Lipotes vexillifer (Yangtze River dolphin): 103075925
Help
Entry
103075925 CDS
T03090
Symbol
CHD9
Name
(RefSeq) LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 9
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lve03036
]
103075925 (CHD9)
Chromosome and associated proteins [BR:
lve03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
103075925 (CHD9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
103075925
NCBI-ProteinID:
XP_007459529
UniProt:
A0A340XJR8
LinkDB
All DBs
Position
Unknown
AA seq
2887 aa
AA seq
DB search
MTDPMMDFFDDANLFGETLEGLSDDAFVQPGPVSLVDELNLGAEFEPLHIDSLNHVQGTP
THQKMTDYEQLNQFDSMKFHQVNQSFGSPAEHVLSPHSQFNCSPIHPQNQPNGLFPDVAD
GSPMWGHQTATSISSQNGSPFHQQGHSHSMHQTKSFVAHHDFALFQANEQQTQCTSLRSQ
QNRNNLNPGQNSLSQSKNFMDVNVSGPHRVSVNHPPQINNASTSQQSLSIQQFSQTSNPS
VHFLKCSNHQEGNFNGPSPNMTSCSVSNSQQFSSQYSFSSNHVSPNSLLQSSAVLAPNHT
NQTLSDFTGSNSFSPHRGIKQESTQHMLNPNTSLHSSNFQMLHSSHPQGNYSNSKLSPVH
MNFPDPVDSGTQMGHFSDHVETNGFSSLEENLLHQVESQTEPFTGLDPEDLLQEGLLPQF
DESAFGQDNSSHVLDHDLDQQFTSHLVTRPSDMAQTQLHTQARSWHSSLSNHQHLHDRNR
LCLQRQPPSSKKSDGSGTYTKLQNTQVRIMSEKKQRKKVESESKQEKANRIISEAIAKAK
ERGERNIPRVMSPENFPSASVEGKEEKKGRRMKSKPKDKECKKTKTCSKLKEKTKIGKLI
ITLGKKQKRKNESSDEISDAEQVPQHAFKEEDSQKRRSNRQIKRKKYAEDAEGKQSEEEV
KGSIKIKKHSAPLPGEQPLQLFVENPSEEDAAIVDKILSSRIIKKEISPGVMIDTEEFFV
KYKNYSYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYVEVDRV
LEVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDLAKIEEFEQLQASRPDTRHLD
RPPSNIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITF
LYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHGSLISRQMIQQYEMYFRDS
QGRIIRGAYRFQAIITTFEMILGGCGELNAVEWRCVIIDEAHRLKNKNCKLLEGLKLMNL
EHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDLKTEEQVQKLQAILKPMM
LRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLSKGAGQTNVPNLVNTMM
ELRKCCNHPYLIKGAEEKILGEFRDTYNPAASDFHLQAMIQSAGKLVLIDKLLPKMKAGG
HKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCT
RAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLVTRNSYEREMFD
RASLKLGLDKAVLQSMSGRESNVGGIQQLSKKEIEDLLRRGAYGAIMEEEDEGSKFCEED
IDQILLRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAEIDIDAIS
GRNSLVIDTPRIRKQTRPFSATKDELAELSEAESEGDEKPKLRRPCERSNGYGRTECFRV
EKNLLVYGWGRWREILSHGRFKRQLNEHDVEIICRALLAYCLVHYRGDEKIKGFIWDLIT
PTEDGQTRELQNHLGLSAPVPRGRKGKKVKTQTSSFDIQKAEWLRKYNPEQLLQDEGYKK
HIKHHCNKVLLRVRMLYYLKQEVIGNECQKVFDGVDASDIDVWVPEPDHAXXXXXAEWWD
FDADKSLLIGVFKHGKXEVRXVESSSTYSVIQRVGKPDEKAVAAEQRANDYMDGDVEDPE
YKPAPAIFKDDIEDDVSSPGDLIIADGDGQLMEGDKIYWPTQSALTTRLRRLITAYQRTN
KNRQIQQIQPTFSVPASVMQPLYEEATLNPKMAAKIERQQRWTRREEADFYRVVSTFGVV
