Lipotes vexillifer (Yangtze River dolphin): 103071998
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Entry
103071998 CDS
T03090
Symbol
PTCH2
Name
(RefSeq) protein patched homolog 2
KO
K11101
patched 2
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve04340
Hedgehog signaling pathway
lve05200
Pathways in cancer
lve05217
Basal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
103071998 (PTCH2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
103071998 (PTCH2)
09162 Cancer: specific types
05217 Basal cell carcinoma
103071998 (PTCH2)
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Ortholog
Paralog
GFIT
Motif
Pfam:
TRA2_N
Sterol-sensing
Patched
Motif
Other DBs
NCBI-GeneID:
103071998
NCBI-ProteinID:
XP_007450414
UniProt:
A0A340WTK3
LinkDB
All DBs
Position
Unknown
AA seq
1211 aa
AA seq
DB search
MARPPPLGELPPGYTPPARSAAPQILAGSLQAPLWLRAYFQGLLFSLGCGIQRHCGKVLF
LGLLAFGALALGLRVAIIETDLEQLWVEAGSRVSQELQYTKEKLGEEAAYTSQMLIQTPR
QEGENVLTPEALGLHLQAALTASKVQVSLYGKSWDLNKICYKSGVPLIENGMIERMIEKL
FPCVILTPLDCFWEGAKLQGGSAYLPGRPDIQWTNLDPEQLLEELGPFASLEGFRELLDK
AQVGQAYVGRPCLHPDDLHCPSSAPNHHSRQAPNVAQELSGGCHGFSHKFMHWPEELLLG
GMARDPQGQLLRAEALQSTFLLMSPRQLYEHFRGDYQTHDIGWSEEQASTVLQAWQRRFV
QLAQEALPGNASQQIHAFSSTTLDDILHAFSEVSAAHVVGGYLLMLAYACVTMLRWDCAQ
SQGAVGLAGVLLVALAVASGLGLCALLGITFNAATTQVHQDCGAHLGADGAALXXXXLLA
HAFTEAPPGTPLQERTGECLQRTGTSVALTSINNMVAFFMAALVPIPALQAFSLQAAVVV
GCNFAAVMLVFPAVLSLDLHRRHCQRLDVLCCFSSPCSARVIQILPQELGDRTVPVGIAH
LTATVQAFAHCEASSQHVVTILPPQAHLVPPPSDPLASELFSPGGSTRDLLGQEEGTRQK
AACKSLPCARWNLAHFARSQFAPLLLQSHTKAMVLVLSGALLGLSLYGSTLVQDGLALTD
VVPRGTKEHAFLSAQLRYFSLYEVALVTQGGFDYAHSQRALFDLHQRFSSLKAVLPPPAT
QAPRTWLHYYRNWLQGIQAAFDQDWASGRITHHSYRNGSEDGALAYKLLIQTGDAQEPLD
FSQLTTRKLVDQDGLIPPELFYMGLTMWVSSDPLGLAASQANFYPPPPEWLHDKYDTTGE
NLRIPAAQPLEFAQFPFLLHGLQKTADFVETIEGARAACAEAGQAGVHAYPSGSPFLFWE
QYLGLRRCFLLAVCILLVCTFLVCALLLLNPWAASLIVLVLAVMTVELFGIMGFLGIKLS
AIPVVILVASVGIGVEFTVHVALGFLTSQGSRNLRAARALEHTLAPVTDGAVSTLLGLLM
LAGSNFDFIVRYFFVVPTVLTLLGLLHGLVLLPVLLSILGPPPEVVQMYKESPEVLSPPA
AQGGGLRWGVAPTLPQSFARVTTSMTVALRPPPLPGAYIHPASEEPTWSPATTPAASGSS
NLSSRGPCPAT
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atggctcggccgccaccccttggggagctgcccccgggctacacacccccagctcgatct
gcagcaccccagatcctagctgggagccttcaggctccactctggcttcgtgcttacttc
cagggcctgctcttctctctgggctgtgggatccagagacactgtggcaaagtgctcttc
ctgggacttttggcctttggggccctagcattgggtctccgcgtggccatcattgaaaca
gacctagaacagctctgggtggaagcgggcagccgggtgagccaagagctgcaatacacc
aaggagaagctgggggaggaggctgcatacacctcccagatgttgatacagaccccgcgc
caggagggggagaacgtcctcacgcctgaggcacttggcctccacctccaggcagccctc
accgccagtaaagtgcaagtatcactctatggaaagtcctgggatttgaacaaaatctgc
tacaagtcaggagttcccctaattgaaaatggaatgattgagcggatgattgagaagctg
tttccctgcgtgatcctcacccccctcgactgcttctgggaaggagccaaactccaaggg
ggctctgcctacttgccgggccgccccgacatccagtggaccaacctggatccagagcag
ctgctggaggagctgggcccctttgcctcccttgagggcttccgggagctgctagacaag
gcacaggtgggccaggcctacgtggggcggccctgtctgcaccctgacgacctccactgc
