KEGG   Lipotes vexillifer (Yangtze River dolphin): 103072546
Entry
103072546         CDS       T03090                                 
Symbol
PALB2
Name
(RefSeq) partner and localizer of BRCA2
  KO
K10897  partner and localizer of BRCA2
Organism
lve  Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve03440  Homologous recombination
lve03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:lve00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    103072546 (PALB2)
   03460 Fanconi anemia pathway
    103072546 (PALB2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lve03400]
    103072546 (PALB2)
DNA repair and recombination proteins [BR:lve03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA complex
     103072546 (PALB2)
   FA (Fanconi anemia) pathway
    Downstream FA components
     103072546 (PALB2)
SSDB
Motif
Pfam: PALB2_WD40 RNR_Alpha
Other DBs
NCBI-GeneID: 103072546
NCBI-ProteinID: XP_007450070
UniProt: A0A340WSY3
LinkDB
Position
Unknown
AA seq 1192 aa
MLFLLAAGQMEEPPGKPLSCEEKEKLKEKLAFLKREYSKTLARLQRAQRAEKFKNSIKRT
VEGQDSSLQQEVSTQLTDTEPKNKVSPCDTLQINTHVDKETGEKTPITLDLEPESFSPGR
VPAEGSRIQRSDDIQEHCPYRVSGPDGKKRQSKLLGRRKKQERTFISQERESFFDIDSLI
LSGKRLKKQEEINRENPKTPVTEIRTYLSSPKSDIPDSPARVTGANVGSVLILPNAKPQR
DVDALLRGNNFPRVTTLPLHIPSVSSSGQHLEHEPPKSNCELTTHSLENISPASPVNLEM
QNKKMTVFTDNPEVNKSISASDQPPRSPNLEAANSWSINELTYDNLVANENRNLKEQNHS
EMSFKSPNNALGGRNESLLEKEVLSQSKSLSLEVISPVSTENQTHSCTVLEGLLFPAEYY
VRTTRRTSNCQRKVALEAVMQSHLDVRKKGFKTKNKESAKKLNVSNEETNRSEIKMSGTY
AEQPSSKSPQKLLSLTEVNSPAGPTKNDFSRKAVTQPSGRKHKGRRKSVCTPLLDHHELL
LPTSGTSGVNRSKEEVALHKDQNEKAIIHEKEGHCQKEDSLSYRNYVYLSLDDDAFISPD
HKSEMLNLKHLSPFLKITDFQLPDEDFGPLKLEKLKSCSEKLMEPFGSKIYGEGHLKGGN
CVAVEQLTPKQITIGKEDGKEELIILPGKAHPKMPNQRSQPQEKGLSSSILLFTPVNTVA
PDDNGRPTADLCSPTFPVLGSTPAFGSQAHGEKVSAEVVGQACCTPQLSYLKATVSLASD
HKQFWSSPPKLDSSLHVAGREGQPSRDCDSGPQATALPIESSTYKENQLRGNTCQESRKH
STEQTEIADVPACDSLNPGTLQLVSKLKNPSGSCSVDVSAMWWEIAGFKERCIITACEYV
VSLWKPLDTWQWEKIYSWHFAEVPVLQIVLVPDVCNLVCVALGNLEIREIRALLCSPDGK
SEKQVLLSSGNIKAVLGLTKRRLVSSSGTLCDQQVEIMTFAEDGGSKEKQFLMHPEETIL
TFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIGDSYQASVCHRAYSEMGLLFVVL
SHPCAKESKLLGSPVFQLIVINPKTTLSVGVMLYCLPQGQAGRFLEGDVKDHFAAAVLTS
GTIAIWDLLLGHCTALLPPISDQNWSFVKWSGADSHLLAGQKDGNIFVYRCS
NT seq 3579 nt   +upstreamnt  +downstreamnt
atgctctttttgttggccgccggccagatggaagagcctcctgggaagcccctcagctgt
gaggagaaggaaaagttgaaggaaaaattagcattcttgaaaagggaatacagcaagaca
ctggcccgccttcagcgtgcccagagagctgaaaagtttaagaattccattaagagaaca
gtagaaggacaagattcctcgctccagcaggaagtttcaacgcagctaaccgacacagaa
cctaaaaataaagtatctccttgtgacacgttgcaaatcaacacacacgtcgataaagaa
actggagaaaagacacctatcacacttgaccttgagcctgagtcctttagccctggacga
gtcccagcagaaggatcacgcatacaaagatcagatgatatccaagaacattgtccctac
agggtcagtggccccgatggtaagaaaaggcagagtaagctgctagggagaagaaagaaa
caggagagaacatttatttcacaggagagagagtctttctttgacattgattcgcttata
ctctctggaaaaagactaaagaaacaggaagaaatcaatagagaaaatcctaagacacct
gtaactgagataagaacttacctgtcaagtcctaagtctgacattcccgattctccagca
cgagttacaggagctaatgtagggagtgtattaattctgccaaacgccaaaccgcagaga