FDPDRGQFDWTKFRAMARLHKKTDDSLEKYLYAFMSMCRRVCRLPSKDELVDPNIFIQPI
TEERASRTLYRIELLRKVREQALRHPQLFERLKLCHPNPDLPVWWECGPHDRDLLIGAAK
HGVSRTDYHILRDPELSFMAAQRNYSQSKMAHSRTSTPLLQQYQVALSASPLTSLPRLLD
PKGIILEDVKVKSENLKEEPQFSEEESMTSEETRTLIKSEPVSPKNGVLPQATGDQKSGG
KGETDRRMVAARTEPLTPNPASKKQRVHKRGSESSSDSDSDSERSSCSSRSSSSSSSSSS
CSHSRSGSSSSSSSSCSSASSSSSSSSSSSSSSSSSSSEESDSEEEEVQKREGTPHVKAY
DEESVASLSTTQDETQDSFQMNNGTPESAYILQGGYMLAASYWPKDRVMINRLDSICQTV
LKGKWPSARRSYDANAVASFYTTKLLDSSGAATEYSEPSVPTPAGAGVKEEHDQSTQMSK
EGGLKLTFQKQGLAQRRPLDSEDGALGQQQYLTRLRDLQGASETSLTSFPKSMPVSGTPI
QSALGANGVLLDNQPVVKKRRGRRKNVEGVDILFFNRNKPPNHVTLGLTTSQISTGINPA
LSYTQPQGIPDTESPVPVINLKDGTRLAGDDAPKRKDLEKWLKEHPGYVEDLGAFIPRMQ
LHEGRPKQKRHRCRNPNKLDVNSLTGEERVQLINRRNARKVGGAFAPPLKDLCRFLKENT
EYGVAPEWGDVVKQSGFLPENMYERILTGPVVREEVSRRGRRPKSGIAKATAAAAAATAT
SISGNPLLANGLLPGVDLTTLQALQQNLQNLQSLQVTAGLMGMPPGLSSGGEAKNVAAMF
PMLLSGMTGLPNLLGMGGLLTKPTESGTEEKKGNDSTELEGKKERTESQNSENGGESSVS
SSPSTSSTAALSAAAAANPLALNPLLLSNILYPGMLLTPGLNLHIPTLSQSNTFDVQKNK
NSDLGSSKSVEVKEEDSRVGDQEDKGGTEPSPLNENSTDEGSEKADASSGSDSTPSSSED
SDSSNED
NT seq
8664 nt
NT seq
+upstream
nt +downstream
nt
atgacagatccaatgatggacttttttgatgatgccaatctgtttggtgagaccttagaa
ggtttgtcagatgatgcatttgtacaaccaggacctgtttcactagttgatgaattgaac
ttgggtgcagaatttgaacctttgcacatagactcactgaaccatgttcaaggtactcca
acacatcagaagatgactgattatgaacagttaaatcagtttgattcaatgaaatttcac
caagttaatcagtcttttggtagcccagctgaacatgtgttatctccacactctcagttt
aactgttctccaatccacccacagaaccagcccaatggtttgtttccagatgtagcagat
ggcagtccaatgtggggccatcagacagctactagcatttcaagtcaaaatgggtctcct
tttcaccaacaaggacattctcactctatgcatcaaactaaaagctttgtggcacaccat
gactttgccttatttcaggccaatgaacaacaaacacagtgcacttcgctacgctcacag
caaaaccgaaataatcttaacccagggcaaaattctcttagccagtctaaaaattttatg
gatgttaatgtttctggtccacacagagtcagtgttaaccatccaccacaaattaataat
gcatctacttcacaacagtccctttcgatacagcaattttctcaaacgtcaaatccttca
gtacacttcctgaagtgtagcaatcatcaagaaggaaattttaatggaccttctccaaat
atgacttcttgttctgtcagtaattcacagcagttttcttcacaatattccttttccagt
aatcatgtgtcaccaaatagtcttcttcagtcctctgcagttcttgcacctaatcataca
aatcagactttatctgattttactgggagtaattccttttcacctcataggggaatcaag
caagaatcgactcagcatatgctaaatcccaatacatcgctgcattcaagtaacttccaa
atgttgcattcatcacatcctcagggtaattacagcaattcaaaattatctcctgttcac
atgaacttcccagatcctgttgactcaggaactcaaatgggccatttcagtgatcatgta
gaaactaatggcttttcatctctagaagagaatttacttcatcaagtggaatctcaaact
gagccgttcacaggacttgacccagaagacctccttcaggagggtctccttccccaattt
gatgagtcagcatttggacaagataattcaagtcatgttttagatcatgaccttgatcag
caatttacttcgcatcttgtaacacggccttctgatatggctcaaactcagttgcatact
