Lipotes vexillifer (Yangtze River dolphin): 103074283
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Entry
103074283 CDS
T03090
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve03030
DNA replication
lve03410
Base excision repair
lve03420
Nucleotide excision repair
lve03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
103074283 (RFC1)
03410 Base excision repair
103074283 (RFC1)
03420 Nucleotide excision repair
103074283 (RFC1)
03430 Mismatch repair
103074283 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lve03032
]
103074283 (RFC1)
03400 DNA repair and recombination proteins [BR:
lve03400
]
103074283 (RFC1)
DNA replication proteins [BR:
lve03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
103074283 (RFC1)
DNA repair and recombination proteins [BR:
lve03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
103074283 (RFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
AAA_22
Rad17
BRCT_2
AAA_14
RuvB_N
AAA_5
AAA_30
AAA_33
AAA_7
AAA_18
AAA_16
AAA_17
Zeta_toxin
nSTAND3
RNA_helicase
DUF4898
AAA_19
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
103074283
NCBI-ProteinID:
XP_007449491
UniProt:
A0A340WL93
LinkDB
All DBs
Position
Unknown
AA seq
1245 aa
AA seq
DB search
MRGFGGERRQERGHKLGTGLTAFLAPRASALSRSQRAGLLVLRSNFNFFPLLGEGSNEGD
FGGSAEGLYGTLQRVLRDIKDASDVVSYGEQQLIQLLIIQDIRKFFGVIPSGKKVVSETA
KKNEKTKSAEETIKAKKGIKEIKVNRSCKEDDFKQKQPNKKKRIIYDSDSESEETVQVKN
SKKRPEKLPLSSKPAKIRYQDPVTYISETDEEDDFVCKKAASKSKENGGSPNSYLGASNM
KKNEENTKTLNTKNKPLSPMKLTPTSVLDYFGTASVQRSAKKMVASKRKEPSQNADESRL
NDEAIAKQLQLDEDAELERQLHEDEEFARTLAMLDEEPKTKKAQKDSGERETFSSVQASL
CKAEKPKYPHKEQFSDDRKNCSPKKQTKCESSKESQQHSRSSTHKVGETSSPKTNSKLAP
SKKKEESSNKETEPMASKRKENAIELKETRTPKKIKSSPAKKESISPEDSEKRRTNYQAY
RSYLNREGPKALGSKEIPKGAENCLEGLTFVITGVLESIERDEAKSLIERYGGKVTGNVS
KKTNYLVMGRDSGQSKSDKAAVLGTKIIDEDGLLNLIRTMPGKKSKYEIAAEAEMKKEKS
KLERTPQKNDQGKRKISPTKKESESKKCKLTPKKQSSIKSVKKETSMFQRGLDFKEQVAE
ETNGGSWARNLADGSSENKVENLLWVDKYKPASLKTIIGQQGDQSCANKLLRWLQNWHKS
PSEDKKHAAKFGKFAGKDDGSSFKAALLSGPPGVGKTTTASLVCQELGYSYVELNASDTR
SKNSLKEIVAESLNNTSIKGFYSSGAAHSVGTKHALIMDEVDGMAGNEDRGGIQELIGLI
KHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIKGAMMSIAFKEGLKIPPPAMN
EIILGANQDIRQVLHNLSMWCARSKALTYDQAKADSHRAKKDIKLGPFDVARKVFVTGEE
TAHMSLVDKLDLFFHDYSIAPLFVQENYIHVKPVAAGGDMKKHLMLLSRAADSISDGDLV
DRQIRSKQNWSLLPTQAIYASVLPGELMRGYMTQFPTFPSWLGKHSSMGKHDRIVQDLAL
HMSLRTYSSKRTVNVDYLSHIRDALVQPLTSQGIEGVQDVVALMDTYYLMKEDFENIMEI
SSWGDRPSPFSKLDPKVKAAFTRAYNKEVHLIPYSLQAVKTHRHSTGPALDSEYNEELNE
DDSQSDEKDQDTLETDAMFKKKTKSSKPSKSEKESRKGKGKSSKK
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atgcgtggcttcggaggggagcgaaggcaagaaaggggccacaaactgggcactggtctc
acagctttccttgcaccgcgggcttcagctctcagccgcagccagcgcgcagggctcttg
gtgctgcgcagcaattttaacttttttccactcttgggggaagggagtaatgaaggtgat
tttgggggctcagcggaaggactctatggaacattacaaagagttttaagggacatcaaa
gatgcctctgatgttgtcagttatggtgaacaacagcttattcaacttttgattattcag
gatattcgaaaattctttggggttataccaagtggaaagaaagttgtaagtgaaacagca
aagaagaatgagaaaacgaagtctgctgaagaaactataaaagcgaagaaaggaataaag
gaaatcaaggtaaatcgttcttgtaaagaagatgacttcaagcagaagcaaccaaacaag
aaaaagaggatcatctatgattcagattcagaatcagaggagacagtgcaggtaaaaaac
tccaaaaagcgaccagaaaaattgccactgtcttctaagcctgctaaaattcgataccag
gatcctgttacatacatttcagaaacagatgaagaagatgactttgtgtgtaagaaggca
