Lipotes vexillifer (Yangtze River dolphin): 103075152
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Entry
103075152 CDS
T03090
Symbol
COL25A1
Name
(RefSeq) collagen alpha-1(XXV) chain
KO
K24356
collagen type XXV alpha
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
103075152 (COL25A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
lve00536
]
103075152 (COL25A1)
Glycosaminoglycan binding proteins [BR:
lve00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103075152 (COL25A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
103075152
NCBI-ProteinID:
XP_007452229
UniProt:
A0A340WYV3
LinkDB
All DBs
Position
Unknown
AA seq
673 aa
AA seq
DB search
MLVKKQAGKGGGREPGSEDRSPGGQRCARTVSPCAALAALLSVVAVISCLYLGVKTNDLQ
ARIAALESAKGDPSIRLLPDCLDQLKAVVQEKVERLLAQKSYEHMAKIRIAREAPSECNC
PAGPPGKRGKRGRRGESGPPGQPGPEGPPGPKGDKGEQGDQGPRMVFPKINHGFLSADQQ
LIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKPGEQGLMGPLG
PPGQKGSVGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGQPGERGEKGDAGENGPKGDTG
EKGDAGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGT
KGDRGEAGHPGRGDRGEPGAPGPKGKQGESGTRGPKGSKGDRGDKGDPGALGPRGPPGQK
GDQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPKGEPGSPGVPGVDGEQGL
KGSKGDMGDQGMPGEKGGIGLPGLPGANGMKGEKGDSGLPGPQGPSIIGPPGPPGPHGPP
GPMGPHGLPGPKGTDGPMGPHGPAGPKGERGEKGAMGEPGPRGPYGLPGKDGEPGLDGFP
GPRGEKGDLGEKGEKGFRGVKGEKGEPGQPGLDGLDAPCQLGPDGLPMPGCWQKVGFTEL
FLKEALSLSLHPA
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgctggtgaagaagcaagcagggaaaggaggggggcgggagccgggctccgaggaccgg
agcccaggcgggcagcgttgtgcccggaccgtgtcgccgtgcgccgccctggccgccctc
ctgtcagtagtggccgtgatatcttgtctgtacctgggggtgaaaaccaacgacctccag
gcgaggatcgccgccctcgaatccgccaaaggagacccttccatccgtctgctgcctgat
tgtctggatcagctcaaagcagtggtgcaagagaaagtggagcgacttctggctcagaaa
tcctatgaacatatggctaaaataagaatcgcaagagaagcaccttcagagtgcaactgc
ccagcaggccctccggggaaacgaggtaaaaggggccgaagaggagaatctggtcctcct
ggtcagcctggtcctgagggccctcctggtccaaaaggtgataagggagaacagggtgat
cagggacctcggatggtgtttcctaaaatcaatcatgggtttctctctgctgatcagcag
ctcattaaacgccgcctgattaagggtgaccaaggacaggctgggcctccaggccctcca
ggacctccaggcccacgaggacctcctggggacacaggcaaagatggcccccgcggaatg
ccaggagtgcctggtgaaccagggaaaccaggagaacaaggcttgatgggtcctctgggg
cctccaggacaaaagggttctgttggagcacctggaattccagggatgaatgggcaaaag
ggtgaacccgggttgcctggagcagtaggacagaatggaataccaggaccaaagggacaa
cctggagaacgaggagaaaagggagatgctggagagaatggccccaaaggtgatacaggt
gaaaagggtgacgctggatcgtccgctgcaggaattaagggagagcccggagaatctggt
cgtccagggcaaaagggtgaaccagggcttcctgggcttcctggacttccggggataaag
ggagaaccaggtttcattggtcctcaaggagaaccaggcttaccagggttaccaggaaca
aagggcgaccgtggggaggcagggcatcctggaagaggggatcgaggggagcctggagcc
cctggaccaaaggggaaacaaggtgaatcaggaactagaggcccaaaggggtcaaagggt
gaccgtggagacaaaggggaccctggagccctgggaccaaggggtccacctggtcaaaag
ggagatcaaggagccaccgagatcatagactacaatggcaacctccacgaagccttgcag
aggattaccaccttaacagtcacgggtccccctggaccacctggacctcaaggactacaa
gggccaaagggagaaccaggatctccaggagtcccaggagttgatggagagcagggactc
aaaggttcaaagggagacatgggggaccaaggtatgccaggtgaaaaaggaggaattgga
cttcctggattaccgggtgccaatggaatgaaaggagaaaaaggagactctggattgcca
ggtcctcagggtccttccatcataggcccaccaggcccaccaggtccccatggcccacca
ggccccatgggaccccatggacttcctggaccaaagggtacagatggccctatgggaccc
catggccctgcaggtcccaaaggagaaagaggtgaaaaaggagctatgggagagccggga
ccccgaggaccgtatggtcttcccgggaaagatggagagcctggtcttgatggtttccct
ggtccacgaggcgagaagggtgatctaggagaaaagggggaaaagggattccgtggcgtt
aagggggaaaaaggggagccaggccagcctggcctggatgggctggatgccccttgccaa
ttggggccagatggattacccatgcctggctgttggcaaaaggtaggctttacagaatta
tttctaaaagaagcactgtccctttctcttcacccggcctag
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