Lipotes vexillifer (Yangtze River dolphin): 103073411
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Entry
103073411 CDS
T03090
Symbol
CACNA1B
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve04010
MAPK signaling pathway
lve04020
Calcium signaling pathway
lve04721
Synaptic vesicle cycle
lve04723
Retrograde endocannabinoid signaling
lve04725
Cholinergic synapse
lve04726
Serotonergic synapse
lve04727
GABAergic synapse
lve04728
Dopaminergic synapse
lve04930
Type II diabetes mellitus
lve05016
Huntington disease
lve05020
Prion disease
lve05022
Pathways of neurodegeneration - multiple diseases
lve05032
Morphine addiction
lve05033
Nicotine addiction
lve05207
Chemical carcinogenesis - receptor activation
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
103073411 (CACNA1B)
04020 Calcium signaling pathway
103073411 (CACNA1B)
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
103073411 (CACNA1B)
04725 Cholinergic synapse
103073411 (CACNA1B)
04728 Dopaminergic synapse
103073411 (CACNA1B)
04726 Serotonergic synapse
103073411 (CACNA1B)
04723 Retrograde endocannabinoid signaling
103073411 (CACNA1B)
04721 Synaptic vesicle cycle
103073411 (CACNA1B)
09160 Human Diseases
09161 Cancer: overview
05207 Chemical carcinogenesis - receptor activation
103073411 (CACNA1B)
09164 Neurodegenerative disease
05016 Huntington disease
103073411 (CACNA1B)
05020 Prion disease
103073411 (CACNA1B)
05022 Pathways of neurodegeneration - multiple diseases
103073411 (CACNA1B)
09165 Substance dependence
05032 Morphine addiction
103073411 (CACNA1B)
05033 Nicotine addiction
103073411 (CACNA1B)
09167 Endocrine and metabolic disease
04930 Type II diabetes mellitus
103073411 (CACNA1B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lve04040
]
103073411 (CACNA1B)
Ion channels [BR:
lve04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
103073411 (CACNA1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
103073411
NCBI-ProteinID:
XP_007459056
UniProt:
A0A340XC97
LinkDB
All DBs
Position
Unknown
AA seq
2261 aa
AA seq
DB search
MVRFGDELGGRYGGAGGGAGGPGPGGLQPGQRVLYKQSMAQRARTMALYNPIPVKQSCFT
VNRSLFVFSEDNVVRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPDGDKTPMSERL
DDTEPYFIGIFCLEAGMKIVALGFVLHKGSYLRNGWNVMDFVVVLTGILATAGTDFDLRT
LRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFYMGRFH
KACFPNSTDAEPVGDFPCGKEAPARLCEGDTECREYWPGPNFGITNFDNILFAVLTVFQC
ITMEGWTDILYNTNDAAGSTWNWLYFLPLIVVGSFFMLNLVLGVLSGEFAKERERVENRR
AFLKLRRQQQIERELNGYLEWIFKAEEVMLAEEDKNAEEKSPLDVLKRAATKKSRNDLIH
AEEGEDRFADLCAVGSPFARASLKSGKTESSSYFRRKEKMFRFFIRRLVKAQSFYWVVLC
VVALNTLCVAMVHYNQPQRLTTALYFAEFVFLGLFLTEMSLKMYGLGPRGYFRSSFNCFD
FGVIVGSIFEVVWAAIKPGTSFGISVLRALRLLRIFKVTKYWSSLRNLVVSLLNSMKSII
SLLFLLFLFIVVFALLGMQLFGGQFNFQDETPTTNFDTFPAAILTVFQILTGEDWNAVMY
HGIESQGGVSKGMFSSVYFIVLTLFGNCILLNVFLAIAVDNLANAQELTKDEEEMEEAAN
QKLALQKAKEVAEVSPMSAANISIAARHQNSAKARSVWEQRASQLRLQNLRASCEALYSE