gatgttgatgcactcttaagaggaaataatttccccagggtgactactcttcctttgcat
attccatcagtcagcagtagtggtcagcaccttgagcatgagcctcctaaaagtaactgt
gaacttactactcacagtttagaaaacattagccctgcttcgcctgtaaacttagagatg
caaaacaaaaaaatgactgtctttacagataacccagaggtaaacaaaagtataagtgca
agtgaccagccgcctagaagtcctaacttggaggcagctaattcatggtctataaatgaa
ctcacctacgataacttagtggcaaatgaaaaccgaaacttaaaagaacaaaatcactca
gagatgtcttttaaatctcccaataatgctcttggtggtagaaatgaaagtcttctggaa
aaagaagttctaagtcagtctaagagtcttagcctagaagtaatttctcctgtttctaca
gaaaatcaaacacattcttgcacagtgcttgaaggccttctatttcctgcagaatattat
gttagaacaacacgacgcacgtcaaattgccagaggaaagtagccctggaggctgtaatg
caaagtcatttggatgtcagaaaaaagggctttaaaactaaaaataaggaatctgctaaa
aagttaaacgtttccaatgaagaaaccaaccgaagtgaaattaagatgtcgggcacgtac
gcagaacaaccaagttcaaaaagtcctcagaaacttctctcgttaactgaagtcaactct
cccgctggccccactaaaaatgacttttctaggaaggcggttacccagccatctggtaga
aaacacaaaggaagaagaaagtcagtctgcacccctctgttagatcaccatgaactactt
ttgccaacttctggcacatcaggtgttaataggtccaaggaagaagttgccttgcacaaa
gatcagaatgaaaaagcaattattcatgagaaggagggtcattgtcaaaaagaggactcc
ctttcttacagaaattacgtgtatttatctttggatgatgatgctttcatttctccagat
cataagagtgaaatgctaaatttaaagcatctgtcaccttttctcaaaatcacagacttt
cagttacctgatgaagactttgggcctcttaagcttgaaaaactgaagtcttgctcagaa
aagctgatggagccttttggatcaaaaatatatggagagggacatcttaaagggggaaat
tgtgttgctgtggagcaactgacccctaaacaaatcactataggaaaggaggatgggaaa
gaggaactgatcatcctgccaggaaaggcacatcctaaaatgccaaaccaaagaagccag
cctcaggagaagggcctttcttcatccattttacttttcactcctgtaaatactgttgca
cctgatgataatggcagaccgacagcagacctatgctcacccactttccccgtcttaggc
tctactccagcctttggctcgcaagcccatggagaaaaggtgtctgcagaggttgttgga
caagcttgctgtacaccccagctttcttacttaaaagccacagtcagccttgctagtgac
cataaacaattttggagcagcccaccaaaattagatagcagcctgcatgtggcaggaagg
gaaggacagccttcccgtgactgtgactctggtccccaagcaacagctctacccatcgag
tcatcaacctacaaagaaaatcagctccgtggaaacacgtgccaggaatcacggaaacat
tccactgaacagactgaaatagcagacgttcctgcttgtgatagcttaaacccaggcacc
ctacaattggtttcaaagttaaagaatccttcaggttcctgttctgtggatgtgagtgcc
atgtggtgggaaatagctggtttcaaagagcggtgtatcataactgcttgtgaatacgta
gtttctctttggaaacctctggatacttggcagtgggaaaaaatttattcctggcacttt
gcagaggtcccagtattacagatagttctagtgcctgatgtttgtaatcttgtgtgtgtg
gctttgggaaatttggaaatcagagaaatcagagcactactttgttctcctgatggtaaa
agtgaaaagcaagtgctcctgagttctggaaatataaaagctgtgcttggcctgacaaag
aggaggctagtcagtagcagtgggaccctttgtgatcaacaagtagagatcatgacgttt
gcagaagatggaggaagcaaagaaaaacagtttttgatgcaccctgaagagactatacta
acttttgctgaggttcaagggatgcaggaagctctgcttggtaccactataatgaacaac
attgttatttggaatttaaaaactggtcaactcctgaaaaagatgcacattggtgattcc
taccaagcttcagtctgtcacagagcttattctgaaatggggctcctgtttgttgttctg
agtcacccttgtgccaaagagagcaagttgttgggaagccctgtgtttcagctgattgtg
attaacccaaagacgaccctgagtgtgggcgtgatgctctactgccttcctcaagggcag
gctggaaggttcctggaaggtgatgtgaaagatcattttgcagcagcagtactaacttct
ggaaccattgccatttgggacttactcctaggtcattgtactgctctccttccacctatc
tctgaccagaactggtcttttgttaaatggtcaggtgcagattctcatttgctggctgga
caaaaagatggaaatatatttgtataccgctgctcctaa

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