Lipotes vexillifer (Yangtze River dolphin): 103074214
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Entry
103074214 CDS
T03090
Symbol
PCDH11X
Name
(RefSeq) protocadherin-11 X-linked isoform X1
KO
K16498
protocadherin delta 1
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
103074214 (PCDH11X)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lve01009
]
103074214 (PCDH11X)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lve04515
]
103074214 (PCDH11X)
Protein phosphatases and associated proteins [BR:
lve01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
103074214 (PCDH11X)
Cell adhesion molecules [BR:
lve04515
]
Cadherins
Protocadherins
103074214 (PCDH11X)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
Drf_FH1
DUF6377
SPAR
Motif
Other DBs
NCBI-GeneID:
103074214
NCBI-ProteinID:
XP_007454820
UniProt:
A0A340X6X2
LinkDB
All DBs
Position
Unknown
AA seq
1350 aa
AA seq
DB search
MDLLSGTYIFAVLLACVVFQSGAQEKNYTIWEEMPENVLIGDLLKDLNLSLIPDKSLTTP
MQFKLVYKTGDVPLIRIEEGTGEIFTTGARIDREKLCAGVLVDTRCFYEVEVAVLPDEIF
RLVKIRFLIEDINDNAPLFPATVINISIPENSAINSRYALPAAIDPDIGINGVQNYQLIK
GQSIFGLDVIETPEGEKMPQLIVQKELDREEKDTYVMKLKVEDGGFPQRSSTAILQVSVA
DTNDNRPVFKENEIEVSIPENAPVGTSVTQLHATDADIGENARIHFYFSNLVSNMAKRLF
HLNSTSGLITIKEPLDREESPNHRLLVLASDGGLIPARSMVLVNVTDVNDNVPSIDIRYI
INPINGTVVLSENAPLNTKIALITVTDKDADLNGRVTCFTDHEVPFRLRPVFSNQFLLET
AAYLDYESTREYAIKLLAADAGKPPLNQSSMLLIKVKDENDNAPVFTQPFISLSVPENNS
PGTQLTKISATDADTGHNAEINYLLGIDAPSEFNLDRRTGILTAAKKLDREKLEKYSFTV
LAKDNGMPPLITNATVLVTVLDQNDNSPIFTHNEYNFYVPENLPRHGTVGLITVTDPDYG
ENSAVTLSILDSSDDFTIDPQTGVIRPNISFDREKQESYTFYVKAEDGGRVSRSSTAKVT
INVVDVNDNKPVFVVPSSNYSFELVLPSTNPGTVVFTVVAVDNDTGMNAELHYSIVGGNT
KGLFMIDQATGNITLKDKCVLADLGLHKLVVKAKDLGQPDSLFNVVNVHLFVNESVTNAT
LIYELVRKNIETPVTQNIETADTSSPSSDYVKIVVAIVAGTITVILVIFITAVVRCCQSP
HLKAAQKNKQNSEWVTPNPENRQMIVMKKKKKKKKKHTPKNLLLNFVTIEETKADDADND
GNSITLDLPIELEEQTMGKYNWGTTPTTFKPDSPDLARHYKSASPQPAFQIQPETPLNSK
HHIIQELPLDNTFVGCDSISKCSSSSSDPYSVSECSYPVTTFKTPVSVHTRPPMKEVIRS
RTPMKETTTVEIWTQPQPQRKSEGKKAGKSQRRVTFHLPESSQESSSDGGLGDHDTGSLP
STSHALPLGYPQEEYFDHTAPNNRTEGDGNSDPESTFIPGLKKAGEITVQPTLEEASDNC
TQECLILGHSDACWMPASLIHSSPLQAQNSALCHSPHLIQTTLRRRNPPVTQTVALCHSP
PVTQAIALCHSPPPAQTSTLHHSPPLAQVTALRHSPPPAQAPALCYSPPLAQAATIHGSP
PLPQAAALHRSPAQPPMGLPQGWGQGAGPDGLLSLDQGAQGSTRSQFYAMSERLHPSDDS
IKVIPLKTFTPGQQARPSSGGSPTMEEHPL
NT seq
4053 nt
NT seq
+upstream
nt +downstream
nt
atggacttgttgtccgggacgtatatatttgcggtcctgttagcatgcgtcgtgtttcag
tctggcgcccaggagaagaactacaccatctgggaagaaatgccagaaaacgtcctgata
ggcgacttgctgaaagacctcaacttgtcgctaattccagacaagtccttaacaactcct
atgcagttcaagttagtgtacaagaccggagatgtgccactgattcgaattgaagagggt
actggtgagatcttcactactggagctcgcattgatcgtgagaaattgtgtgctggtgtc
ttagtggacacccgttgcttttatgaggtggaggttgccgttctgccagatgaaatattt
agactggttaaaatacgttttctgatagaagacataaatgataatgcaccattattccct
gcaacggttatcaacatatcaattccagagaactcagctataaactctcgatatgctctc
ccagcagccattgatcctgacataggaataaacggagttcaaaactaccaactaattaag
ggtcaaagtatttttgggcttgatgttattgaaacaccagaaggagagaagatgccacaa
ttgatagttcaaaaggagctagatagggaagagaaagatacatatgtaatgaaattaaag
gttgaagatggtggctttcctcaaagatccagtactgccattttgcaagtcagtgttgct
gatacaaacgataaccgcccagtcttcaaggagaatgagattgaagtcagtataccagaa
aatgctcctgtaggtacttcagtgacacaacttcatgccacagatgctgacataggtgaa
aatgccaggattcacttctatttcagcaatctagtctccaacatggccaagaggctattt
