Lipotes vexillifer (Yangtze River dolphin): 103075004
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Entry
103075004 CDS
T03090
Symbol
EXOSC5
Name
(RefSeq) exosome complex component RRP46
KO
K12590
exosome complex component RRP46
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103075004 (EXOSC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lve03019
]
103075004 (EXOSC5)
Messenger RNA biogenesis [BR:
lve03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
103075004 (EXOSC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
103075004
NCBI-ProteinID:
XP_007458677
UniProt:
A0A340XEZ1
LinkDB
All DBs
Position
Unknown
AA seq
235 aa
AA seq
DB search
MEGVMQTETKIRAESGIESGPRGSGCSLRNFACEQNLLSRPDGSASFLQGDTSVLAGVYG
PAEVKVSKEIFNKATLEVTLRPKIGLPGVAEKSRERLIRNTCEAVVLGALHPRTSITVVL
QVVSDAGSLLACCLNAACMALVDAGVPMRALFCGVTCALDSDGTLLLDPTAKQEKEARAV
LTFALDSVERKLLMSTTKGLYSDAELQQCLAAAQAASQHVFRFYRESLQRRYSKS
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atggagggagtgatgcagactgagactaagatccgcgctgagtctggaatagagtccggc
cctcggggttccggttgtagcctccggaactttgcctgcgaacagaatttgttgtcccgg
cccgatggctcggcttctttcctgcaaggggatacctccgtcctggcaggcgtgtacggg
ccagcagaggtgaaagtcagcaaagagatcttcaacaaggccacactggaggtgaccctg
aggccgaagatcggtctgcctggcgtagcggagaagagccgggagcggctgatcagaaac
acgtgtgaagcggtggtgctgggagctctgcacccccgcacctccataaccgtggtgctg
caggtcgtcagcgatgctggctctctcctggcctgttgcctgaatgccgcctgcatggca
ctggtggacgcaggtgtgcccatgcgggccctcttctgtggggtcacctgtgctctggac
tctgatgggaccctcctgctggaccccacagccaagcaagaaaaggaggcccgggcagtc
ctgacctttgcacttgacagcgtggaacggaagctgctgatgtccaccaccaaggggctc
tactctgatgctgagctccagcagtgcctggctgcagcccaggctgcctcccagcatgtc
ttccgcttctaccgggaatctctgcagaggcgttactccaagagctga
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