Lipotes vexillifer (Yangtze River dolphin): 103073080
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Entry
103073080 CDS
T03090
Symbol
PMS2
Name
(RefSeq) mismatch repair endonuclease PMS2
KO
K10858
DNA mismatch repair protein PMS2
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve03430
Mismatch repair
lve03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
103073080 (PMS2)
03460 Fanconi anemia pathway
103073080 (PMS2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lve03400
]
103073080 (PMS2)
DNA repair and recombination proteins [BR:
lve03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
103073080 (PMS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
UfSP_MPN_N
Motif
Other DBs
NCBI-GeneID:
103073080
NCBI-ProteinID:
XP_007448937
UniProt:
A0A340WMQ1
LinkDB
All DBs
Position
Unknown
AA seq
865 aa
AA seq
DB search
MERADAPCSELAKAIKPIDRKSVHQICSGQVVLSLSTAVKELVENSVDASATNIELRLKD
YGAELIEVSDNGCGVEEDNFEGLTLKHHTSKIQEFADLTQVETFGFRGEALSSLCALSDV
TISTCHTSAKVGTRLVFDHNGKILQKTPYPRPRGTTVSVQQLFYTLPVRHKEFQRNIKKE
FSKMVQVLHAYCIISAGVRVSCTNQVGQGKRQPVVCTSGGSSMKENIGSVFGQKQLQSLI
PFVQLPPSDTVREEYGLSSSQALHNLFCISGFISHCAHGAGRSSTDRQFFFINRRPCDPA
KVSRLVNEVYHMYNRHQYPFVVLNISVDMECVDINVTPDKRQILLQEEKLLLAVLKTSLI
GMFDSDVNKLNVSQQPLFDVEGHLIKRHSAEVEKPVPGKQDDPAPLRTRGEEKRAATISR
LREAFSLRHAVEDKSRGPKATAPRRISPRQRSSTPFPSASGPLCSWNHISEPREEGVTST
QGPCDPMGRVDTEEGWGHSSASAGSEEGSSTPKTGSQPSSDHVASSPKDGFSQENVESLE
KLPETDHRLLGTNCHLDHEESGSRPRVLLQSTHLSSPNAKRFKKEGVPLNPDVLPESMKT
QNASACEVDVAVEINKKIVPLDFSMSSLAKRIKQLCQQEQQQEGGQNYRKFRAKICPGEN
QAAEDELRKEISKTMFAEMEIIGQFNLGFIITKLNADIFIVDQHATDEKYNFEMLQQHTV
LQGQRLIAPQTLNLTAVNEAILIENLEIFRKNGFDFVIDEDAPVTERAKLISLPTSKSWT
FGPQDIDELIFMLSDSPGVMCRPSRVRQMFASRACRKSVMIGTALNTSEMKKLITHMGEM
DRPWNCPHGRPTMRHIANLDIISQN
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atggagcgagctgatgcgccgtgttcagaacttgctaaggccatcaaacctatcgatcgg
aagtcagtccatcagatttgttctgggcaagtggttcttagtctaagcactgctgtgaag
gagttggtagaaaatagtgtggatgccagtgccactaacattgagctcaggcttaaagac
tatggggcggagctcattgaagtctcagacaatggatgcggggtagaagaagacaacttc
gaaggcttaactctgaagcatcacacttctaagattcaggagtttgctgacctcactcag
gtggaaacttttggctttcggggggaagctctgagctcactctgtgcactgagtgatgta
actatttctacctgccacacatctgcgaaggttgggactcgactggtgtttgatcacaat
ggaaaaatcctccagaaaaccccctacccacgacccagagggacgacagtcagcgtgcag
cagttattttatacgctacctgtgcgccataaggagtttcaaaggaatattaaaaaggag
ttctccaaaatggtccaggtcttacacgcctactgtatcatttcagcgggtgtccgtgta
agttgcaccaatcaggttggacagggtaagaggcagcctgtggtgtgtaccagtggaggc
tccagcatgaaggaaaatatcggatctgtatttgggcagaaacagttgcaaagcctcatc
ccttttgtgcagctgccccctagtgacactgtccgtgaagaatacgggctgagctcttcc
caggctctgcataacctgttttgtatctcaggttttatttctcactgtgctcacggcgcg
ggaagaagttcaacggacagacagtttttcttcatcaatcggcggccttgtgacccagca
aaggtttccagacttgtgaatgaggtctatcacatgtataaccggcatcagtatccattt
gttgttcttaacatttctgttgatatggaatgtgtcgacatcaacgttactccagataaa
aggcaaattttactacaggaggagaagcttttgttggcagttttaaagacgtctttgata
ggaatgttcgatagtgatgttaacaaactcaacgtcagtcagcagccgctgtttgacgtc
gaaggtcacttaataaaaaggcattcggcagaggtggagaagcccgtgccaggaaagcag
gatgatcccgccccgttaaggactcgcggggaagagaaaagggcagcgaccatttccaga
ctgagagaggccttttcccttcgtcacgcagtggaggacaagtctcggggtccgaaggcc
accgccccaagacggatttctccacgacagagaagcagcaccccatttcctagcgcttca
gggcccctctgctcctggaatcacatctctgaacctcgggaggaaggggtgacttccacc
caggggccctgtgacccgatgggcagagtggacacggaggagggctgggggcacagcagc
gcatctgccggctctgaggaggggtccagcaccccaaaaacgggcagccagcccagcagt
gaccatgtggcaagctcccccaaagatgggttttcgcaagaaaatgtggagtctttggag
aagttacctgaaactgaccatcgtcttttgggcacgaattgccacttagaccacgaagaa
agcggctcccgacctcgagttttgctgcagtctactcatctctcatccccaaacgcaaag
cgttttaaaaaagaaggggttcctttaaatcccgatgtccttccagagtccatgaaaact
cagaacgcttcagcgtgcgaggtggatgtagctgttgaaattaacaagaaaatagtgccc
cttgacttttctatgagctctttagccaaacgaataaagcagttatgtcagcaagaacag
caacaagaaggtggacaaaattataggaagtttcgggcaaagatttgccctggagaaaat
caagcagcagaagatgaactaagaaaagagataagcaaaacgatgtttgcagaaatggaa
atcattggtcagtttaacttgggatttatcatcaccaaactgaatgcagatatcttcata
gtggaccagcatgccacggatgagaaatacaacttcgagatgcttcagcagcacactgtt
ctccagggtcaaaggcttatagcacctcagactctcaatttaacggctgtcaatgaagca
attctaatagaaaatctggaaatattcagaaagaatggctttgactttgttatcgatgaa
gacgcgccggtcactgaaagagctaaattgatttccttgccaactagtaaaagctggacc
tttggaccccaggacatagatgaactgatcttcatgctgagcgacagccccggtgtcatg
tgccggccttcccgggtcaggcagatgtttgcctccagggcctgtcggaagtctgtgatg
attgggactgctcttaacacaagtgagatgaagaaactcatcacccacatgggggagatg
gaccgtccctggaactgtccccacggaaggcccaccatgagacacattgccaatctggac
atcatttctcaaaactga
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