSMMLFDTFLYGVMTW
YTEAVFPGQYGIPRPWYFPCTKSYWFGEENNEKSQPGFSQKGTSEICMEEEPTHLKLGVS
IQNLMKVYRDGMKVAVDGLALNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAYIL
GKDIRSEMSTIRQNLGVCPQHNVLFDMLTVEEHIWFYARLKGLSEKHVKAEMEQMALDVG
LPPSKLKSKTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRH
GRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVESSLS
SCRNSSSTVSYLRKEDSVSQSSSDAGLGSDHESDTLTIDVSAISNLIRKHVAEARLVEDI
GHELTYVLPYEAAREGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVAEESGVDAE
TSDGTLPARRNRRVFGDKQSCLRPFTEDDAVDPNDSDIDPESRETDLLSGMDGKGSYQVK
GWKLTQQQFGALLWKRLLIAKRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGKYPSLELQ
PWMYNEQYTFVSNDAPEDVSTQELLSALTGKPGFGTRCMEGNPIPDMPCSVGEEEWTTTP
VPQTIXXXFRKGNWTMENPSPACQCSSDRIKKMLPVCPLGAGGLPPPQRKQNTADILQNL
TGRNISDYLVKTYVQIIAKSLKNKIWVNEFRYGGFSLGASNSQSLPPSEAVNDAIRQMKK
HLKVAKDSSADRFLSSLGRFMTGLDTKNNVKVWFNNKGWHAISSFLNVINNAILRANLQK
GENPSEYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQER
VSKAKHLQFISGVKPVIYWLSNFVWDMCNYVVPATLVIIIFICFQQKSYVSSTNLPVLAL
LLLLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTNNKLNNIN
DILKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWDLVGRNLFAMAVEG
VVFFLITVLIQYRFFIRPRPVKAKLLPLNDEDEDVRRERQRILDGGGQNDILEVKELTKV
YRRKRKPAVDRICIGIPPGECFGLLGVNGAGKSSTFKMLTGDTTVTRGDAFLNKNSILSN
IHEVHQNMGYCPQFDAITELLTGREHVEFFALLRGVPEREVGKVGEWAIRKLGLVKYGEK
YAGDYSGGNKRKLSTAMALIGGPPVVFLDEPTTGMDPKARRFLWNCALSIIKEGRSVVLT
SHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGSNPDLKPVQEFFE
LAFPGSVLKEKHRNMLQYQLPSSLSSLARIFSILSQNKKRLHIEDYSVSQTTLDQVFVNF
AKDQSDDDHLKDLSLHKNQTVVDVALLTSFLQDEKVKESYV
NT seq
6786 nt
NT seq
+upstream
nt +downstream
nt
atggcttgttggcctcagctgaggttgctgctgtggaagaacctcactttcagaagaaga
caaacatgtcagctgttgctggaagtggcctggcctctgtttatcttcctgatcctgatc
tccgtgcggctgagctacccaccctatgaacaacatgaatgccactttccaaacaaagcc
atgccctctgcaggaacacttccttgggttcaggggattatctgtaatgccaataacccc
tgtttccgttatccgactcctggtgaggctcccggggttgttggaaactttaacaagtcc
attgtgtctcgcctgttctcagatgctcagcgacttcttttgtacagccacagagacacc
agcattaagaacatacaccaagttctaaggacattataccagatcgagcgttccagctca
ggcttgaagtttcaggacttcctggtagacaatgaaaccttctctggattcctgcatcac
aacctctctctgccaaggccaactgtggacaagatactgggggctggtgtcagtctccgc
aaggtatttttgcaaggctaccagttacatttgaccaatgtttgcaatggatcaaaatta
ggagagctgattcaacttggtgaccaagaagtctccatgctttgcagcctgccgaaggag
aaactggatgcagcagagcaaatacttcattccaacctggacattctgaagccgatcttg
acagaactaaactccacatctcccttccccagcaaggagctggctgaagccacaaaaact
ttgctggatagtcttgggattgtggctcaagagctcttcagcatgaggagctggactgac
atgcggcaggaggtgatgtttctgaccaacgcgaacagctccagctcccccacccagatc
taccaggccgtgtcccgcatcgtctgcggccatcccgagggtgggggcctgaagatcaag
tcccttaactggtatgaggacaacaactacaaagccctctttggaggcaacggcactgag
gatgatgctggcaccttctatgacaattctaccactccttattgcaatgatttgatgaag
aatctggagtccagtcctctttcccgcatcatatggaaagctctcaagcccctgcttgtt
gggaagatcctgtatacacctgacactccagtcacaaagcaggttatggctgaggtgaat
aagaccttccaggaactggctgtgtttcatgatctggaaggcatgtggcaagagctcagc
