Lipotes vexillifer (Yangtze River dolphin): 103075842
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Entry
103075842 CDS
T03090
Symbol
SH3TC1
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lve04131
]
103075842 (SH3TC1)
Membrane trafficking [BR:
lve04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
103075842 (SH3TC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_8
TPR_2
TPR_NPHP3
TPR_7
Csd3_N
SH3_1
TPR_14
TPR_1
Motif
Other DBs
NCBI-GeneID:
103075842
NCBI-ProteinID:
XP_007456961
UniProt:
A0A340X6K8
LinkDB
All DBs
Position
Unknown
AA seq
1250 aa
AA seq
DB search
MGSYPTDLTLQLLAVQRKSGLPDPSLQQVLRGRLRLLENDSWEVARALGELSARLLSIHS
DQDRIVVTFKTFEEIWKFSTYHALGFTHHCLENLLVDQTFWLLEPDEDQETAIQVHVDEE
ALKLTHESLLFQEGPFFVLCPDHHVKVMTGLQPLRQASGFPRAEAALAVDSLDPSHNTSS
EEGTAVEPLIPFHQWALRVPWDPINDSMGGPVTQDIQPMAVGLASAVADCQGSGPEEMTF
RSGDHIEILGAQVPGLPWCLGRHVASGQIAFVQTSLISVRGQASDLENVIFLNEEERSFF
SSEGRFSEEDARQLLRRTSSTDVCTVYSLDTEEAEMQQQEEHEVPPPCLHPEPRETLQKV
KNVLEYTKSCRGCAKEPTSPGVHGASSGASSQDTKEPSFRLDAGDARADPEALGSLLQSL
DKPGFEAGFQGLYDLSPPGLRGMFGGFTDDEELARLLAEARGVAKKAGLPMALARLCFLL
GRLCVRRLKLSQARVYFEEALGALGGRFGDLVLVAAVYTSLAAVHLRQKNREKCAQVVPK
ALALLLGTPGHVGGSEAESGLLKLGLRRAIGARSPQAEARACFLLAEHHARSKRPEEALP
FLERLLQLHGTSGAPGASWPVDCYLLLADVYSRKCLPHLALSCVKVASRQARGSLDSALR
SAALVLRGSPQLPRLPAQLAPYLLQALASPASGTGRALRGPIYASLARLHSQHGRQGRAI
TFMTRAAETDAQIGGRTVVDRLVALAWLHVLHRQVPAALDILESVLEAAVAALDQEGVIA
NMAAVALKRMGRTQQAAEGYYRALRVARRLGRQRNKAVVLANFGTLCLQTGACRLAQHYF
LEAVKLFSRLPSRECGPDFTQVLLRLGHLCTRRALTRQGKCYYEWAFLVAVETDHLESQL
RAVQRLCHFYSTVMPSEAQCVVYHEFQLSLARRVADKVLEGQLLEAISQLYLSLGTERAY
KSALEYTKRSLGIFIDLHKKDKEARAWLQAGKIYYILQQNELVDLYIQVAQNAALYTGDP
MLGLQLFEAAGDIFFNGTWEREKAVSFYRDRALPLAVNTGSQEAELRLCNKLAALLAETE
APQEGLEFAHTALALSVTLGDRLNERVAYHRLAALHQQLGHGELAEHFYLKALSLCASPL
EFDEETLYYVKVYLVLGDIIFYDLKDPLDAAGYYQLALAAAVDLGNKKAQMKIYARLAAV
YHNFLLDREKSLFFYQKARTFATELNIRRGRLAPGRCCGRAAWLVPGPPS
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atgggctcctaccccacagacctgactttgcagctgctggctgtgcagaggaaaagcgga
ttgcccgaccccagcctgcagcaggtcctgcggggccggctccgtcttctggagaatgac
agctgggaggtggcccgtgctctcggggagctatcagccaggctgctgtccatccacagt
gaccaggatcggattgtggtgacgtttaagacttttgaagaaatctggaagttttccacc
taccatgctctcggcttcactcatcactgcctggaaaacctgcttgtggaccagaccttc
tggctgctcgagcctgacgaagaccaggagacggccatccaagtccacgtggatgaggag
gccttgaagctgacgcacgagagcctccttttccaggaagggcctttctttgtgctgtgt
cctgaccaccatgtgaaagtgatgactggcctccagcccctcaggcaggcttcggggttt
ccccgggcagaggcggccctggcagtggactctttggaccccagccacaacacgtcctca
gaggaggggacagccgtggagcctttgattccgttccatcagtgggctcttagggtcccc
tgggaccccatcaacgactccatgggtggacctgtgacgcaggacatccagccaatggct
gtgggcctggcctcggccgtggcggactgccagggctcagggcccgaagagatgaccttc
cgaagcggtgaccacatcgagatactgggcgcccaggtgcctggcctgccctggtgcctg
ggccggcacgtggcctccggccagatcgcctttgtgcagacgagcctcatcagtgtgcgg
ggccaagcgtctgacttggaaaatgtgatttttctcaatgaagaggaaaggtctttcttc
agcagcgaaggacgcttttctgaggaggatgccaggcagctactcaggaggacgtccagc