caggctcggagttggcattcatcactttctaatcatcagcatttacatgacagaaatcgc
ctatgtttacagcgacagcctccatcttccaagaagagtgatggttctgggacatatact
aagttgcagaatacccaggtgaggatcatgtctgagaagaagcagagaaaaaaggtggaa
tcagaaagcaagcaagaaaaggctaatcgtataatatcagaggccatagcaaaagcaaag
gagcgtggggaacgcaatattccacgagtaatgagccctgaaaactttcctagtgcttca
gttgaaggaaaagaggaaaagaaaggtagaaggatgaaatctaagccaaaggacaaagag
tgcaaaaaaacaaaaacttgttctaagttaaaagagaagacaaaaattggcaaactcatt
attacattgggtaagaaacaaaaaagaaagaatgagtcttcagatgaaatatctgatgca
gagcaggtgccacagcatgcattcaaagaggaagactctcaaaaaagaagatcaaatcga
caaattaaaagaaaaaaatatgcagaagatgcagaagggaaacaatctgaagaagaggtt
aaaggctctataaaaataaaaaagcattcagctcctttacctggtgaacagcctttacag
ttatttgtggagaatccgagtgaagaagatgctgcaattgtggacaaaatactatcttct
agaattataaaaaaggaaatatcacctggagtgatgattgatacagaagaattttttgta
aaatacaagaattactcctatcttcactgtgagtgggccacagaacagcagcttctgaaa
gataaaaggatccaacagaaaatcaaacgattcaaattgagacaagcacaaagagcacat
ttttttgcagacatggaagaagaaccatttaacccagactacgttgaagtagacagagta
ttagaagtctctttttgtgaagataaagatactggtgagcctgttatttactacttagta
aagtggtgctcattaccatatgaagatagtacttgggaactaaaagaagatgtagatctt
gcaaaaatagaagagtttgaacagttgcaagcttcacggcctgacacaagacatttggac
cgtcctccttctaatatttggaaaaaaatagatcaatccagggattataaaaatggcaat
caactcagggaatatcaactggaaggactcaactggctcttattcaactggtacaataga
cgaaactgcattttagcagatgaaatgggtcttggcaaaaccattcaatcaattacattc
ctctacgaaatccttctgactggtataagaggacctttcctgattattgctccactttct
actattgcaaactgggagagagaatttcgtacgtggactgatattaatgttgtggtttat
catgggagcctgattagcagacaaatgatacagcaatatgagatgtacttcagggactca
caggggcgaatcattcgaggagcttacagattccaagccatcatcaccacttttgaaatg
attcttggaggctgtggagagcttaatgcagttgaatggcgatgtgtgattattgatgaa
gcacataggttaaaaaataaaaattgtaaacttctagaaggtctgaaactcatgaatctg
gagcacaaggtgcttttgactggcacacctctccaaaatacagttgaagaactattcagt
cttcttcactttctggaacccttaaggtttccttctgaatcaacgttcatgcaagaattt
ggggatctgaaaacagaggaacaggtgcagaaacttcaggctatcttgaaaccaatgatg
ttgagacgattgaaagaagacgtggaaaagaagttggcacctaaggaagaaaccatcatt
gaagtggaacttactaacattcagaagaaatactaccgggctattctggagaagaacttt
tcgtttttatccaaaggagcagggcagactaatgtacccaacttggtcaataccatgatg
gagctcaggaagtgctgtaatcacccatatcttatcaaaggtgctgaggagaaaatactt
ggagaatttagagatacatataatccagctgcttctgattttcatcttcaagcaatgatc
cagtctgctggtaaattggtccttattgataaattgcttcctaaaatgaaagcaggaggt
cataaagtgctcatcttctctcagatggtacgctgccttgatatcctggaggactatctt
atacataaaagatatttatatgagcgaattgatggaagagtcagagggaatcttcgacaa
gctgctatagatcgatttagtaaacctgattcagatcgatttgtctttcttctgtgtacc
