Lipotes vexillifer (Yangtze River dolphin): 103072283
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Entry
103072283 CDS
T03090
Symbol
DDX1
Name
(RefSeq) ATP-dependent RNA helicase DDX1 isoform X1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lve03041
]
103072283 (DDX1)
03016 Transfer RNA biogenesis [BR:
lve03016
]
103072283 (DDX1)
Enzymes [BR:
lve01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103072283 (DDX1)
Spliceosome [BR:
lve03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
103072283 (DDX1)
Transfer RNA biogenesis [BR:
lve03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
103072283 (DDX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
DUF5766
Motif
Other DBs
NCBI-GeneID:
103072283
NCBI-ProteinID:
XP_007471271
UniProt:
A0A340YC71
LinkDB
All DBs
Position
Unknown
AA seq
740 aa
AA seq
DB search
MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQQEGKKGKATIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH
GCRATKGLMKGKHYYEVSCHDQGLCRVGWSSMQASLDLGTDKFGFGFGGTGKKSHNKQFD
NYGEEFTMHDTIGCYLDMDKGHVKFSKNGKDLGLAFEIPPHMKNQGLFPACVLKNAELKF
NFGEEEFKFPPKDGFVALSKAPDSFIVKSQHTGNAQVAQTKFLPNAPKALIVEPSRELAE
QTLNNVKQFKKYVDNPKLRELLIIGGVAARDQLSVLDNGVDIVVGTPGRLDDLVSTGKLN
LSQVRFLVLDEADGLLSQGYSDFINRIHNQIPQITSDGKRLQVIVCSATLHSFDVKKLSE
KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKADRLWERLGRNHIRTDEVHAKDNTRPGAN
GPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFMQQGGGPDKKGHQF
SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLS
EIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGNYKGHVDILAPTVQELAALEK
EAQTSFLHLGYLPNQLFRTF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcggccttctccgagatgggtgttatgcctgaaattgctcaagctgtggaagagatg
gattggcttctcccaactgatatccaggctgagtccataccactgatcctaggaggaggt
gatgtccttatggctgcagaaacaggaagtggaaaaactggtgctttcagtattccagtt
atccagatagtttatgaaactctgaaagaccaacaagaaggcaaaaaaggaaaagcaaca
attaaaactggtgcttcagtgctgaacaaatggcaaatgaacccatatgatagaggatct
gcttttgcaattgggtcagatggtctttgttgtcagagcagagaagtaaaggaatggcat
ggatgtagagctactaaaggattaatgaaagggaaacactactatgaagtatcctgtcat
gaccaaggattgtgcagagttgggtggtcctctatgcaggcttccctagacctaggtact
gacaagtttggatttggctttggtggaacaggaaagaaatctcacaataaacaatttgat
aattatggagaggaattcactatgcatgataccattggatgttacctagatatggataaa
gggcatgtcaaattctccaaaaatggaaaagaccttggcctggcatttgaaataccacca
catatgaagaaccaaggcctctttcctgcctgtgttttgaagaatgctgaactaaaattc
aacttcggggaagaagaatttaagtttccaccaaaagatggttttgttgccctttccaag
gcaccggatagtttcattgtcaaatcacagcacacaggtaatgctcaggtggcacaaacg
aagtttctccccaatgctccaaaagctctcattgtcgaaccttcccgagagttggctgaa
caaactttgaataacgtcaagcagtttaagaaatatgtcgataatcctaaattaagggag
cttctgataattggaggagttgcagcacgggatcagctctctgttttggataatggggta
gatatagttgttggtactccaggaagactggatgatttggtgtcaactggaaagctgaac
ttatcccaagttagattcctggtcctggatgaagctgatgggcttctttctcaaggttac
tctgattttataaataggattcacaatcagattcctcagattacctctgatggaaaaaga
cttcaggtgattgtttgctcagccactttgcactcttttgatgtgaagaaactgtctgag
aagatcatgcactttcccacctgggttgatttgaaaggagaagactctgttccagatact
gtccaccatgttgttgtcccagtgaatcccaaagctgacagactctgggaaaggcttggg
agaaaccacattaggactgatgaagtacatgcaaaagataacacaagacctggtgcaaac
ggcccagagatgtggtctgaagctattaaaatcctgaagggggagtatgctgtccgagca
atcaaggaacacaagatggatcaagcaattattttctgtagaaccaaaatcgactgtgat
aacttggagcagtattttatgcaacaaggaggaggacctgataaaaagggtcaccagttc
tcatgtgtttgtcttcatggtgacagaaagcctcatgagaggaagcaaaacttggaaaga
ttcaagaaaggagatgtaagattcttgatttgcacagatgtagccgccagaggaattgat
atccatggtgttccttatgttataaatgtcaccttgcctgatgaaaagcaaaactacgtc
catcgaatcggtagagtaggaagagctgaaaggatggggctggccatttccctggtggca
acagaaaaagagaaggtttggtaccacgtatgtagcagccgtggaaaagggtgttacaac
acaagactcaaggaagacggtggctgtaccatatggtacaatgagatgcagttgctgtct
gagatagaagaacatctgaactgtaccatttcgcaggttgagccagatataaaggtacca
gtggatgaatttgatgggaaagttacttatggtcaaaaaagagctgctggtggtggaaac
tataaaggccatgtggatattttggcacctacggttcaagagctggctgcccttgaaaag
gaggcacagacgtctttcctgcatcttggctatcttcctaaccagttgttcagaaccttc
tga
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