Lipotes vexillifer (Yangtze River dolphin): 103073032
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Entry
103073032 CDS
T03090
Symbol
PCDH18
Name
(RefSeq) protocadherin-18
KO
K16499
protocadherin delta 2
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lve04515
]
103073032 (PCDH18)
Cell adhesion molecules [BR:
lve04515
]
Cadherins
Protocadherins
103073032 (PCDH18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
BBS1
TMEM154
Syndecan
MPS-4
ATG31
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
103073032
NCBI-ProteinID:
XP_007456953
UniProt:
A0A340X5W0
LinkDB
All DBs
Position
Unknown
AA seq
1135 aa
AA seq
DB search
MYQMNAKMHFRFVFALLVVSFNSDVLGKNLKYRIYEEQRVGSVIARLSEDVADALVKLPN
PSTVRFRAMQRGNSPLLVVNEDSGEISIGAKIDREQLCQKNLNCSIEFDVITLPTEHLQL
FHIEVEVLDINDNSPQFSRPLIPIEISESAAVGTRIPLDSAFDPDVGENSLHTYSLSAND
FFNIEVQTRTDGAKYAELIVVRELDRELKSSYELQLTASDMGVPQRSGSSILKISISDSN
DNSPAFEQQSYIIRLLENSPIGTLLLDLNATDPDEGANGKIVYSFSSHVSPKIIETFKID
SERGHLTLFKQVDYEITKSYEIDVQAQDLGPNSIPAHCKIIIKIVDVNDNKPEININLMS
PGKEEISYIFEGDPIDTFVALVRVQDKDSGLNGEIVCRLHGHGHFKLQKTYENNYLILTN
ATLDREKRSEYSLTVIAEDKGTPSLSTVKHFTVQINDVNDNPPHFQRSRYEFAISENNSP
GAYITTVTATDPDLGENGQVTYTILESFILGSSITTYVTIDPSNGAIYALRIFDHEEVSQ
ITFVVEARDGGSPKQLVSNTTVVLTIIDENDNIPVVTGPALRNNTAEISIPKGAESGFHV
TRIRAMDRDSGVNAELSCSIVAGNEENIFVIDPRSCDIHTNVSMESVPYTEWELSVVIQD
KGNPQLHTKVLLKCMIFEYAESVTSTAMTSVSQASLDVSMIIIISLGAICAVLLVIMVLF
ATRCNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTVNGTLPIRSHHRPSPS
SSPTLERGQMGSRQSHNSHQSLNSLVTISSNHVPENFSLELTHATPAVEQVSQLLSMLHQ
GQYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRDSPIDRLLGEG
FSDLFLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEEFPAQPQQ
QHPHPSLEDDTQPVDSGEKKKSFSTFGKDSPNGEDSGDTSTSSLLSEMSNVFQRLLPPSL
DTYSECSEMDRCNSLERRKGPLSAKTVGYPQGVAAWAASTHFQNPAANSGPPLGAHSSVQ
PFSKWLPAMEEIPENYEEDDFDNVLSHLGDSKHELMDASELVAEINKLLQDVRQS
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgtaccaaatgaatgctaaaatgcactttagattcgtttttgcactcctggtggtatct
ttcaactccgatgtactgggcaagaatttgaaatacaggatttatgaggagcagagggtt
ggatcggtaattgcaagactatcggaggatgtggctgatgctttagttaagctacctaat
ccttctaccgttcgcttccgagccatgcaaaggggaaattctcctctactcgtggtcaac
gaggatagcggggaaatcagcataggggcaaaaattgaccgcgaacaactatgccagaaa
aacttgaactgttccatagagtttgatgtgatcaccctacccactgagcatctgcagctt
ttccatatcgaagttgaagtgctggatattaatgacaattctccccagttttcaagacct
ctcataccaattgagatatcagagagtgcagcagttgggactcgtatccctctggacagt
gcatttgatccggatgttggggaaaattccctccacacgtactctctctctgccaatgat
ttctttaatatcgaggttcagactaggacggatggagcgaagtatgcagaactcatagtg
gttagagagctggatcgggagctgaagtcaagctatgagcttcagctcaccgcctcggac
atgggggtgcctcagaggtctggctcatccatactaaaaatcagcatttcagactctaat
gacaacagccctgcttttgagcagcagtcttatataatacggctcttagaaaactccccc
