Lipotes vexillifer (Yangtze River dolphin): 103075047
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Entry
103075047 CDS
T03090
Name
(RefSeq) LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 1-like
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lve03021
]
103075047
03036 Chromosome and associated proteins [BR:
lve03036
]
103075047
Transcription machinery [BR:
lve03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
103075047
Chromosome and associated proteins [BR:
lve03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
103075047
SLIK complex
103075047
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Helicase_C
Chromo
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
103075047
NCBI-ProteinID:
XP_007469794
UniProt:
A0A340YCY3
LinkDB
All DBs
Position
Unknown
AA seq
1710 aa
AA seq
DB search
MNGHSDEESVRNSSGESSQSDDDSGSASGSGSGSSSGSSSDGSSSQSGSSDSDSGSESGS
QSESESDNSRENKVQAKPPKVDGAEFWKSSPSILAVQRSAMLKKQQQQHQASSNSGSEED
SSSSEDSDDSSSEVKRKKHKDEDWQMSGSGSPSQSGSDSESEEERDKSSCDETESDYEPK
NKVKSRKPQNRSKSKNGKKIIGQKKRQIDSSEEEDDDEEDYDNDKRSSRRQATVNVSYKE
DEEMKTDSDDLLEVCGEDVPQPEEEEFETIERFMDCRIGRKGATGATTTIYAVEADGDPN
AGFEKNKEPGEIQYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKRWLK
NASPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSWE
DGALISKKFQACIDEYFXXXXNQSKTTPFKDCRVLKQRPRFVALKKQPSYIGGHEGLELR
DYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTL
TSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDKAF
LGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMP
EKFSSWEDFEEEHGKGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQ
KQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQH
LIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGEL
RKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIG
QKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPSSSTPFNK
EELSAILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETHENEPGPLTVGDELLSQFKVA
NFSNMDEDDIELEPERNSKNWEEIIPEDQRRRLEEEERQKELEEIYMLPRMRNCAKQISF
NGSEGRRSRSRRYSGSDSDSVSERKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKFG
GPLERLDAIARDAELVDKSETDLRRLGELVHNGCIKALKDNSSGTERTGGRLGKVKGPTF
RISGVQVNAKLVISHEEELIPLHKSIPSDPEERKQYIIPCHTKAAHFDIDWGKEDDSNLL
IGIYEYGYGSWEMIKMDPDLSLTHKILPDDPDKKPQAKQLQTRADYLIKLLSKDLARKEA
QRLSGAGGSKRRKVRAKKNKAMKSIKMKEEIKSDSSPLPSEKSDEDDDKLSESKSDSKER
SKKSSVSDAPVHITASGEPVPISEESEELDQKTFSICKERMRPVKAALKQLDRPEKGLSE
REQLEHTRQCLIKIGDHITECLKEYTNPEQIKQWRKNLWIFVSKFTEFDARKLHKLYKHA
IKKRQESQQNNDQNSNLNTQVIRNPDVERLKENTNHDDSSRDSYSSDRHLSQYHDHHKDR
HQGDSFKKSDSRKRPYSSFSNGKDHRDWDHYKQDSRYYSDREKHRKLDDYRSRDHRSNLE
GSLKDRTHSDHRSHSDHRLHSDHRSSSEYTHHKSSRDYRYHSDWQLDHRASSSGSRSPLD
QRSPYGSRSPFEHSIEHRSTPEHTWSSRKT
NT seq
5133 nt
NT seq
