Lipotes vexillifer (Yangtze River dolphin): 103071300
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Entry
103071300 CDS
T03090
Symbol
POP1
Name
(RefSeq) ribonucleases P/MRP protein subunit POP1 isoform X1
KO
K01164
ribonuclease P/MRP protein subunit POP1 [EC:
3.1.26.5
]
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
103071300 (POP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lve03009
]
103071300 (POP1)
03016 Transfer RNA biogenesis [BR:
lve03016
]
103071300 (POP1)
03029 Mitochondrial biogenesis [BR:
lve03029
]
103071300 (POP1)
Enzymes [BR:
lve01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
103071300 (POP1)
Ribosome biogenesis [BR:
lve03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
103071300 (POP1)
Transfer RNA biogenesis [BR:
lve03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
103071300 (POP1)
Mitochondrial biogenesis [BR:
lve03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
103071300 (POP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
POP1_C
POP1_N
POPLD
Motif
Other DBs
NCBI-GeneID:
103071300
NCBI-ProteinID:
XP_007457220
UniProt:
A0A340XDW3
LinkDB
All DBs
Position
Unknown
AA seq
1015 aa
AA seq
DB search
MSNAKERKHAKKMRNQPTNVTLSSGFVADSGVKYHNGGRKPFQSQKEPHSGTSRQRQTKT
SHHSLAESDAKEQSSSRVTFKKKGGWKAGPEGTSQEIPKYITASTFAQARAAEISAMLKA
VAQKSSNSLVFQTLPRHMRRRAMSHNVKRLPRRLQEIAQKEAEKAVHQKKEHSKNKCHKA
RRCHINRMLEFNRRQKKNKWLETHIWHAKRFHMVKRWGYCLGERPTVKSHRACYRAMTSR
CLLQDLSYYCCLELKGKEEEILKALSPMCSIDTGLTFAAVHCLSGKRQGSLMLYRANKYP
REMLGPVTFIWKAERTPGDTSESRQLWIWLHPSLKQDILEEIKAVCQCMEPTKSTVCLPD
PLLTPSQEKSQTDLPTEKIGKKRKWKDDEENAKPIKKVIGDGTRDPLQPYSWISPTTGIV
ISDLTMEMNRFRLIGPLSHSILTEALKAASVHTEGEDTEKTPHCWWIETCRNPDSVSLHH
RQETVFELLGGITSPAEIPAGTILGLTVGDPRINLPQKRSKVLPNPEKCQDNEKVRQLLL
EGVPVECSHSFLWNQDICKSVTENKISDQDLNRKRSELLVPGSQLFLGPHESKVPILLIQ
QPGKVTGDDQRGWGSGWDVLLPKGWGMAFWIPFIYRGARVGGLKETVVHSQYKRSPNVPG
DFPDCPAGILFAEEQAKNLIEKYKRRPPAKRPNYVKLGTLAPFCCPWEQLTLDWESRVQA
EGESSAASSPGGEESSLRREVVPRAPVPGRARQLPDDEGTPLNGSSEPKGVMDADGPARA
GTEGVVGQGATSSLLCVLRSRKLLRQLSAWCGPSSGNSRAAPRAPGTGQQELSREACLSI
LDRFPKALVWVRLSLLRKGSPEPHTMICVPAEEDLLQLSQDRLYCGPQEPKHSDPFKSQI
RKQKKKKLEKRRKRGCAASEGLAEGDPAAGHQPLTLGLWSGPLPVVTSHCSRVLLGFVTQ
GDFSMAVGCGEALGFVSLTGLLDMLSSQPGVERGLVLLRPPASLQYRFARIVIEV
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatgcaaaagaaaggaaacatgctaagaaaatgagaaaccagcccaccaatgtg
actttatcctctggctttgtggctgacagtggtgtaaagtaccataatggaggtagaaaa
cctttccagtctcaaaaagagcctcattctggaacttcacgacagcggcaaaccaaaaca
agccaccattcactggctgagtctgatgcgaaggagcagtcttcctccagggtaaccttt
aaaaaaaagggaggatggaaagcaggtcccgagggcacttctcaggagattcccaagtat
ataaccgcttctacttttgctcaagctcgagctgctgaaatcagtgccatgttgaaagca
gtggcccagaaatcttctaattcactggttttccagacgctgccacggcacatgagacga
