Lipotes vexillifer (Yangtze River dolphin): 103076090
Help
Entry
103076090 CDS
T03090
Symbol
PKD1L2
Name
(RefSeq) LOW QUALITY PROTEIN: polycystic kidney disease protein 1-like 2
KO
K04988
polycystin 1L2
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lve04040
]
103076090 (PKD1L2)
Ion channels [BR:
lve04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
103076090 (PKD1L2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Polycystin_dom
PLAT
Gal_Lectin
Lectin_C
GPS
REJ
Motif
Other DBs
NCBI-GeneID:
103076090
NCBI-ProteinID:
XP_007452617
UniProt:
A0A340WY87
LinkDB
All DBs
Position
Unknown
AA seq
2143 aa
AA seq
DB search
MSTLALVLLGLALGFRAITAKPEDGSFCSKSQVAFRDDCYEFVPLGRTFYDVQSWCEEQV
GHLVFIPGEATQLFLQKHLTQDRERWIGLTWNLAWNDTTEGSGIWLDNSNVSYSHWRRGQ
DASVTKPWGYNGRDPSFGXLPSDNCTQEFTFICEFGVGQSLACESLNATMHCGSGEVIQI
QDAFYGRQTPLYCIQDAGDPSDLEEECSWVSVKDEVAGRAQGLCSSGCKGLQACQVAADG
TYFGDLCPTWGSYLWVQYHCREGKPESFIFDNVTISLTWLFCPYIGNLSCIINMGDGHTF
DPYYPTSLSSSVFHQFTAPGEFTVFVECTTSEWNVIAQKQVTMXDKMERLCVTGCSGLST
SGTSPLCWAVFRDPLWIQVELDGGTGVTYTVLSGNTTLADFTTQRGPLPYSVTLGGAVQQ
RMGPGMHHMEIXATSNTTTSAPSRNITIYFVEPLSGLQASWASGNLELGQDLLVNVSAAH
GIPERLTSEVAGLNATFSHEKESLGGPFGTHHVAVPLEGTFLVTVLVRNAFSNLSLKIGS
ITVTAPFSLQEPPGTKAQKKNRDRGDVELCVEPSQYLDSFTTVTLGWPDSNKDFRFQWAC
GHCWAQWSDYVERQLLCTDQRELVVPPSCLPMPDSAVTLRLAVWRGQELQNLEKQCLCVS
APLELRLRVSCEENCRPVNASRDVMLKVTVGDKSAAAVFSWYLDDTPLEKAEPLPAACRL
QGFWPRSLILLQSDTATLLLNSSFLRTRSQATGTRVRVATRRAYREGTYVISSLPLPEVP
TCTTAPEEGIVLMSFAIFCNASAARGXLEYRFCLESGSCLHCGPEPALPSVHLPLGAENN
DFMLTVVISVCNHVGDXEQTQAAVKAGRGGTHVEDEAFQATVWDNVTATLQGGHGPEQLF
QLARSVSSVLDQQAKGQGPGSGQPLRVDASRKVHLLSAGSLPAVSTTLGDMQKVQELAEA
LKEVTRRSEEPMPLAQREASRALQHASEAPLAVSAEAHAEDQRHQEATGDLFQAVCSVLE
ASLRDRPEEPAGANGSQVAVVPQLLGAVGHMQATVLRGVLPGGLPATLAAPSISVYTNRI
QPRSXRGSPVHVAAASSATFTLPAAPSLGSMEDGRVPVDIRMKSFPKNPFPAPSHFDVSG
TVGGLSLTSPSGQLIPVKNLSEDIEILLPQLSEGHSEPTVLNLTRPEALWVNLTXGGVAL
GIQLHWRPDIPLMLSLGYGYHPSVTSDDAQAHLLPTAIPDGLSTWILSPEDLHFGEGIYY
LTVIPESDLEPAPGRDFTVGITTFLSHCVFWDEVQGSWDNSRCQVGPRTTRSQIHCLCNH
LTFFGSTLLVMPNAVDVRQTAELFATFADSLVVVTTIGCLCVAYVLVVIWVRRKDAQDQA
KVKVTVLEDNDPFAQYHYLVTVYTRHRRGAAASSKVTVTLYGLDGESEPHHLSDPDIPGF
EGGGVDVFLPSTLLPLGELRGLRLWHDNSGDQPSWYVSRVLVHDLAMDQKWYFLCNSWLS
INVGDCVLDKVFPVATEQDRSKIEFTWQEVMIELDDWIGLLMFPINLLIVQIFWNSRPWV
TKEQNTGKRDGGPLSLAPSPQPVEDGLLTPEAVTKDLWRLVSSLFKALKVPPPCSGWDFV