+upstream
nt +downstream
nt
atgaatggacacagtgatgaagaaagtgttagaaacagtagtggagagtcaagccagtcg
gatgatgattctgggtcagcgtcaggctctggatctggttcaagttctggaagcagtagt
gatggaagcagtagccagtcaggtagcagtgactctgactctggatccgaatcgggcagt
cagtcagagtctgagtcagacaattcccgagaaaataaagttcaagcaaaaccaccgaaa
gttgatggagctgagttttggaaatcgagccctagtattctggctgttcagagatctgca
atgctcaagaagcagcagcagcagcatcaagcttcatctaatagtggatcagaagaggat
tcttctagcagtgaagattctgatgactcatcgagtgaggtcaaaaggaaaaagcataaa
gatgaagattggcagatgtctgggtcaggatctccatctcagtctggttcagattcagaa
tctgaagaagaaagagataaaagtagttgtgatgaaacagaatctgattatgagccaaaa
aacaaagttaaaagtagaaaacctcaaaatagatctaagtcaaaaaatggaaaaaagatt
attggacaaaaaaagagacagattgattcatctgaggaggaggatgatgatgaagaagac
tatgataatgataaaagaagctctcgtcgacaagcaactgtcaatgttagctataaggaa
gacgaagaaatgaaaacagattctgatgacctacttgaagtctgtggagaggatgttcct
caacccgaggaagaggaatttgaaacaatagaacggtttatggattgtcggattgggaga
aaaggagctactggtgctactacaaccatctatgcagttgaagcagatggtgacccaaat
gcaggatttgaaaaaaacaaggaaccaggagagatccagtatttaattaaatggaaagga
tggtcacatatccacaatacttgggagacagaagaaacccttaagcagcagaatgttaga
ggaatgaaaaaattagataattataagaaaaaagatcaggaaacaaaaagatggttgaaa
aatgcttctccagaagatgtggaatattataattgccagcaagaacttacagatgatctc
cataagcagtatcaaatagtggagcgaataattgctcattccaatcaaaagtcagctgct
ggctatcctgattattattgcaaatggcagggccttccatactcagaatgcagctgggaa
gatggagctctcatttccaaaaagtttcaggcgtgcatagatgagtatttcannnnnnnn
nggaatcagtcaaaaactactccttttaaagactgcagagttttaaaacaaaggccaaga
tttgtagccctaaagaagcagccatcctatattggaggacatgagggattagaattaaga
gattatcaactgaatggtttaaattggcttgctcactcttggtgcaaaggaaatagttgc
atactcgctgatgaaatgggccttggaaaaacaatacagacgatctcatttctgaactat
ttgtttcatgaacaccaattatatggaccttttctattagtagtaccactctccactctc
acttcctggcaaagggagattcaaacatgggcttctcaaatgaatgctgtggtttattta
ggtgacatcaacagcagaaacatgataagaactcatgaatggatgcatccccagaccaaa
cggttaaagtttaatatactgttaacaacttatgaaatcttattgaaggataaggcattc
cttggaggtctaaattgggcatttataggtgtagatgaagcacatcgattaaagaatgat
gattctcttctgtataaaactttaatagattttaagtccaatcaccgtctccttatcact
ggaactcctctgcaaaactccctcaaagagctctggtctttgctacatttcattatgcca
gaaaagttttcttcctgggaagattttgaagaagaacatggcaaaggcagagaatatggt
tatgcaagcctccacaaggagcttgagccatttctgttacgcagggttaagaaagatgtg
gaaaaatctcttcctgccaaggttgagcagattttaagaatggaaatgagtgctttacag
aaacaatattacaagtggatattaactaggaattacaaagccctcagcaaaggttccaag
ggcagtacctcaggctttttgaatattatgatggagctaaagaaatgttgtaaccattgc
tacctcattaaaccaccagataataatgaattctataataaacaggaggccttacaacac
ttaatccgtagtagtggaaaattaattcttcttgacaaactgttaattcgcctaagagag
cgaggcaatagagttcttattttttctcaaatggtgcggatgttagatatacttgcagaa
tatttgaagtatcgtcaattcccctttcaaagattagatggatcaataaaaggggagctg
aggaaacaagctctagatcattttaatgctgaaggatcagaggatttctgctttttgctt