attggcactttgctgctagatctgaatgccactgatccagatgagggcgctaatgggaaa
attgtctattccttcagcagtcatgtgtctcccaaaattatagagacttttaagattgat
tcagaaagaggacatttgactcttttcaagcaagtagattatgaaatcaccaaatcctat
gagatcgatgttcaggctcaggatttgggtccaaattcaatcccagctcattgcaagatt
ataattaagattgtggatgttaacgacaataaacctgaaattaacataaacctcatgtcc
cctggaaaagaagaaatatcttatatttttgaaggggatcctattgacacatttgttgcc
ttggtcagggttcaggacaaggattctgggctgaatggagaaatagtttgtaggcttcac
ggacatggtcactttaaacttcagaagacttatgaaaacaattatttaatcttgacaaat
gccacgctggatagagaaaagaggtctgaatacagtttgactgtaatcgctgaggacaag
gggacacccagtctctcaacagtaaaacattttactgttcaaatcaatgatgtaaatgac
aatccaccccacttccagagaagtcgatacgaatttgcaatctcagagaataattcgcca
ggggcatacatcaccaccgttacagccacagatcctgatcttggagaaaatgggcaggtt
acatataccattttggagagttttatcctgggaagttccataactacatatgtaaccatt
gacccatctaatggcgccatctatgccctcagaatctttgatcatgaggaagtgagtcag
atcacttttgtggtcgaagcaagagatggtggaagtccaaagcaactcgtgagcaatacc
acagttgtgctcaccatcatcgacgaaaatgacaacatccctgtggttacaggaccggca
ctgcgcaataataccgcagaaatctccatccccaaaggggccgaaagcggctttcatgtc
acaagaataagggcaatggacagagactctggtgtgaatgctgaactcagctgctccata
gtagcaggtaatgaggagaatatctttgtaattgatccacggtcatgtgacatccatacc
aacgtcagcatggaatctgttccctacacagaatgggagctctcagttgtcatccaggac
aaaggcaatcctcaactgcataccaaagtccttctgaagtgtatgatctttgaatatgca
gagtcagtgacaagtacagcaatgacctcagtaagccaggcgtccttggatgtctccatg
attataattatttccttaggagcaatttgtgcagtgttgttggttattatggtgctgttt
gcaacgaggtgtaaccgagaaaagaaagacactaggtcctacaactgcagggtagcggag
tcaacttaccagcatcacccaaaaagaccctccaggcagatccacaaaggggacatcaca
ttggtgcctaccgtcaacggcactctgcccatcagatctcatcacagaccgtccccttct
tcatctcctaccttagaaagagggcagatgggcagccggcagagtcacaacagtcaccag
tccctcaacagtttggtgacaatctcatcgaaccacgtgccagagaatttctcattagaa
ctcacccatgccacccctgctgttgagcaggtctcccagcttctttcaatgcttcaccag
ggacagtatcaaccaaggccaagttttcgaggaaacaaatattccaggagctatagatat
gcccttcaagacatggacaaatttagcttgaaagacagtggccgtggtgacagtgaagca
ggagacagtgattatgatttggggcgagattctccaatagacaggttgctgggtgaagga
ttcagcgacctgtttcttacagatggacgaattccagcagctatgaggctgtgcacggaa
gagtgcagggtcctgggacactctgaccagtgctggatgccacctctgccctcaccttcc
tctgattataggagtaacatgttcattccgggggaagaattcccagcacagccgcagcag
caacatccgcatccgagtctcgaggatgacacgcagccggtagattccggtgagaagaag
aagagtttttccactttcgggaaggactcgccaaacggtgaggactctggggacaccagc
acgtcctctctgctctcggaaatgagcaatgtgttccagcgcctcttacccccttccctg
gacacctattctgagtgcagtgagatggatcgatgcaactctctggaacgccggaagggg
cctctgtcagccaagacggtgggttacccacaaggggtggcggcctgggcggccagtacg
cattttcaaaaccccgccgccaactctggccccccacttggagctcattccagtgtgcag
cctttttcaaaatggctgccggccatggaggaaatccctgaaaactatgaagaggatgat
ttcgacaacgtgctcagccacctcggtgacagcaaacatgaactcatggatgccagtgag
ctagtggctgagattaacaaactgcttcaagatgtccgccagagctag
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