cacctcaactccaccagtggacttatcacaatcaaagaaccactggatagggaggaatca
ccaaaccacaggttactggttttagcaagtgatggtggattgataccagcaagatcaatg
gtgctagtaaatgttacagatgtcaatgataatgtcccatcaattgacataaggtatatc
atcaatccaatcaatggtactgtggttctttcagaaaatgctccactcaacacaaaaatt
gcactcataactgtgacagataaggatgctgaccttaatggtagggtgacatgctttaca
gatcatgaagtccctttcaggttgaggccagtattcagtaatcagttcctcctagagact
gctgcatatcttgactatgagtccacaagagaatatgctattaaattactggctgcagat
gctggcaaacctcctttgaatcaatcatccatgctcctcatcaaagtaaaagatgaaaat
gacaatgctccagttttcactcagcctttcataagtctttctgttcctgagaataactct
cctggcacccagttgacaaaaataagtgcaacggatgcagacacagggcataatgctgag
ataaactacctgcttggcattgatgctccatctgaattcaacctggatcgtcgtacaggc
attctgaccgcagcaaagaaactggatagagaaaaactggaaaaatattcattcacagtt
ctggcaaaagataacgggatgccacctttaataaccaatgccacagtcttagtgactgtt
cttgatcagaatgacaacagtccaattttcactcacaatgagtacaacttctatgtccca
gaaaaccttccaagacatggcacagtaggactaatcactgtaactgatcctgattatgga
gaaaactctgcagtcactctctccattttagactcaagtgatgacttcaccattgatcca
cagactggtgtcatccgaccgaatatttcctttgatagagaaaaacaagaatcttatact
ttctatgtaaaggctgaggatggtggtagggtatcacgttcttcaactgccaaagtcacc
ataaatgtggttgatgtcaacgacaacaaaccagtttttgttgtcccttcttcgaactac
tcctttgaattggttctgccatccactaatccaggcacagtggtattcacggtagttgct
gttgacaatgacactggcatgaatgcagagcttcattacagcattgtaggaggaaacaca
aaaggtctgtttatgattgaccaagcaacaggcaacattacactgaaggataaatgtgtc
cttgcagaccttggtttacacaaactggtagtcaaagccaaggacttagggcaacctgat
tctctcttcaatgttgtaaatgttcatctatttgtgaatgagtcagtgaccaatgctaca
ctgatttatgaattggtgcgcaaaaacattgaaacaccagtgacccaaaatattgagaca
gctgatacatcctcaccatccagtgactatgtcaagatcgtggttgccattgttgcaggc
accataactgtcatccttgttattttcatcactgctgtagtaagatgctgccaatcacca
caccttaaggctgctcagaaaaacaagcagaattccgaatgggttactccaaacccagaa
aacaggcagatgatagtgatgaagaaaaagaagaagaagaagaagaagcatacccctaag
aacttgctgcttaactttgttactattgaagaaactaaggcagatgatgctgacaatgat
ggaaacagcatcacactagaccttcccattgaactggaagagcaaaccatgggcaagtac
aactggggcactacacctactactttcaagcctgacagccctgatttggcccggcactac
aaatctgcctctccacagcctgccttccagatccagccagagactcccctgaattcaaag
caccacatcatccaggaactgcctcttgataacaccttcgtgggctgtgactccatctcc
aagtgttcctccagcagttctgatccctacagcgtttctgagtgcagctatccagtgaca
actttcaagacccctgtgtctgtacacaccagaccgccaatgaaggaggttatacgatct
cgcacacccatgaaagagacaactactgtggagatctggactcaaccccaaccacagcgg
aaatccgagggaaaaaaggcaggaaagtcccagcggcgtgtcacatttcacctaccagaa
agctctcaggaaagcagcagtgatggtggactaggagaccatgatacaggcagccttccc
agcacatcccatgccctgccccttggctatcctcaggaggagtactttgatcatactgca
cccaacaaccgcactgaaggggatggcaactctgatcctgaatccactttcattcctgga
ttaaagaaagctggagaaataactgttcaaccaaccttggaagaggcctctgacaactgc
actcaagaatgtctcatcttgggccactctgatgcctgctggatgccagcttctctgatc
cattccagccctttacaggcacagaactctgctctgtgccacagcccacacctcatacag
accactcttcgccggcgcaatcctccagtgacacagactgttgcactctgccacagtccg
ccggtgacccaggctattgcactgtgccacagccctccaccagcacaaacctccactctg
caccacagcccacctctagcacaggttactgctcttcgccacagccctccaccagcacag
gcccctgccctctgctacagccctcccctggcacaggctgccacaatccatggaagccct
cctctgccacaggctgctgccctccatcgcagccccgcacaaccaccaatgggtctgcca
caaggctgggggcaaggtgctggccctgatggactactttctcttgatcagggagcacaa
ggtagtacaagatctcagttttatgccatgtctgaaagacttcatcctagtgatgattca
attaaagtcattcccttgaaaactttcactccagggcagcaggccagaccctctagtggt
ggttctcccactatggaagaacatcctttataa
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