tccacacgagctggaggtttaggaattaacttagcctcagctgacactgttgttatattt
gattctgattggaatccacaaaatgatcttcaggcacaggctagagctcatcgaattggg
caaaagaaacaggtgaacatttatcgtctagttacaaagggatcagttgaagaggatatt
cttgaaagggccaaaaagaagatggttttagatcatcttgtgattcaaagaatggacaca
actgggaagacagtattacacacaggttctgctccctcaagttctactcctttcaataaa
gaagagttatcagccattttaaagtttggtgctgaggaactttttaaggagcccgaggga
gaagaacaagagccccaggaaatggatatagatgaaatcttgaagagggctgaaactcat
gaaaatgaaccaggacctttaactgtaggagatgaattactttctcagttcaaggttgcc
aacttttcaaatatggatgaggatgacattgagttggaacctgaaagaaattcaaagaat
tgggaagaaatcattcctgaagatcaaagaagacgattagaagaggaagaaagacaaaag
gaacttgaagaaatttatatgctccccagaatgagaaactgtgcaaaacagattagtttc
aatggaagtgaagggaggcgcagtagaagtaggagatactctggatctgatagtgattca
gtctcagaaaggaaaaggccaaagaaacgtggaagaccacgaactatccctcgggaaaat
attaaaggatttagtgatgcagaaattcggcggtttatcaagagttacaagaaatttggt
ggccctctggaaagattagatgcaattgctcgagatgctgaattagttgataagtcagag
acagacctcagacgactaggagaattggtacataatggttgcattaaagctttaaaggac
aactcttcaggaacagaacgaacaggtggcagacttggaaaagtaaagggtccaacattc
cgaatatcaggagtacaagtgaatgccaagctagtcatctcccatgaagaagaattaata
ccattgcacaaatccattccttcagatccagaagaaagaaagcagtatatcatcccatgc
cacacgaaggcagctcattttgatatagactggggcaaagaggatgattccaatttgtta
attggtatctacgaatatggatatggaagctgggaaatgattaaaatggatcctgacctc
agtctgacacacaagattcttccagatgatcctgataaaaaaccgcaagcaaaacagtta
cagacacgtgcggactacctcatcaaattacttagtaaagatcttgcaagaaaagaagct
cagaggctttctggtgcaggaggttcaaaaaggaggaaagtgagagctaagaagaataaa
gcaatgaagtctataaaaatgaaagaggaaataaagagcgattcttctcccctgccctca
gaaaagtctgatgaagatgatgataagttgagtgaatccaagtctgatagcaaggaaaga
tctaagaaatcttcagtgtcggatgctccagttcatatcactgcaagtggtgaaccagtt
cccatatctgaagaatctgaagagctagatcagaagacattcagcatatgtaaagaaaga
atgaggcctgtcaaagcagctttgaagcaacttgataggcccgagaaaggcctttcagaa
agagaacaactggaacatactagacagtgcttaataaaaattggagaccatatcacggaa
tgtctgaaagagtatacaaatcctgaacaaatcaagcagtggagaaaaaacctgtggatt
tttgtatctaagtttactgagtttgatgcaagaaaattacataaattatataagcatgct
attaaaaaacggcaggaatctcagcaaaataatgaccagaacagcaacttgaatactcaa
gtgattcgaaatccagatgtggaaagattaaaagagaatacaaatcatgatgatagcagc
agggacagttactcatctgataggcacttatctcaatatcatgatcatcataaagaccga
catcagggagattcttttaaaaagagtgactctaggaaaagaccctattcttcttttagt
aatggtaaagatcatcgtgattgggatcactacaagcaagacagcagatactatagtgat
agagagaaacacagaaaactggatgattacaggagtagagaccacaggtcaaatttggaa
ggaagtttaaaagacagaactcattctgatcatcgttctcattcagatcatcggttgcat
tcagaccatcggtcaagttctgaatatacacaccataaatcttccagggattataggtat
cactcagattggcagttggaccatagagcttccagtagtggctctagatcaccactagat
cagaggtctccttatggctccagatctccatttgaacactcaattgaacacagaagtaca
cctgagcatacctggagtagtcggaaaacataa
DBGET
integrated database retrieval system