gcctctaaatcaaaagagaatggaggatctccaaatagttatcttggagcatcaaacatg
aaaaagaatgaagaaaacactaagacactaaacactaagaataagcctttgtcaccaatg
aaacttacccccacatcagtgcttgattattttggaactgcgagtgtccaaagatcggct
aagaagatggtggcaagcaaaagaaaagagccttcacaaaatgcagatgagtccagatta
aatgatgaagccatcgccaagcaattgcaacttgatgaagatgcagagctagagagacaa
ctgcatgaagatgaagagtttgccagaactttagctatgttggatgaagaacccaagacc
aaaaaggctcaaaaggactcaggagagagagagacgttttcatctgtacaagccagttta
tgtaaagcagaaaaacctaaatatcctcataaagaacaattttcagatgacagaaagaac
tgcagtcctaagaagcaaactaaatgtgaaagttcaaaagaatctcagcaacattccagg
tcatccactcataaagtaggagaaacttcttctccaaaaaccaattccaagctggcacca
tctaaaaaaaaagaagaaagttctaataaagaaacagagcctatggcctcaaaaagaaaa
gaaaatgccattgagttaaaagagacaagaactcctaagaaaatcaaaagttctccagct
aaaaaagagtctataagtcctgaagattctgaaaagagacgcactaattatcaagcttat
cgaagctacttaaatcgagaaggtcccaaagctctgggctccaaagagataccaaaggga
gctgaaaattgcttggaaggccttacatttgtaatcacaggagtgctggagtccattgaa
cgagatgaggccaagtctctaattgagcgttatgggggaaaagtaacaggaaatgtcagc
aagaaaacaaactaccttgtcatgggtcgtgatagtggtcagtccaagagtgataaggca
gcagtcttgggaacaaaaattattgatgaagatggcctattgaatctgattcgaactatg
ccaggcaagaagtccaagtatgaaatagcagctgaagctgagatgaagaaagaaaaatcc
aaattggaaagaacaccccaaaaaaatgaccaaggaaaaagaaaaattagtccaactaag
aaggaatcagaatctaaaaagtgcaaactgactcccaaaaagcaaagctctataaagtca
gtaaaaaaggaaacaagtatgtttcagagaggcctggacttcaaggagcaggtggctgag
gaaacaaatggtggcagctgggctaggaatttggctgatggcagcagtgaaaacaaagtg
gagaatttgctctgggtggataaatataagccagcctcgctcaagaccataattggacag
caaggtgaccagagctgtgccaacaaactcctacgctggctccaaaactggcacaagagt
ccatccgaagataagaaacacgcagcaaagtttggtaaatttgctggcaaagatgatggc
tccagttttaaagctgcattgctctcaggccctcctggtgttggcaaaacaaccacagct
tctctggtttgccaggaattgggatatagctacgtggaactgaatgcaagtgatactcgg
agtaagaacagtttgaaggagattgttgctgaatcgctgaataataccagcatcaaaggc
ttttattcaagcggagcagcccattcagtaggcacgaaacatgctctcatcatggatgaa
gtagatggcatggccggcaatgaggacaggggaggaattcaggaattaattggcctgata
aaacatacaaaaattcccattatttgtatgtgcaatgatagaaatcatcccaagattcga
tctttggttcattattgttttgatcttcgttttcaaagacctcgggttgaacaaattaag
ggtgctatgatgtctattgcatttaaagagggtttgaagatcccccctccagctatgaat
gaaataattttgggagccaatcaagatatcagacaggttttacacaatctgagtatgtgg
tgtgcacgaagtaaagcactaacctatgaccaggctaaggctgattctcatagagccaaa
aaggatatcaaattgggcccatttgatgttgcccggaaagtgtttgtaactggagaggag
actgctcatatgtcacttgtggacaaattagatctcttttttcatgattattcaatagca
cccctctttgtccaggagaactacatacatgtgaagcctgtagccgcagggggtgacatg
aaaaagcacttgatgcttttaagcagagcagcagacagcatatctgatggtgacctagtg
gaccgtcagatccggagtaagcaaaactggagtcttctgcccacacaggccatttatgcc
agtgttcttcctggagagttaatgagggggtacatgacccagtttcctaccttcccaagt
tggttggggaagcactcgtctatgggcaaacacgatcgtattgttcaggacctagcattg
catatgagtctcagaacttactccagcaaaaggaccgtaaatgtggattatctgtcacat
ataagggatgcacttgtacagcccttgacctcacaagggatagaaggagtacaggatgtt
gttgctcttatggacacgtattatttgatgaaagaagactttgagaatatcatggaaatt
agcagctggggagacagacctagtcccttctccaagctggatcccaaggtgaaagcagcc
ttcacaagagcttacaataaggaagtccaccttattccgtattcacttcaggcagtaaag
acacacagacacagcacaggcccagcgctggattctgaatacaatgaagaattaaatgaa
gatgactctcaatctgatgagaaagaccaggacactttggaaactgatgctatgttcaag
aaaaagacaaaatcttcaaagccttcaaaatcagaaaaagagtccagaaaaggaaaagga
aaaagttcaaagaaataa
DBGET
integrated database retrieval system