agagccatgagtcacaatgtcaaacgccttcctcgacggttacaggagattgcccagaaa
gaggcagagaaagcagttcatcagaaaaaagaacactcaaaaaataagtgccataaagct
cgacgatgtcacataaaccggatgctagaatttaaccggagacaaaagaagaacaaatgg
ctagaaactcacatctggcacgcgaagcggtttcacatggtcaagaggtggggctactgc
ctgggggagaggccgacagtcaagagccacagagcctgctatcgagccatgacgagccgc
tgcctccttcaggatttatcctactactgttgtttggagttgaagggcaaagaggaagaa
atactgaaggcactttctccaatgtgtagcatagacacaggattgacttttgcagcagtt
cactgtttgtctggaaagcgccaaggtagtctcatgctttaccgggcaaataaataccct
agagaaatgctgggtcctgtgacatttatttggaaggctgagaggacccctggtgacact
tctgagagcaggcagttgtggatctggcttcatccaagtcttaaacaggatatcttagag
gaaataaaagcagtgtgccagtgtatggaacccaccaagtcgactgtctgcctccctgat
ccccttctgacaccatcccaagaaaaaagccaaactgacctgcccacagagaaaattggc
aagaaaagaaaatggaaagatgatgaggaaaatgctaaaccaattaaaaaagtcattggt
gatggaactagagatccacttcaaccgtattcttggatctctccaaccacaggcattgta
atcagtgatttgacgatggagatgaacagattccggctgattggtccactttcccactcc
atcctaactgaagcactcaaagctgcttctgtccacactgagggagaggacacagagaag
acacctcactgttggtggattgaaacctgcaggaatcctgatagcgtttcccttcatcac
agacaggaaaccgtttttgaattgttgggaggaataacatcaccagcagaaattccagca
ggtactattctgggactgacagttggtgatccacgaataaatttgcctcaaaagaggtcc
aaagttttgcccaatccagaaaaatgccaagataatgagaaagttagacagctgcttctg
gagggtgtgcctgtggagtgttcgcatagctttctttggaaccaggatatctgtaagagt
gtcacagagaataaaatctcggatcaggatttaaaccggaagaggagtgaattgctggtg
cccgggtcacagctttttttaggtccccatgaatccaaggttcctatacttttgattcaa
cagccaggaaaagtgactggtgatgaccaacgaggctggggaagtggctgggatgtcctc
ctcccaaagggctggggcatggctttctggattccatttatctatcgaggtgcaagagtt
ggaggattaaaagagactgtagtgcattctcagtataaaaggtcacctaatgtcccaggt
gatttcccagactgccctgctgggattctgtttgctgaagagcaagctaagaatcttatt
gaaaagtacaaaagacgccctccggcaaaacggcccaactacgttaagcttggcaccctg
gcacctttctgctgtccctgggagcagttaaccctagactgggaatcaagagtccaggcc
gaaggcgaatcatctgcagcttcctctccaggtggtgaggagagtagcctgaggagagag
gtggtgcctcgcgctcccgtgcctggaagggctcgtcagctgcctgatgatgagggcaca
cccctaaacggctccagcgagcccaagggagtgatggacgcagatggtccagcccgggcg
gggactgagggggtagtgggccagggtgccaccagcagtctcctctgtgttctgaggagt
agaaaattactgaggcagctgtcagcctggtgtggacccagttctgggaacagtcgggca
gccccacgagctcctggcacagggcagcaagaattgagcagagaggcctgcctgtccatc
ctggaccgcttccccaaggccctggtgtgggtcaggctgtccctgctcaggaagggcagc
cccgagccgcacaccatgatctgtgttccagctgaggaggacctcctccagctcagccag
gatcggctgtactgtgggccccaggagcccaagcatagtgacccattcaagagccagatc
cggaaacagaagaagaagaaactagagaagaggcggaagcgaggctgtgctgcatctgag
ggtctggcagagggggaccctgcagctggacaccagcctctgaccctgggcttgtggtca
ggccctctcccggttgtgacttctcactgctccagagttctccttggctttgtcacacag
ggagatttttccatggctgtcggctgtggggaagccctggggtttgttagtttgacgggc
ttgctggatatgctgtccagccagccaggagtggagaggggtctcgtgttgctgaggccg
cctgcctctctgcagtatcgatttgcgagaattgttattgaggtgtga
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