Lipotes vexillifer (Yangtze River dolphin): 103076029
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Entry
103076029 CDS
T03090
Symbol
EXOSC10
Name
(RefSeq) exosome component 10 isoform X1
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103076029 (EXOSC10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lve03019
]
103076029 (EXOSC10)
Messenger RNA biogenesis [BR:
lve03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
103076029 (EXOSC10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Motif
Other DBs
NCBI-GeneID:
103076029
NCBI-ProteinID:
XP_007463217
UniProt:
A0A340XSP4
LinkDB
All DBs
Position
Unknown
AA seq
885 aa
AA seq
DB search
MALSSPRESKAQSATSATKSDGEMVLPGFPDADSFVKFALGAVVAVTKASGGLPQFGDEY
DFYRSFPGFQAFCETQGDRLLQCMSRVMQYHGCRSNIKDQNKVTELEDKFDLLVDANDVI
LEXXGILLDEASGVNKNQQPVLPAGLQVPKTIVSSWNRKAGEYSKKTKCETFRLLHAKNI
IRPQLKFREKIDNSNTPFLPKIFIKPNAQKPLPQALSKERRERPQDRPEDLDVPPALADF
IHQQRTQQVEQDMFAHPYQYELDHFTPPDSVLQKPEPQLYRPVGETPCHFVSSLDELVEL
SEKLLKCQEFAVDLEHHSYRSFLGLTCLMQISTRTEDFIVDTLELRSDMYILNESLTDPA
IVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGRHSLDHLLKLYCNVESNKQYQ
LADWRIRPLPEEMLNYARDDTHYLLYIYDKMRLELWERGNEQPTQLQVEWQRSRDICLKK
FIKPIFTDESYLELYRKQKKHLNTQQLTAFQLLFAWRDKTARREDESYGYVLPNHMMLKI
AEELPKEPQGIIACCNPVPPLVRQQINEMHLLIQQAREMPLLKSEVAAGVRKDGPPPNPE
RLENALFGPHDCSHAPSDGCPLIATNGPVPVQKQEGLPTAREAEEALPDTGCLIATAVIT
LFNEPSAEENGKGPLTVAQKKAQNIMESFENPFRMFLPSLESRAHVSQTAKFDPSSKIYE
ISNRWKLASQVQVQKESKTAKKKAAEQTAARDQAKEECRAAVEQAVSVRQQAALENTAKK
RERTSDPGTTEQKQDKKRLKISKKLKDPDPPEKDFTPYDYSKSDFKAFAGDSKPTPSSQF
DPNKQPQSGKKYTAAKKIKQSMGNKSMSFPTGKSDRGFRHNWPKR
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atggcgctttccagtccccgagagtccaaggcccagtcggcgacaagcgctaccaagtct
gacggggagatggtgctgcccggcttccccgatgcagatagcttcgtgaagtttgctctt
ggggcagtggtggcagtcaccaaggcatctgggggcctaccacagtttggtgatgagtat
gatttttaccgaagttttcctggcttccaggcattttgtgaaacacagggagacaggttg
cttcagtgcatgagtagggtaatgcagtaccatggatgtcgaagcaacattaaggatcag
aataaagtgactgagctggaggacaagtttgatttgctagttgatgccaatgatgttatt
ctggaannnnagggcattttactggatgaagcatccggtgtgaataagaatcaacagcct
gtcctccctgcaggattgcaggtccctaaaaccatagtgtccagctggaaccggaaggca
ggagaatatagcaaaaaaacaaaatgtgaaacattccggctgcttcacgcaaaaaacatc
atccgacctcagcttaaattccgagagaagattgacaattccaacacgccatttcttcct
aaaatcttcatcaagcccaatgctcagaaacccctccctcaggcactctctaaagaaagg
agggagcgcccacaggaccgacctgaggacttggatgtcccccctgccctggcggatttc
atccaccagcagagaacccagcaggtggagcaggacatgtttgcacatccttatcagtac
gaactagatcacttcactccaccagactcagtccttcaaaagccagagcctcagttatac
agacctgtaggagagacaccctgccactttgtgtcctcgctggatgaactagtggaactc
agtgaaaagctcctgaagtgtcaagaatttgctgtagacttggagcaccactcttaccgg
agcttcctagggctcacctgcctgatgcagatttccacccggacagaagacttcatcgtt
gacaccctggagcttcgcagtgacatgtacattctcaatgagagcctcacagacccagct
attgttaaggtcttccacggtgctgattcagacatagaatggctacagaaggactttggg
ttgtacgtggtgaacatgtttgatacccatcaggcagcacgccttcttaacctgggcagg
cactccctcgaccatctgctgaagctctactgcaacgtggaatcaaacaagcagtatcag
ctggccgattggagaataagacctctgcctgaggaaatgctcaactatgcccgagacgac
actcattacctgctttacatctatgataagatgaggctggagctgtgggagcgtggcaac
gagcagcccacgcagctgcaggtggagtggcagcggagccgtgacatctgcctcaagaaa
ttcatcaaacctatcttcacggatgaatcttacctggaactgtatagaaagcaaaagaaa
cacctcaacacacagcaactaacggcctttcagctgctgtttgcctggagggataaaaca
gctcgcagggaagatgaaagttatggatatgtcctgccaaaccatatgatgctaaagata
gctgaggagctgcccaaggaacctcagggcatcatagcctgctgtaaccctgtgccacct
cttgtacggcagcagatcaatgaaatgcatcttttaattcagcaggcgcgagagatgccc
ctgctcaagtctgaagttgcagctggagtgaggaaggacgggccaccgcccaaccctgag
agattggagaatgctctcttcggcccccacgactgctcccacgccccatcagacggctgt
cctcttattgcaaccaatgggcctgtgccagtgcagaagcaggagggcctccccactgcc
cgagaagcagaggaggccctgccggacaccggatgccttatcgctaccgctgtcatcacg
ttatttaacgaacctagtgctgaagaaaatggaaagggtccattaacagttgcacagaaa
aaagcccagaacataatggagtcctttgaaaatccatttcggatgtttctgccttcacta
gaatcccgagctcacgtttctcagacagcaaagttcgatccatcttcgaaaatctatgaa
atcagcaaccgttggaagctggcaagccaggtacaggtacaaaaagaatctaaaactgcc
aagaagaaggcagctgagcaaacagctgcccgggaccaggccaaggaggagtgcagagca
gcagtggagcaggccgtgtccgtccgccagcaggctgccctagagaacactgccaagaag
agggaacgaacaagtgacccggggacgacagaacagaaacaagacaagaaacgactcaaa
atttccaagaagctaaaagacccagatccaccagaaaaagatttcaccccatatgactac
agcaagtcggatttcaaggcttttgctggagacagcaaacccacaccttcttcccagttt
gacccaaacaagcagccacagtctggcaagaaatacactgcagccaaaaaaattaaacag
tcgatgggaaacaaaagcatgtcctttccaactggaaagtcagacagaggtttcaggcac
aattggccaaagagatag
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