KEGG   Lipotes vexillifer (Yangtze River dolphin): 103071547
Entry
103071547         CDS       T03090                                 
Symbol
POLQ
Name
(RefSeq) LOW QUALITY PROTEIN: DNA polymerase theta
  KO
K02349  DNA polymerase theta [EC:2.7.7.7]
Organism
lve  Lipotes vexillifer (Yangtze River dolphin)
Brite
KEGG Orthology (KO) [BR:lve00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lve03400]
    103071547 (POLQ)
Enzymes [BR:lve01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     103071547 (POLQ)
DNA repair and recombination proteins [BR:lve03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   DNA polymerases
    103071547 (POLQ)
SSDB
Motif
Pfam: DNA_pol_A POLQ_helical HTH_61 DEAD Helicase_C ResIII DUF4332 Helicase_dom4_arc HHH_5 Rab3-GAP_cat_C
Other DBs
NCBI-GeneID: 103071547
NCBI-ProteinID: XP_007450569
UniProt: A0A340WU27
LinkDB
Position
Unknown
AA seq 2603 aa
MNLTRWSGKRRRSAPGSDFFSGSGGDSSDSPLLLSGPVLSPPPGLRRSLKDRGRPPARAA
GKCKQTFPDDKVDKLLLANWGLPTAVLEKYHSFGVKKMFEWQAECLLLGQVLEGKNLVYS
APTSAGKTLVAELLILKRVLETRKKALFILPFVSVAKEKKYYFQSLFQEVGIKVDGYMGS
TSPTGHFSSLDIAVCTIERANGLINRLIEENKMDLLGMVVVDELHMLGDSPRGYLLELLL
TKISYITQKSASCQAYLASPLSNAVQIVGMSATLPNLELVASWLNAELYHTDFRPVPLLE
SVKIGNSIYDSSLKPVREFQPMLQVKGDEDHVVSLCYETIRDNHSVLLFCPSKKWCEKLA
DIIAYAFYTLHHQAEGLVRSSELPPVILEQKGLLEVMDQLKRLPSGLDSVLQKTVPWGVA
FHHAGLTFEERDIIEGAFRQGQIRVLAATSTLSSGVNLPARRVIIRTPIFSGRPLDILTY
KQMVGRAGRKGVDTVGESILVCKNSEKSKGIALLQGSLKPVRSCLQRQEGEEVTSSMIRA
ILEIIVGGLASTSQDIQTYASCTFLAASMKEGKQGIQKNKDSVQLGAIEACVMWLLENEF
IQITEASDGTEGSVYHPTHLGSATLSSSLSPVDTLDIFADLQRAMKGFVLENDLHIVYLV
TPVFEDWTTIDWYRFFCLWEKLPASMKRVAELVGVEEGFLARCVKGKVVARTEKQHRQMA
IHKRFFTSLVLLDLISEVPLKEINQKYGCSRGQIQSLQQSAAVYAGMITVFSNRLGWHNM
ELLLSQFQKRLTFGIQRELCDLVRVSLLNAQRARFLYASGFLTVADLARADVAEVESVLK
NAVPFKSTRKAVDEEEEAVEERRXXXRTIWVSGRKDLTEREAATLMVEEARMILQQDLVE
MGVQWSPYSLLNSDTHSLTCSESEVKEHKFIPQTKSSYKRLTSKKKSNTIFNDSSVTHLP
NTVQDLDKSREHTDSFYYKFQDGHQEHQVHSISRAKKRASLSINKEKLGTSLNEGKASTT
KVVQTLSSEKTKKEALNFSSEEMSTTSQSWKHSKNLKRSRDSSPVKDTRMCRINLQEQTL
SNPIHYEESFTSDEKNMEFRSPEPVAKSISFCAEGRYSKVSFPSQTEQSCSRNNKISNDI
LVEYFITGSQNKNVTHQATSVVSENGRGLAVESEKTNEVLIQNDSKNQHVNVKHHDTHPI
NQCLEKQFDKQTNTYTKLKKPIARQMPYEKDSSYMNRDSNVVMKCESTKFNAEENKSSNL
QVSGDNISSTEISSGVHVLSGAFGKSGGQHENILNTLRVQVKTDAYAADGTKNNHVSDLG
LDLCDFEDSFYLDTQSEKIIQQISTENAKQEGAKDTSLATGMMQKSLDKQSSVSSFQKEI