cccaagatctggaccttcatggagagcagcccagaaatggaccttgtccggacgctattg
gacagcagaggcaatgaccacttttgggaacagcgattggaaggcttagattggacagcc
aaagatatcgtggcatttctggccaagcacccagaggaagtgcagtccactaatggctct
gtgtacacctggagagaagccttcaatgagaccaaccaggcaatccagaccatctctcgc
ttcatggagtgtgtgaacctgaacaagctggaaccagtggcaacagaggttctgctcatc
aacaagtccatggagctactggatgagcggaagttctgggctgggatcgtgttcactgga
attgctcctggcagtgttgagctgcctcatcacgtcaagtacaagatccggatggatatc
gacaatgtggagaggacgaataagatcaaggatgggtactgggaccccggtcctcgggct
gacccctttgaggatatgcggtacgtctgggggggcttcgcgtacttgcaggatgtggtg
gagcaggcaatcatccaggtgctgacgggcacagagaagaaaactggcatctacatgcag
cagatgccttacccctgttatgttgatgacatcttcctgcgggtcatgagccggtcaatg
cccctcttcatgacgttggcctggatttactctgtggctgtgatcatcaagggcatcgtg
tatgagaaggaggcgcggctgaaggagaccatgcgcatcatgggcctggacaacagcatc
ctgtggttcagctggttcatcagcagcctcatccccctgctcgtgagcgctggcctgctg
gtggtcatcctgaaattaggaaacctgctgccctacagcgaccccagtgtggtgtttatc
tttctgtccgtgttcgccgtggtgaccatcctgcagtgctttctgatcagcacgctcttc
tccagagccaacctggcggcagcctgtggaggcatcatttacttcatgctgtacctgccc
tacgtcctgtgcgtggcgtggcaggactacgtgggcttcacactcaagatctttgcgagc
ctgctgtctcctgtggcttttgggtttggctgtgagtactttgccctttttgaggagcag
ggcattggggtgcaatgggacaacctttttgagagccccgtggaggaagatggcttcaac
ctcaccacctccgtctccatgatgctgtttgacaccttcctctacggggtgatgacgtgg
tacactgaggctgtgtttccaggccaatatggaatccccaggccctggtatttcccttgt
actaagtcctactggtttggcgaggaaaacaatgagaagagccagcctggtttcagccag
aagggaacatcagaaatctgcatggaggaggaacccacccacctgaagctgggcgtgtcc
attcagaacctgatgaaggtttaccgagatggcatgaaggtggcagttgatggcctggcc
ttgaatttctatgagggccagatcacctccttcctgggccacaatggagctgggaagacc
accaccatgtcgatcctgactgggttgttccctcccacctcgggcactgcctacatcctg
gggaaagacattcgctccgagatgagcaccatccggcagaacctgggggtctgtccccag
cataacgtgctgtttgacatgctgactgttgaagagcacatctggttttacgcacgcctg
aaagggctctcggaaaagcacgtgaaagcagagatggagcagatggccctggatgttggt
ttgccgccaagcaaactgaaaagcaaaacaagtcagctgtcaggtggaatgcagagaaag
ctgtctgtggccttggcctttgttgggggatccaaggttgtcattctggatgagcccaca
gccggcgtggacccttactcccgcaggggaatatgggagctgctgctgaaatatcgacac
ggccgcaccattattctctccacacaccacatggatgaagcggacatcctgggggacagg
attgccatcatttcccatgggaagctgtgctgcgtgggctcctccctgttcctgaagaac
cagctggggacaggttactacctgaccctggtcaagaaggatgtggagtcctccctcagc
tcgtgcagaaacagcagtagcactgtgtcgtacctgaggaaggaggacagtgtttctcag
agcagttctgatgctggcctgggcagcgaccatgaaagtgacacgctgaccatcgatgtc
tctgcaatctccaacctcatcaggaagcatgtggccgaggcccggctggtggaagacatt
gggcatgagctgacctacgtgctgccctatgaagccgccagagagggagcctttgtggaa
ctcttccatgagattgatgacaggctctcagacctgggcatctccagttatggaatctca
gagactaccctggaagaaatatttctcaaagtggctgaagagagtggggtggatgctgag
acctcagatggcaccctaccggcaagacgaaacagacgggtcttcggggacaagcagagc
tgtcttcgcccttttactgaagatgatgctgttgatccaaatgattccgacatagatcca
gaatccagagaaacagacctgctcagcgggatggacggcaaaggctcctaccaggtgaag
ggctggaaacttacacagcagcagtttggggcccttttgtggaagaggctgctgattgcc
aaacggagtcggaagggattctttgctcagattgtcctgccggctgtgtttgtctgcatc