NSMDINQLLALVEDVVCQQNKAGQVFWKEASQTGGPLTLTLEAVQVKEEMQCPRPEVGPR
DTGKDSAYRQCLYLQLEHLEQELLLLEPQGFSQVQSHTQALGXLQTLKGCLGGQPGTPPP
AHSLGSLQVSKSPXGLPCWCVLVGWLLVAAFFTRLYGLHYRRASPLRWLISRAVPFVESV
FVTQPLKVLGFAAFFALVLKTVEDEEEPVAPLPGRVSGPDPSALFQARRNSRRDIYQKPL
ASDVEKMKTTHLKEQKALALIREILAHLGSLWMPLLVAYGQGDPSAYHFNRHLGHSFTRG
FSAMLDFQDLFTWANTTLVSNLDSHHPGFITDGNSKPVGSAQIRQVRVQESSCAFALQLQ
ASLDGCHVPYSLDVEDLSHYGEGWNASVLNNSNDFSQAWQYQSQSQSQSQRRGYPIRGXL
AVYRGGGYMVPLGTDRQSASRSPGTGLVNCQPKRDCDSCSCCLPKPLMLYLSEEGEIVDL
LLMKILXFLGIKCKRQEPGNSSEQPELLSEAWAPQPLSAVPQI
NT seq
6432 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccttggccttggtacttttggggcttgccctggggtttagggccattacagct
aagccagaggatggcagcttttgctctaagagccaagtggctttcagagatgattgctat
gaatttgtgcctctcggccgcaccttctatgatgtccagagctggtgtgaggagcaagta
ggccatttggtttttattcctggtgaagccacccagctatttctgcagaagcacctcacc
caggacagggaacggtggattggactcacatggaacttggcttggaatgatactacagaa
ggtagtgggatctggctggacaactcaaatgtgagctacagccactggcgccgagggcag
gatgcttctgtaaccaaaccctggggctacaatgggagagacccttcctttgggtagttg
ccctcggacaactgcacgcaggagttcaccttcatctgcgagtttggtgtcggccagagt
ctggcctgcgagagcctcaatgccaccatgcactgtggctcaggggaggtgatccagatc
caggatgctttctatgggcgccagactcccctttattgcatccaggacgccggggacccc
tcagacctggaggaggaatgcagctgggtcagcgtcaaggacgaagtggcaggtagggcc
caagggctctgtagctctggctgcaaggggctgcaggcctgccaggtggcagcagatggg
acctactttggagacctgtgccccacctggggcagttacctgtgggtgcagtaccactgc
cgggaagggaagcccgagagtttcatctttgacaatgtcaccatctcccttacatggctc
ttctgtccctacattggaaacctgtcctgtataattaatatgggggatggccacactttc
gatccctactaccccacaagtttgtccagcagcgttttccaccagttcacagcccctggg
gaattcactgtgtttgtcgagtgtacaaccagcgagtggaacgtgatagctcagaagcaa
gtgacgatgtgagacaagatggagaggctctgtgtgactgggtgttctggcctgtccaca
tcaggaactagccctctctgctgggcagtcttcagggaccctctgtggattcaggtggag
cttgatggaggaacaggggtgacttacactgtgctgtcaggtaacacaaccctggctgac
ttcaccacgcagaggggcccgctcccctacagtgtgacgctgggtggagcagtccagcaa
cggatgggcccagggatgcaccacatggaaatctgagccaccagcaacaccaccacctct
gccccctccagaaacatcaccatctacttcgtggagcccctgtcaggcctgcaggcctcc
tgggcttctggcaacttggagcttggacaggacctactggtcaatgtctcggcggctcac
ggtatcccggagaggctgacctctgaggtggcaggactcaatgcaaccttctcccatgag
aaagagagccttggggggccatttgggactcaccacgtggcagttcctcttgaaggcacc
tttctggtcactgtgctggtgaggaacgccttctcaaacttgagtttgaaaattggaagc