ccatctagtgcccctaaccatcacagcaggcaggctcccaatgtggctcaggagttgagc
gggggctgccatggcttctcccacaagttcatgcactggccggaggaactgctgctggga
ggcatggccagagacccccaaggacagctgctgagggcagaggccctgcagagcaccttc
ctgctgatgagtccccgccagctctatgagcacttccggggcgactaccagacacacgac
atcggctggagcgaggagcaggccagcacggtgctgcaggcctggcagcggcgcttcgtg
cagctggcgcaggaggccctgcccgggaacgcgtcccagcagatccacgccttctcctcc
accaccctggatgacatcctgcacgccttctctgaagtcagcgctgcccacgtggtggga
ggctacctgctcatgctggcctacgcctgcgtgacaatgctgcggtgggactgtgctcag
tcccagggtgccgtgggcctcgccggggtgctgctggtggccctagcggtggcctcgggc
ctcgggctctgcgccctgctcggcatcaccttcaatgctgccactacccaggtacatcaa
gactgcggggcacacttgggggccgatggtgctgcccttcnnnnnnnnnncctgctggca
catgccttcacagaggctccacctggcacccctctccaggagcgcacaggtgagtgtctg
cagcgcacaggcaccagcgttgcactcacgtccatcaacaacatggtcgccttcttcatg
gccgccctagttcccatccctgcactgcaggccttctccttgcaggcggcagtagtggtt
ggctgcaactttgcagccgtgatgcttgtcttcccagcggtcctcagcctggacctgcac
cggcgccactgccagcgccttgatgtgctctgctgcttctctagcccctgctctgctcgg
gtgattcagattctgccccaggagctgggggataggacagtaccagtgggcattgctcac
ctgactgccactgttcaggcatttgcgcactgtgaagccagcagccagcatgtggtcacc
atcctgcctccccaagcccacctggtgcccccgccttctgacccactggcctctgagctc
ttcagcccaggagggtcaacacgggaccttctaggccaggaggaggggacaaggcagaag
gcagcctgcaagtccctgccctgcgcccgctggaatcttgcccatttcgcccgctctcag
tttgcacccttgctgctccagtcccacaccaaggccatggtgctggtactttctggggct
cttctgggcctgagcctctatggatcgaccttggtgcaggatgggctggccctgacagat
gtggtgcctcggggcaccaaggagcatgccttcctgagcgcccagctcaggtacttctct
ctgtacgaggtggccctggtgacacagggtggctttgactacgcccactcccaacgcgcc
ctctttgatctgcaccagcgcttcagctccctcaaggcagtgctgcccccaccggccacg
caggcaccccgcacctggctgcactattaccgcaactggctacagggaatccaggctgcg
tttgaccaggactgggcttctgggcgcatcacccaccactcataccgcaatggctctgag
gatggggccctagcctacaagctgctcatccagaccggggatgcccaggagccacttgat
ttcagccagctgaccacaaggaagctggtggaccaggacgggctgattccacctgagctc
ttctacatggggctgaccatgtgggtgagcagtgaccctctgggtctggcagcctcacaa
gccaacttctaccccccacctcccgagtggctgcacgacaagtacgacaccaccggggag
aaccttcgcatcccagcggcccagcccctggagtttgcccagtttccctttctactgcac
ggcctccagaagactgcagacttcgtggagaccattgagggggcccgggcagcgtgtgcc
gaggcaggccaggctggggtgcacgcctaccccagcggctcccccttcctcttctgggag
cagtatctgggcctgcggcgctgcttcctgctggcagtctgcatcctgctggtgtgcact
ttcctcgtctgcgccctgctgctgctcaacccctgggcagcttccctcatagtactggtc
ctggcagtgatgaccgtggagctctttggcatcatgggtttcctgggcatcaagctgagc
gccatccccgtggtgatccttgtggcgtctgtaggcattggtgtcgagttcacggtccat
gtggctctgggcttcctgacctcccagggtagccggaacctccgggctgcccgggcccta
gagcacacattggccccggtgaccgatggggccgtctccacattgctgggtctgctcatg
cttgctggttccaactttgacttcattgtaaggtacttcttcgtggtgccgaccgtactc
acactcctaggcctcctccatgggctcgtgctgctgcctgtgctgctgtccatcctgggc
cccccacccgaggtggtacagatgtacaaggagagcccggaggtcctgagcccaccagct
gcacaaggaggagggctcaggtggggggtagcccccacccttccccagagctttgccaga
gtgactacctccatgaccgtggccctccgcccacccccactgcctggtgcctacatccac
ccggcctctgaagagcctacttggtcccctgctaccacaccagctgccagtggctccagc
aacctcagttctaggggaccatgtccagccacctga
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