cgagctggtgggttgggcatcaacttaactgcggctgatacatgtataatttttgattct
gattggaatcctcaaaacgaccttcaggcccaagctcgttgccacagaatcggtcagaat
aaagcagttaaagtctaccgactagtaactcgtaactcatatgaaagagagatgtttgac
cgagccagtctgaaactgggtctagataaggctgtattacagagcatgagtggaagagaa
agtaatgttggtggtattcaacagctttccaaaaaggaaatagaagatctgcttcgaaga
ggtgcttatggtgccattatggaagaagaagatgaaggctctaaattctgtgaagaagat
attgatcagattttactacgtcgtacaaaaaccattacaattgaatcagaaggacgtggg
tcaacatttgccaaggcaagttttgtggcatctggaaatcgaacagatatttccttagat
gatcccaacttctggcagaaatgggcgaaaaaggcagaaatagatatagatgccatcagt
ggtagaaacagcttggttattgacactccaagaattaggaagcaaacaagacctttcagt
gctacaaaagatgaattggctgaattatctgaagctgaaagtgaaggagatgaaaagccc
aaactccggagaccctgtgagcgttcgaatggctatggaagaactgaatgctttagagta
gagaaaaatctgctagtttatgggtggggccgatggagagagattctgtctcatggccgt
tttaaaaggcagctaaatgagcacgatgtggaaataatttgccgagccctcttagcttat
tgccttgttcattaccgaggagatgagaaaattaaaggcttcatatgggatctcattact
ccaaccgaagatgggcagacacgagagctacaaaatcatctaggcctgtcagcccctgta
cccagaggtcgaaaagggaagaaagtaaagactcaaacaagctcatttgatatacaaaaa
gcagaatggcttcgaaaatacaatcctgagcagctacttcaagatgaaggctacaaaaaa
catataaaacaccactgtaataaagttttgcttcgtgtaagaatgctgtattatctaaag
caagaagtcattggaaatgagtgtcagaaagtgtttgatggagttgatgcaagtgacatt
gatgtttgggtcccagaaccagaccacgcnnnnnnnnnnnnnnntgctgaatggtgggat
tttgatgctgataagtcactccttattggagtttttaaacatggtaagtgagaagtaaga
taggtagagtcttcatctacatatagtgtaattcagcgagtgggaaaacctgatgagaaa
gcagttgctgcagaacagagggcgaacgattacatggatggggatgtggaagatccagaa
tacaaacctgccccagctatctttaaagatgatatagaggatgatgtttcctcaccagga
gatcttattatagcagatggagatggtcaactgatggagggtgataaaatttattggcct
actcagtcagctttaaccacacgtttgaggcgtctcatcactgcatatcagcgtactaat
aaaaacagacaaatccagcagatacaacctactttctcagtgcctgccagtgttatgcag
cctctttatgaagaagccactcttaatcctaaaatggcagccaagatagaaagacagcag
agatggacaagaagagaagaagctgacttttatagagttgtatctacatttggagtggtg
tttgatcctgacagaggccaatttgactggacaaaatttagagctatggctaggctacat
aagaaaactgatgatagtttggagaaatatttgtatgcattcatgtctatgtgtcggagg
gtttgtcgtcttccttccaaagatgaattggtggatccaaatatttttatccagccaatc
acagaagaacgtgcttctaggactttatatcgcattgaacttctaaggaaagtaagggaa
caggccctccgacatccacagttgtttgagcgcttgaagctttgccatccaaatccagac
ttaccagtctggtgggagtgtggccctcatgatagggacttgctcattggagctgctaaa
cacggggtgagccgaacagactatcacattcttcgtgatcctgaactctcatttatggca
gctcaaaggaactacagtcaaagtaagatggctcattcaaggacttctaccccactttta
cagcaatatcaagtagcactttctgcttctcctcttacctctctacctaggctcctagat
cctaaaggtattattctagaggatgtgaaagttaaaagtgaaaaccttaaagaggagcct
cagttttctgaagaagaatctatgacttctgaggaaaccaggacactaataaagtctgag