MDAEERLRFATSRHLRPDMKTHLDRPLVVEPGRDGARGPAGGKARLGRRTEASAVKRGRR
RRSRSRSRSRSKEAAGPRAARSERGRGPGPDGGRRHHRRGSPEEAAEREPRRHRAHRHVP
EPGREGAAPGAKGERRARHRGGPREAESGEEPARRHRTRHKAPRGMESHCDLEASGVMGV
GPVHALPSTCLEKVEEQPEDADNQRNVTRMGSQPSDLSTTVHIPVTLTGLPGETTVVSSG
NVDLESQAEGKKEVEADDVMRGGPRPIVPYSSMFCLSPTNLLRRFCHCIVTMQYFEMGIL
VVIALSSIALAAEDPVQTDSPRNNVLKYMDYIFTGVFTFEMVIKMIDLGLLLHPGAYFRD
LWNILDFVVVSGALVAFAFSGSKGKDINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVN
SLKNVLNILIVYMLFMFIFAVIAVQLFKGKFFYCTDESKELERDCRGQYLDYEKEEVEAQ
PRQWKKYDFHYDNVLWALLTLFTVSTGEGWPMVLKHSVDATYEEQGPSPGYRMELSIFYV
VYFVVFPFFFVNIFVALIIITFQEQGDKVMSECSLEKNERACIDFAISARPLTRYMPQNK
QSFQYKTWTFVVSPPFEYFIMAMIALNTVVLMMKFYDAPYEYELMLKCLNIVFTSMFSME
CVLKIIAFGVLNYFRDAWNVFDFVTVLGSITDILVTEIAETDNFINLSFLRLFRAARLIK
LLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIVGMQVFGNIALDDDTSINRHNN
FRTFLQALMLLFRSATGEAWHEIMLSCLGSRACDALANAAECGSDFAYFYFVSFIFLCSF
LMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFIRVWAEYDPAACGRISYNDMFEMLKHMS
PPLGLGKKCPARVAYKRLVRMNMPISNEDMTVHFTSTLMALIRTALEIKLAPAGTKQHQC
DAELRKEISSVWANLPQKTLDLLVPPHKPDEMTVGKVYAALMIFDFYKQNKTTRDQIHQA
PGGLSQMGPVSLFHPLKATLEQTQPAVLRGARVFLRQKSSASLSNGGAVHTQEGGIKESV
SWATQRTQEVPCEVTMPLERGHSTEIPVVQTGKPAVDVQMQSVAVRGTDGEPQPGLESQG
RAASMPRLAAETQPAPDASPMKRSISTLAPQRPPVARLCNAALDRAPASQAAPHHHHRCH
RRRDRKPRSLEKGPSLSADTDGAPNSAAGPGPPPGDRPAGCRRERRQERGRSQERRQPSA
SSEKQRFYSCDRFGGREPPQPQPPLSSHPASPTAGQEPGPPRQGSASANGSPLLPTSGAS
TPGRGGRRQLPQTPLTPRPSIAYKTANSSPVHFAGAQTSLPAFSPGRLSRGLSEHNALLQ
RDPLSQPLAPSSRIGSDPYLGRRLDSEAAARTQPEDTLTFEEAVATNSGRSSRTSYVSSL
TSQSHPLRRVPNGYHCTLGLSSGGGGRGRRSYHHPDQDHWC
NT seq
6786 nt
NT seq
+upstream
nt +downstream
nt
atggtccgtttcggggacgagctgggcggccgctatgggggcgccggcggcggggcgggc
ggcccgggccctgggggcctgcagccgggccagcgggtcctgtacaagcagtcgatggcc
cagcgcgcgcggaccatggcgctgtacaaccccatccccgtcaagcagagctgcttcacc
gtcaaccgctcgctcttcgttttcagcgaggacaacgtcgtccgcaaatacgccaagcgc
atcaccgagtggcctccgtttgagtacatgattctggccaccatcatcgccaactgtatc
gtgctggcactggagcagcacctacccgacggagacaagacgcccatgtctgagcggctg
gacgacacggagccgtactttatcggcatcttctgcctcgaggccgggatgaagatcgtt
gcactgggcttcgtcctgcacaagggctcctacctgcggaatggctggaacgtcatggac
ttcgtggtggtcctcacggggatcctcgccacagctggcactgactttgacctgcgaacc
ctgcgggctgtgcgtgtgctgaggcccctgaagctggtgtctgggattccaagtctgcag
gtggtgctcaagtccatcatgaaggccatggtcccgctgctgcagatcgggctgcttctc
ttcttcgccatcctcatgttcgccatcattggcctcgagttctacatgggcaggttccac
aaggcctgtttccccaacagtacagacgcagagccggtgggcgacttcccctgcggcaag
gaggccccagcccggctgtgcgagggtgacaccgagtgccgggagtactggccgggaccc
aacttcggcatcaccaacttcgacaacatcctgttcgccgtcctgacggtgttccagtgc
atcactatggagggctggaccgacatcctgtacaacaccaacgatgcggccgggagcacc
tggaactggctgtacttcctgcccctcatcgtcgtcggctccttcttcatgctcaacctg
gtgctgggcgtgctctcgggggagtttgccaaggagcgcgagcgggtggagaaccgccgg
gccttcctgaagctccgccggcagcagcagatcgagcgggagctcaacgggtacctggag
tggatcttcaaggccgaggaagtcatgctggccgaggaggacaagaacgcagaggagaag
tcccctctggatgtgttgaagagagcagccaccaagaagagccgaaatgacctgatccac