acggacgtctgcactgtgtacagcttggacacagaagaagctgagatgcagcaacaggaa
gaacatgaggtgcccccgccttgcctgcacccagagccacgtgagaccctgcagaaggtg
aagaacgtcctagaatacaccaagtcctgccggggctgcgccaaagagccaacgtccccg
ggcgtccacggggcgtccagtggtgcgagctcgcaggacaccaaggagccctccttccgc
ctggacgccggggatgcccgtgctgacccggaggccctgggctccctgctccagtccctg
gacaagcccggcttcgaggccggcttccagggcctgtatgacctctccccgcccggcttg
cgcggcatgtttggcggcttcaccgacgatgaggagctggcccggcttctggccgaggcc
cggggcgtggccaagaaggctgggctgcccatggccctggccaggctctgcttcctgctg
gggcggctgtgtgtccggcggctgaagctgtcccaggcccgcgtgtacttcgaggaagcc
ctgggggcgctggggggccgcttcggagaccttgtcctggtggcggccgtgtacaccagc
ctggccgccgtccacctacggcagaagaacagggagaagtgcgcgcaggtggtgcccaag
gccttggccctgctcctggggacgcccggccacgtcggcggctccgaggccgagtcgggg
ctcctgaagctgggcctgcggagggctatcggtgcccgcagcccgcaggccgaggcccgg
gcctgcttcctgctggccgagcaccacgcccgcagcaagcggcccgaggaggccctgccc
ttcctggaaaggctgctgcagctgcacgggacctcgggggctccgggcgcctcgtggccc
gtagactgctacctgctgctggcggacgtctacagccgcaagtgcctcccacacctggcg
ctgagctgcgtcaaggtggcctcgcggcaggcgcggggctcgctggacagtgcgctccgg
agcgcggccctggtcctgcggggcagcccccagctcccccgcctccccgcccagctcgcc
ccctacctcctgcaggccctggcctccccggcctcgggcacggggcgggcgctgcgcggc
cccatctatgccagcctggcccggctgcacagccagcacgggcgacagggcagggccatt
accttcatgacgcgggccgcggagacggacgcccagattggcggccgcacggtcgtggac
cgcctggtggccctcgcctggttgcacgtgcttcacaggcaggtcccggcagccctggac
atcttggagtctgtcctggaggcggcggtggccgccctggaccaggagggcgtgatcgcc
aacatggcagctgttgccctgaagaggatgggcaggactcagcaggcggccgagggctac
taccgcgccctgagggttgccaggcgcctgggtcgccagcggaacaaggcggtggtcctg
gccaacttcgggaccctgtgcctgcagaccggcgcctgcaggctggcccagcattacttc
ctggaggccgtgaagctcttctcgcggctgcccagcagagagtgcggcccagacttcacc
caggtgctcctgcggctgggtcacctgtgcacccgcagggccctcacccggcagggcaag
tgctactacgagtgggcctttctggtcgccgtggagacggaccatttggaaagccagctg
cgcgccgtccagcggctgtgtcacttttacagcacagtcatgcccagtgaggcccagtgc
gtcgtctaccacgagttccagctttcgctggcccgcagggtggccgacaaggtgctggag
gggcagctcctggaggccatcagccaactctacctgtccctgggtaccgagagggcctac
aaatccgcgctggaatacaccaagcgcagtctggggatattcatcgacctgcataagaag
gataaggaggcacgcgcctggctgcaggcagggaagatctactacatcctccagcagaac
gagctggtggatctctacatccaggtggcgcagaacgcggccctgtacacgggggacccc
atgctggggctgcagctctttgaggcggctggagacatattcttcaacgggacctgggag
cgggagaaagccgtgtccttctaccgggaccgggcgctgcccctggccgtgaacacgggg
agccaggaggccgagctgcggctctgcaacaagctggcagcgctgctggccgagacagag
gcgccgcaggagggcctggagttcgcccacacggccctggcactcagcgtcaccctaggg
gaccggctgaacgagcgggtggcctaccatcggctggccgccctgcaccagcagctgggc
cacggggagctggccgagcacttttacctcaaggcgctctcgctctgcgcctcgccactg
gaattcgacgaggagaccctctactacgtgaaggtgtatctggtgctcggcgacatcata
ttctacgacctcaaggacccgctcgacgcggccgggtactaccagctggcgctggcagcg
gccgtggacctgggcaacaagaaggcgcagatgaagatctacgcgcgcctggctgccgtc
taccacaacttcctcctggaccgggagaagtccctgttcttttaccagaaggctcggacc
tttgccaccgagctcaacatccgccggggacgcctggcccctgggcggtgctgcgggcgg
gcggcctggctggtccccgggcccccgtcctga
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