HFTFPGEQHSPGMTNHLKLKTIDAMKQSTDSHGVDNLTPESPIFYSPILIGENDPCFKGN
ELSVTDSQLNSFLQGYQTQEAMKPVIPLVPKIRTRTDIEVECLPVPETSLNLSGSLLFDS
FSEEYLVEEQPPDVQAKERLPSEITSVHFADSLCLQPEGPIKKSDVNENQDNQQPLSCFS
DESTIFSEMDSAQMVEALDNVDIFPVQEKHNTAGSLRVLKLSDPVIVGKDYSQREVIGRD
KDKRSQKSKFTGTRQDNSFIWSGASFDFSPGLQRILDNVSSPLENEKLKLTITDLLSLKG
KNTEVNDKQEVISNLETNRVQGIPFSPNVVKGNIDALENNVIHGETSLLPCKENCIVDDN
GLIPPIPSASKLSFPGFLGTSSVKLKKISGGLQLGESYSFGSPSDNKNCDLNPESRNGFK
DDSPIRDTSFSPQLSQDGLQLTLASCSSESLAIIDVASDQTLFQTFMKEWQNKTRFSISL
ACEKISNLTSSKSATIGGRFKQVSSSQESHIGDDGIPVKGCDGILVVGLAVCWGGRDAYY
FSLQKEQKHSEISASLAPPSLDPSLTVKDRMRHLQSCFQKDSDKEHSVIIYDFIQSYKIL
LLSCGISLEQSYEDPKVACWLLDPDSKEPTLHGIVSRFLPHELPLLEEIETGQGTHSLGL
HVTTEHSGRYRASVESILIFSSMNQLNSLLKKENLQDVFCKVEMPSQYCLALLELNGIGF
STAECESQKHIMQAKLDAIETQAYQLAGHSFSFTSSDDIAEVLFLELKLPPNGERKHQGS
KKTLGSTRRGNDDGWKLRLGKQFSTSKDVLNKLRALHPLPGLILEWRRITNAITKVVFPL
QREKRLNRFLGMERIYPVSQSHTATGRITFIEPNIQNVPRDFEIKMPTLVEESPPSQALG
KGLLPMGRGGKKKGCGLNPRQQAKMEERASDRGMPXXXXXMPFSVSMRHAFVPFPGGLIL
AADYSQLELRILAHLSHDHRLIQVLNTGADVFRSIAAEWKMIEPESVGDDLRQQAKQICY
GIIYGMGAKSLGEQMGIKENDAAFYIDSFKSRYTGINHFMRETVKNCKRDGFVQTILGRH
RYLPGIKDNNPYHKAHAERQAINTRVQGSAADIVKIATVNIQKQLETFHSTFKSHGHRES
MLQNDRTGLLPKRKLQGMFCPIRGGFFILQLHDELLYEVAEEDVVQVAQIVKNEMESAIK
LSVKLKVKVKIGASWGELKDFDV
NT seq 7812 nt   +upstreamnt  +downstreamnt
atgaatctgacgcgctggagtgggaaacgacgacgttcagcaccaggctcagacttcttt
tcgggaagtggcggtgacagcagtgacagccccctgctcctctcggggccggtgctgagc
ccgcccccgggcctgagacgcagcctgaaggaccgcggccgcccgccggccagagctgca
gggaaatgcaagcagacgtttcctgacgataaagtagacaagctgctattggcaaattgg
gggcttcctacagcggttctggagaaatatcacagttttggtgtaaaaaagatgtttgaa
tggcaagcagagtgccttttgcttggacaagtcctggaaggaaagaatttagtctattca
gctcctacgagtgctgggaagactcttgttgctgaactacttattttgaagcgggtcttg
gaaacgcggaagaaagctctatttattctgccctttgtctctgtggctaaagagaagaaa
tactatttccagagtctgtttcaggaagtaggaataaaagtagatggttatatgggcagt
acctctccaacagggcatttctcttctttggatattgctgtctgtacaattgagagagcc
aatggtctgatcaatcgcctcatagaggaaaataagatggatctattaggaatggtggtt
gtggatgaattgcatatgctgggggactctccccgagggtatctgctggaacttctgctg
accaagatttcctatattactcagaaatcagcatcttgccaggcatatttagccagtcct
ctgtctaatgccgtgcagattgttggcatgagtgctactctcccaaatttggagcttgtg
gcttcctggttgaatgctgaactctaccacactgactttcgccctgtaccactgctggaa
tcagtaaaaattggaaattctatttatgactcttcattgaagcctgtgagggaatttcaa
cccatgctgcaagtaaagggagatgaggaccatgttgttagtttatgttatgagaccatt