gcagaggagggggaggaccgttttgcagacctctgtgctgtggggtcccccttcgcccga
gccagcctcaagagcgggaagacggagagctcgtcgtacttccgcaggaaggagaagatg
ttccggttcttcatccggcgtctggtgaaagcgcagagcttctactgggtggtgctgtgc
gtggtggccctgaacacgctgtgcgtggccatggtgcactacaaccagccccagcggctc
accacggcgctgtactttgcagagtttgttttcctgggtctcttcctcacagagatgtcc
ctgaagatgtacggcctggggcccaggggctacttccggtcctccttcaactgctttgat
tttggggtcatcgtggggagcatcttcgaagtggtctgggcggccatcaagcccggaacg
tcctttgggatcagtgtgctgcgggcactccggctgctgagaatcttcaaagtcacgaag
tactggagctccctgcggaacctggtggtgtcgctgctcaactccatgaagtccatcatc
agcctgctcttcctgctcttcctctttatcgtggtcttcgccctgctgggcatgcagctc
ttcggggggcagttcaactttcaggacgagactccgacgaccaacttcgacaccttcccc
gccgccatcctcacggtcttccagatcctgactggggaggactggaacgcggtgatgtac
catgggatcgaatcgcaaggtggagtcagcaaaggcatgttctcctcggtttacttcatt
gtcctgacgctgtttggaaactgtatcctgctgaacgtcttcttggccatcgccgtggac
aaccttgccaacgcgcaggaactgaccaaggacgaagaggagatggaagaagcagccaac
cagaagcttgctctgcaaaaggccaaagaagtggctgaagtcagccccatgtctgccgcc
aacatctccatcgccgccaggcatcagaactcggccaaggcgcgctcggtgtgggagcag
cgggccagccaactgcggctgcagaacctacgggccagctgcgaggcgctgtacagcgag
atggacgccgaggagcggctgcgcttcgccacctcccgccacctgcggcccgacatgaag
acgcacctggaccggccgcttgtggtggagccgggccgggacggcgcgcgggggcccgcg
gggggcaaggcccggcttggacggcgcacggaggcgagcgcggtgaagaggggccgccgg
cgccgcagccgcagccgcagccgcagccgcagcaaggaggccgcgggcccccgggcggcc
cggagcgagcgtggccgcggcccgggacccgacggcggccggcgccaccaccggcgcggc
tccccggaggaggcggcagagcgggagccccggcgccaccgcgcgcaccggcacgtgccc
gagccgggcagggagggcgcggcgcccggggctaagggcgagcggcgagcgcggcaccgc
ggcggcccccgggaggcggagagcggagaggagccggcgcggaggcaccgcacgcggcac
aaggcgccccgcggcatggagtctcactgtgacctggaagccagtggggtaatgggtgtg
ggccctgtgcatgccctgcccagcacctgtctagagaaggtggaagaacagcccgaggat
gcagataatcagcggaacgttactcgaatgggcagtcaaccctcggatctgagcaccact
gtgcacatcccagtgacgctgactggccttcctggggagaccacggtcgtttccagtggt
aacgtggacctggaaagccaagcagaagggaagaaggaggtggaagctgatgacgtgatg
aggggcggcccccgacccatcgtcccttacagctccatgttctgcttaagccccaccaac
ctgctccgccgcttctgccattgcatcgtgaccatgcagtactttgagatgggcatcctc
gtggtcattgccctgagcagcatcgccctggctgctgaggaccctgtgcagacagactct
cccagaaacaatgtgctgaagtacatggactacatcttcacaggcgtcttcacctttgag
atggtgataaagatgatcgatttgggactgctgctgcaccctggtgcctacttccgggac
ctctggaatattctggacttcgttgtggtcagtggggccctggtggcgtttgccttctca
ggctccaaagggaaagacatcaacaccatcaagtccctgagggtcctgcgtgtgctgcgg
ccgctgaagaccatcaagcggctgcccaagctcaaggctgtgtttgactgtgtggtgaac
tccctgaagaacgtcctcaacatcctgatcgtctacatgctgttcatgttcatatttgcc
gtcatcgcggtgcagctcttcaaggggaagttcttctactgcaccgacgagtccaaggag
ctggagcgggactgcaggggccagtacttggattatgagaaggaggaggtggaggctcag
ccgcggcagtggaagaaatacgacttccactacgacaacgtgctctgggccttgctgacg
ctgttcacagtgtccacgggggaagggtggcccatggtgctgaaacactcggtggacgcc
acctacgaggagcagggcccgagccctgggtaccgcatggagctgtccatcttctacgtg
gtttacttcgtggtcttccccttctttttcgtcaacatctttgtggccttgatcatcatc
accttccaggagcagggggacaaggtcatgtctgaatgcagcctggagaagaatgagagg