gccctggtgttcagcttgatcgtgccgccctttggcaagtaccccagcctggaacttcag
ccctggatgtacaacgaacagtacacatttgtcagtaatgatgctcctgaggacgtgagc
acccaggaactcttgagcgctctcaccggaaagcctggcttcgggacccgatgtatggaa
ggaaacccaatcccagacatgccctgctcggtgggggaggaggagtggaccaccaccccc
gtcccccagaccatcnnnnnnnnnttccgaaaggggaactggacgatggagaacccctcc
cccgcctgccagtgtagcagcgacagaatcaagaagatgctgcccgtgtgtcccctgggg
gctggggggctgcctcctccacaaagaaaacagaacactgcggacatccttcagaacctg
acgggaagaaacatttcggattatctggtgaagacatatgtgcagatcatagccaaaagc
ttaaagaacaagatttgggtgaatgagtttaggtacggtggattttccctgggtgccagt
aattctcagtcacttcctccgagtgaagcagttaatgatgccatcaggcaaatgaagaaa
cacttgaaggtggccaaggacagttctgcagatcgatttctcagcagcttgggaaggttc
atgacaggactggacacgaaaaataacgtcaaggtgtggttcaacaacaagggctggcac
gccatcagctctttcttgaatgtcatcaacaatgcaattctccgggccaacctgcagaag
ggagagaaccctagcgagtatgggattactgccttcaatcaccccctgaacctcaccaag
cagcagctctcggaagtggctctgatgaccacatcagtggacgtcctcgtgtccatctgt
gtcatctttgcgatgtccttcgtcccggccagctttgtcgtgttcctgatccaggaacgg
gtcagcaaagcgaagcatctgcagttcatcagcggagtgaagcctgtcatctactggctc
tccaattttgtctgggacatgtgcaactatgtggtccctgccacgctggtcatcatcatc
ttcatctgcttccagcagaagtcctatgtgtcctccaccaacctgcctgtgctagccctt
ctactgttgctgtacgggtggtccatcacacctctcatgtacccagcctccttcgtgttc
aagatccccagcacagcctacgtggtcctcaccagcgtgaacctcttcatcggcatcaat
ggcagcgtggccacttttgtgctggagctcttcaccaacaataagctgaataacatcaat
gatatcctgaagtcggtgttcttgatcttcccacatttttgcctgggacgggggctcatt
gacatggtgaaaaaccaggcaatggctgatgccttggaaaggtttggggagaatcgcttt
gtctcgccgctgtcttgggacttggtgggacgtaacctcttcgccatggccgtggaaggg
gtggtgttcttcctcatcactgtgttgatccagtaccgattcttcatcaggcccagacct
gtaaaggcaaagcttcttcctctgaatgatgaggatgaagatgtgaggagggagagacag
agaattcttgatggtggaggacagaatgacatcttggaagtcaaggagctgactaaggta
tatagaaggaagaggaaacctgccgtcgacaggatttgcattggcattcctcctggtgag
tgctttggacttctaggtgtcaatggggctgggaaatcatcaactttcaagatgttaacg
ggagataccactgttaccagaggagatgcttttcttaacaaaaatagtatcttatcaaac
atccacgaagtacatcagaacatgggctattgccctcagttcgatgccatcacagagctg
ctgactggaagagagcacgtggagttctttgcgctcttgagaggcgtcccggagagggaa
gttggcaaggttggtgagtgggcaattcggaaactgggcctcgtgaagtatggagaaaaa
tatgctggggactatagtggaggcaacaagcgcaagctctcgacggccatggctttgatt
ggcgggcctcctgtggtgtttctggatgaaccgaccacaggcatggaccccaaagcccgg
cgattcttgtggaattgtgccttaagtatcatcaaggaagggagatcagtagtgcttaca
tctcatagtatggaagaatgtgaagctctttgcactaggatggcaattatggtcaatggg
cggttcaggtgtcttggcagtgtccaacatctgaaaaataggtttggagatggttataca
atagtcgtacgaatagcggggtccaaccctgacctgaagcctgtccaggagttctttgaa
ctcgccttcccgggaagcgtgctgaaggagaagcaccggaacatgctgcagtaccagctt
ccctcttcactgtcttccctggccaggattttcagcatcctttcccagaacaaaaagcga
ctccacatagaagactactctgtctctcagacaacacttgaccaagtatttgtaaacttt
gccaaggaccaaagtgatgatgaccacttaaaggacctgtcattacacaaaaaccagaca
gtagtggatgttgcacttctcacatcttttctgcaggacgagaaagtgaaagaaagttat
gtatga
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integrated database retrieval system