cgtgataaccattcagtattacttttctgtccatcaaagaaatggtgtgagaagttggca
gatatcattgcctatgcgttttacactctacaccatcaagctgagggattggtaagatca
tctgaacttccaccagtgatactggaacaaaagggcctcctagaagtgatggatcagtta
aaacgtttgccttcaggactggactctgtattacaaaaaactgtgccatggggagtagcg
tttcatcatgcaggtcttacttttgaggagagggatatcattgaaggagccttccgtcaa
ggtcagattcgggtcttggcagcaacttctactctttcatctggggtgaatttacctgca
cgtcgtgtaatcattcggactcctattttcagtggtcgacctctagatattcttacttac
aagcagatggttggtcgtgctggcaggaaaggagtagacacagtaggtgagagtatctta
gtttgtaaaaactctgagaaatcaaaaggtatcgctctacttcagggatctctaaaacct
gttcgcagctgtttgcaaagacaagaaggagaagaagtaacttcgagcatgataagagct
attctggagataatagttggtggcctggcaagtacatcacaggacatacaaacttacgct
tcttgcacatttttggctgcaagtatgaaagaagggaagcagggaattcagaaaaataaa
gattctgttcaacttggagcaattgaggcctgtgtaatgtggctactagaaaatgaattc
atccagattactgaagctagtgatggaacagaaggaagtgtgtatcatccaacacatctt
ggttcggcaactctttcttcttcactttctccagttgatactttagatatttttgctgac
ctccaaagagcaatgaagggctttgttttagaaaatgatctgcatattgtttatctggtt
acacctgtgtttgaggattggactactattgattggtatcgatttttctgtttatgggag
aagttgccagcttctatgaaacgggtggcagagctagtgggagttgaagaagggttcttg
gctcgctgtgtgaaaggaaaagtagtagccagaactgagaaacagcaccgacaaatggcc
atccataaaaggttttttaccagtcttgtgctgttagatttaatcagtgaagttccctta
aaggaaattaatcagaaatatggatgcagtcgtggacagattcaatcgttacaacagtca
gctgctgtttatgcagggatgattacagtgttttccaaccgcctgggctggcacaacatg
gaactactactgtcccagtttcagaagcgtcttacatttggcatccagagggagctgtgt
gacctggtccgggtatccttacttaatgcacagagagccagattcctctatgcttctggc
tttcttactgtggccgatcttgccagagcagatgttgctgaggtggaaagtgttctgaaa
aatgctgtgccttttaaaagtacccgaaaggcagtggatgaggaagaggaagcagttgaa
gagcggcggnnnnnnnnncgaactatttgggtgtctggcagaaaagatttaactgaaagg
gaagcggcaactcttatggtagaagaagccagaatgattctgcagcaggacttagttgaa
atgggagtgcagtggagtccatattcccttttaaattctgatacacactcattgacctgc
agtgaatcagaagtcaaagaacacaaatttataccccaaactaagagctcttataaaaga
ttaacatcaaagaaaaaaagtaacacaatatttaatgattcttctgttactcatttacca
aatacagtgcaagatttagataaaagtagagagcatacagattccttttattataaattt
caggatgggcatcaagaacatcaggtgcattccatttccagagcaaaaaaacgggcttct
ttgagtataaataaagaaaagctaggaacctctctgaatgaggggaaagcaagcactacg
aaagttgttcagactctctcatctgagaaaacaaaaaaagaagctttgaatttcagttca
gaagagatgagtacaacctctcaatcttggaaacatagtaagaatctaaaacgatctaga
gacagtagccctgtgaaagacactaggatgtgtagaatcaatttacaagaacagactctg
tctaatcctattcattatgaagagtcatttacttcagatgagaagaatatggaatttaga