cctgtaagtccaaagaatggtgttttaccacaggctactggagaccagaaatctggtgga
aaaggtgaaacagacagacgcatggttgcagccagaacagagcctctaactccaaaccca
gcttctaagaagcagcgagtccacaagagaggatcagagtctagttctgattctgactct
gattctgagagatcgtcctgttcttccagatcatcttcttcctcgtcttcctcttcttct
tgttcccactctcgatcaggctctagctcttcttcttcctcctcttgttcttcagcatca
tcttcatcctcatcctcgtcctcctcttcctcatcatcctcctcatcttcatcagaagaa
agtgacagtgaagaagaggaagtccaaaagcgagaaggtacccctcacgtgaaagcctat
gatgaagagagtgtcgcatcactgagcactacccaggatgagacccaggatagtttccag
atgaacaacgggaccccagagtctgcttacatcctacaaggtggatacatgctggcagct
tcatactggccaaaggaccgtgtgatgatcaaccggttggacagtatttgtcaaacagtc
ctgaaagggaagtggccttcagctagaagaagttatgatgccaatgcagtggcttctttc
tataccacaaagctgctggacagctctggcgcagctacagaatatagcgagcccagcgtg
cccactcctgcaggtgctggcgttaaagaagaacacgatcagtcaacacagatgtcaaag
gaaggtggtttgaagttgacatttcagaagcaagggcttgctcagagaaggccgttggac
agtgaagatggtgctctagggcagcagcagtacctcactcgacttcgggaccttcaaggt
gcgtcagagaccagcctcaccagttttccaaaatccatgccagtatcaggtactcccatt
caatcagcccttggtgccaatggagttttattagacaaccagcctgtagtcaaaaaaagg
cggggaaggaggaagaatgtagaaggtgttgacatcctctttttcaacagaaataaacca
cctaatcatgttactttaggcttaaccacctcacagatttctacagggataaatccagca
ctgtcctatactcaacctcaaggaattcctgatacagaaagtcccgttccagttattaat
cttaaagatgggacaagacttgcaggcgatgatgcaccgaagagaaaggatttggaaaaa
tggcttaaggagcacccaggttatgtggaagatttaggagcttttattcctagaatgcag
ctccatgaggggagacccaagcaaaaaaggcatcgttgcagaaaccccaataaactagat
gtgaatagtctcactggagaagaacgtgttcagctgattaacagaagaaatgccagaaag
gttggaggtgcctttgctccccctctgaaagatttatgtcggttcctgaaagaaaataca
gaatacggagtagctcctgaatggggagatgttgttaagcagtctggatttcttccagaa
aatatgtatgaacgtattctcactggtcccgttgtgagagaggaagtaagcaggcgaggg
agacggcctaaaagtggaattgcaaaggccactgcggcagcagcagctgcaactgccacc
agtatttcaggcaatcctttattagccaatggattacttccaggtgtggacctcacaact
cttcaggccttacaacaaaacctacaaaacttgcagtcactgcaagtaaccgcagggctg
atgggaatgcctcctggcctttcttctggaggagaagctaaaaacgtggctgccatgttc
cccatgctgctgtcaggaatgactggattgccaaatctgttgggcatgggaggactcctg
acaaagcctacagaatctggaacagaagaaaaaaagggaaatgactctacggagctagaa
ggaaaaaaagaaaggacagagagccaaaattcagagaatggtggcgaaagctctgtgtca
agttctccttcaacatcctctactgctgcattaagtgcagctgcagctgccaacccgtta
gctcttaacccactattactatctaatatactttatccagggatgcttctcactccaggc
cttaatcttcatattccaactttgtcccagtccaatacttttgatgtacagaaaaataaa
aacagtgacttaggctcgtctaagtctgtagaagtaaaggaagaagattccagagttgga
gatcaggaagacaaagggggaactgaaccgagtcctctcaatgaaaacagcacagatgag
ggttcagagaaagccgatgcttcatctggatctgatagtacaccatcgtcatccgaggat
tcagattctagtaatgaagactga
DBGET
integrated database retrieval system