gcttgcattgacttcgccatcagcgccagacccctgacgcggtacatgccccagaacaag
cagtcgttccagtacaagacgtggacgttcgtggtctcgccgcccttcgagtatttcatc
atggctatgatagccctgaacactgtggtgctgatgatgaagttctatgacgcgccctac
gagtacgagctgatgttgaagtgtctgaacatcgtgttcacgtccatgttctccatggag
tgcgtgctcaagatcatcgccttcggggtgctgaactatttcagagacgcctggaatgtc
tttgactttgtcactgtgttgggaagtattactgatattttagtaacagagatcgcggaa
acggacaacttcatcaacctcagcttcctccgcctcttccgcgctgcccggctcatcaag
ctgctccgccaaggctacaccatccgcatcctgctctggaccttcgtccagtccttcaag
gcgctgccctacgtgtgcttgctcatcgccatgctgttcttcatctacgccatcgtcggc
atgcaggtgtttggaaacatcgccctggacgacgacaccagcatcaaccggcacaacaac
tttcggacgtttctgcaagccttgatgctgctgttcaggagtgccactggggaggcctgg
cacgagatcatgctgtcctgcctcggcagccgggcctgcgacgcgctcgccaatgccgcc
gagtgtgggagtgacttcgcctacttctattttgtgtccttcatcttcctctgctccttc
ctgatgctgaacctctttgtggcggtgatcatggacaattttgagtaccttacgcgggac
tcttccatcctagggcctcaccacctggacgagttcatccgggtctgggctgagtacgac
ccggctgcgtgtgggcgcatcagttacaatgatatgtttgagatgctgaaacacatgtcc
ccgcccctggggctggggaagaaatgccctgctcgagttgcatacaagcgcctggttcgt
atgaacatgcccatctccaacgaggacatgaccgtccacttcacgtccacgctgatggcc
ctcatccggaccgcactggagatcaagctggctccagctggcacaaagcagcatcagtgt
gacgcagagttgaggaaggagatttcctctgtgtgggccaatctgccccagaagaccctg
gatttactggtgccaccccataaacccgatgagatgacagtggggaaagtgtacgcagct
ctgatgatattcgacttctacaaacagaacaaaaccaccagagaccagattcaccaagct
cccggaggcctgtcccagatgggccccgtgtccctgttccaccctctgaaggccacgctg
gagcagacgcagccggccgtgctccgcggagcccgggttttccttcggcagaagagctcg
gcctccctcagcaatggcggggcagtacatacccaagagggtggcatcaaggagtcggtc
tcctgggccactcagaggacccaggaggtgccctgcgaggtgacgatgcccctggaacgt
ggccactccacggagatcccggtggtgcagacaggaaaaccggctgtggatgtccagatg
cagagcgtggccgtgagaggcactgacggggagccccaacccgggctggagagccagggc
cgagcggcctccatgccccgcctggcagcggagactcagccggccccagacgccagcccc
atgaagcgctccatctccactctggcgccccagcgcccccccgtggcccgtctctgcaac
gccgccctggaccgcgctccggccagccaggccgccccccaccatcaccaccgctgccat
cgccgcagggacaggaagccgaggtccctggagaaggggcccagcctgtccgcagacaca
gatggcgcacccaacagcgccgcggggccagggccgcccccgggggacaggccagcaggc
tgccggcgggagcgcaggcaggagcggggccggtcccaggagcgaaggcagccctccgcc
tcctccgagaagcaacgcttctactcctgcgaccgctttgggggccgtgagccgccacag
ccccagccccccctcagcagtcaccccgcgtcgccaaccgctgggcaggagccaggaccc
ccgagacagggcagtgcttcagcgaacgggagccccctgctgccaacatctggtgctagc
acccctggccgcggcgggcggaggcagctgccccagaccccgctgacgccccgtcccagc
atcgcctataagacggccaactcctcgcccgtccacttcgctggggctcagaccagcctc
cctgccttctcccccggccggcttagccgtggcctttcagaacacaacgccctgctccag
agagaccccctcagccagcccctggcccccagctcacggatcggctccgacccgtacctg
gggcggcgtctggacagcgaggctgctgcccgcacccagcctgaggacacgctcaccttc
gaggaggccgtggccaccaactcgggccgctcgtcccggacttcctacgtgtcctccctg
acctcccagtcgcaccccctccgccgggtgcccaacggctaccactgcactctggggctc
agctctggcgggggcggccgggggcggcgcagctaccaccaccccgaccaagaccactgg
tgctag
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integrated database retrieval system