agtccagagccagttgctaaaagcatatctttctgtgctgagggaagatatagcaaagta
tcattcccatcacaaacagaacaaagttgttcaaggaacaataaaatatctaatgatatt
cttgtggaatattttatcacaggatcccagaataaaaatgtgactcatcaagccaccagt
gtggttagtgaaaatggaagaggattagctgttgaatcagaaaaaacaaatgaagtgctg
atacaaaatgattcaaaaaaccagcatgttaatgtgaaacaccatgacacccatccaatt
aaccagtgcctggaaaagcagtttgataaacagacaaatacttacaccaaactgaaaaaa
ccaatagcaagacaaatgccgtatgagaaagacagcagttatatgaatagggactcaaat
gttgttatgaaatgtgaaagtacaaagtttaatgctgaggaaaataaatcaagtaatctt
caggtatcaggagataacataagcagcactgagatatccagtggagtacatgtactaagt
ggagcatttggtaaatcaggaggccagcatgagaatattctaaatacccttagagtacaa
gtaaaaacagatgcttatgcagcagatggaactaaaaataatcatgtttctgacttaggt
ttagatctctgtgattttgaagatagtttctacctggatactcagtcagagaaaataatt
caacagatatcaactgaaaatgccaagcaagaaggagcaaaggataccagcctggcaaca
ggaatgatgcagaagagcctagacaaacaaagctcagtgagctcctttcagaaagagatt
cactttacttttccaggtgaacaacattcaccaggaatgacaaatcatttgaaacttaag
actatagatgctatgaaacaaagcactgattcacatggcgttgataacctgactccagaa
agcccaattttttattctccaatattaataggggaaaatgacccatgttttaaaggcaat
gaactttctgttactgactcccaattaaatagttttcttcaaggttatcaaacacaagaa
gctatgaaaccagttatacctctggttcctaaaataagaactcgtactgatatagaagta
gaatgtctgccagttcctgaaacaagtttgaatttgagtggtagtttactgtttgacagt
ttcagtgaagagtacctggtagaagaacaaccacctgatgtacaagcaaaagaacgcctg
ccttctgaaataacttcagtccattttgctgattctctgtgtctacaaccagagggccca
attaaaaaatcagatgtgaatgagaatcaagataatcagcagccattgtcttgtttcagt
gatgagtctactatattttcagaaatggattctgctcagatggttgaagctttggataat
gtagacatatttcctgtccaagagaaacataatactgcaggatctcttagagtattaaaa
ctgagtgatccagtgattgtgggtaaagattattcccaaagagaagtaattggaagagat
aaagataaaaggtctcaaaaatccaaatttactgggacaaggcaagataattcattcata
tggtcaggggcatcatttgatttcagtccaggactgcaaaggattttagataatgtgtcc
agtcctctagaaaatgaaaagctaaaattaaccattacagacttgctcagtttgaaagga
aaaaacacagaggtaaatgacaaacaggaagtgatttcaaatttggagacaaatcgagtg
caaggaattccattttcccctaatgtggtaaaaggcaatattgacgcactagagaacaat
gtcattcatggtgaaacctccctcttgccttgtaaagaaaactgtatagttgatgataat
ggactcattcctcctataccatctgcttctaagttgtcatttccaggttttcttggaaca
tcttctgtaaaacttaagaaaattagtggtggtttacaacttggtgaaagttattcattt
ggctcaccttcagataataaaaactgcgatttaaatccagagagtagaaatggtttcaaa
gatgacagtcctattagagacacaagtttttcaccgcagttatcacaggatggattgcag
ttaactctagcctcatgcagttcagaaagtttggccataattgacgtagcaagtgaccaa
actctctttcaaacattcatgaaggagtggcaaaacaaaactcgattttccatctcattg
gcttgtgaaaagatcagtaatttgacatcttctaaaagtgctactattggtggtaggttt
aagcaagttagttcctctcaggaaagccatattggagatgatggaattcctgttaaaggt
tgtgatggcatcttggtggttggactggcagtatgctggggtggaagagatgcttactat
ttttcattgcagaaggaacaaaagcattctgaaattagtgccagtttggccccaccttct
ctggatccaagcctgactgtgaaagacagaatgcggcaccttcaatcttgctttcaaaag
gattctgataaagaacattctgttatcatctatgacttcatccagagctataaaattctt
cttctgtcttgtggcatctccctggaacaaagttatgaagatcctaaggtggcatgctgg
ttactagatccagattccaaggagccgactcttcatggcatagtttcccgttttcttcct
catgagcttccactccttgaggagatagagactggccaaggaactcacagcctagggctg
catgtcaccactgagcattctgggcgatacagagcatctgtagagtccattctcatcttc
agctctatgaatcaacttaattctttgttgaagaaggaaaaccttcaagatgtcttctgt
aaagtggagatgccctctcagtactgcttggccttgctagaactaaatggaatcggcttt
agtaccgcagaatgtgaaagtcagaaacacataatgcaagccaaactggatgcaattgag
actcaggcctatcaactagctggccatagtttttctttcaccagttcagatgacattgct
gaggttttatttttggaattgaagttgccaccaaatggagagagaaaacaccaaggcagc
aagaaaactttgggttctaccagaagagggaatgatgatggatggaagctaaggctggga
aaacagttcagcactagtaaggatgttttaaataaattaagggcattacatcctttacca
ggcttgatattagagtggagaagaatcactaatgctattaccaaagtggtctttcccctg
cagcgggaaaaacgtctgaatcgtttccttggaatggaaagaatctatcctgtatcacaa
tcacacactgctacaggacgaataacctttatagaaccaaatattcagaatgtaccaaga
gattttgagatcaaaatgccaacactagtagaggaaagcccaccttcccaagccctaggc
aaaggcctacttcctatgggcagaggaggaaaaaagaagggttgtggcctgaaccccagg
caacaggcaaagatggaagagagagcctcagacagaggaatgccnnnnnnnnnnnnnnga
atgccgttttcagttagcatgagacatgcctttgtgcctttcccaggtggtttaatatta
gctgctgattactctcaacttgagctgaggatcttagctcatttatcccatgatcatcgt
ctcattcaagtactaaacactggagctgatgttttcaggagtattgcagctgaatggaag
atgattgagccagagtctgttggggatgatctgaggcaacaagcaaaacagatttgctat
ggaatcatttatggaatgggagctaaatctttgggagagcagatgggtattaaagaaaat
gatgctgctttttacattgactccttcaaatccagatataccgggattaatcatttcatg
agagagacagtgaagaattgtaaaagagatggatttgttcagaccattttgggaaggcat
agatatttaccaggaatcaaagacaacaacccttatcacaaagctcacgctgagcgtcag
gctatcaacacaagagtccaaggttcggcggctgatattgtcaaaatagccacagttaat
attcagaagcaattagaaaccttccactcaaccttcaaatcccatggtcatcgggagagt
atgctccaaaatgacagaacaggattgttaccaaagagaaaactgcaagggatgttctgt
cccatcagaggaggcttcttcatccttcaactccatgatgaactcttatatgaagtggca
gaagaggatgttgttcaggtagctcagattgtcaagaatgaaatggaaagtgccataaaa
ctctctgtgaaactgaaagtgaaagtgaaaataggtgccagctggggagagctgaaggac
tttgatgtgtga

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