atcactgtcacagctcctttcagtctccaagaaccacctggaacaaaggctcagaaaaag
aatagagatagaggggatgtggagctgtgcgtggaacccagtcagtacttggattctttc
acgacagtgactctgggctggccagatagtaacaaggactttcgcttccagtgggcatgt
gggcactgctgggctcagtggagcgactatgttgagaggcagctgctctgcacagaccag
agggagctggtagtgccaccgtcctgcctgccgatgcctgactctgctgttactttgcgc
ttggcagtctggagaggccaggagctgcagaacctggagaagcagtgcctctgtgtgtct
gcccccctggaactcaggctgcgagtcagctgtgaggagaactgcaggccagtgaatgcc
agcagggacgttatgctcaaggtcaccgtgggggacaagtctgcagcagccgtgttcagc
tggtatttagatgacaccccgctggagaaggccgagcccctcccagctgcctgcagactc
caaggattctggccgcgttctttaatcctccttcagagcgacactgccaccctgctgctg
aacagctccttcctgaggacccgcagccaggccaccggaaccagagtcagagtggcgacc
aggcgcgcctacagggagggcacctacgtgatcagctccctgcctctcccggaggtgccc
acctgcaccactgccccagaggagggcattgttctgatgagctttgccatcttctgcaat
gcttccgccgcccggggcntcctggagtaccgcttctgcctggagtcaggttcctgtcta
cactgtggccctgaacctgctctcccatcagttcacctgccacttggagcagaaaacaat
gacttcatgctgacagtggtcatttctgtctgcaatcacgtgggtgacnnagagcagacc
caggcagcagttaaggcgggacgtggaggcacccatgtggaggatgaggcatttcaggcc
acagtgtgggacaatgtcactgccacactgcagggcgggcatggccctgagcagctcttc
cagctggccaggtctgtgtcatccgtgttggaccagcaggccaagggccaagggccaggc
tccgggcagccgctgagagtggacgccagcagaaaagtgcatcttctgtctgcggggtca
ctgcctgcggtcagcaccaccttgggggacatgcagaaggtgcaagagctggccgaggca
ctgaaagaggtgacccgccgcagtgaggagcccatgcccttggcccagcgggaggccagc
agggctctgcagcatgccagtgaggccccattggcagtgagtgccgaggcccatgctgag
gaccagaggcaccaggaggccaccggggacctgttccaggctgtgtgcagcgtgctggaa
gcttccctgagggacagaccagaagagcctgcaggggccaatggcagccaggtagctgta
gtgccccagctgctgggagctgtggggcacatgcaggccaccgtcctgcggggggtactg
cccgggggccttccagccacactggccgccccctccatctccgtgtacacaaacagaata
cagccccggagttagcgaggctcccctgtgcacgttgctgctgccagctctgcgaccttc
accctgcccgctgccccctcccttggctccatggaggacggtagggtacctgtggacata
aggatgaagagtttcccaaagaacccattcccagcgccaagtcacttcgatgtcagcgga
actgttggtggcctctctctgaccagccctagtggacagctcatccctgtgaagaatctg
tcggaggatatcgagatcctgctgcctcagctttcagaaggacacagcgagccaactgtg
ttgaacctgaccagacctgaagctctgtgggtgaacctgacttgagggggtgtggctttg
gggatccagctgcactggagacctgacatcccacttatgctcagcctgggctacggctac
caccccagcgtgaccagcgacgatgcccaagctcacctcctgccaacagctattccagat
gggctgtccacatggatcctgagcccagaggacctgcattttggagaaggcatctactat
ctgactgtgatccccgagtctgacctggagccggcccccggcagggacttcacagttggc
atcaccaccttcctgtctcattgtgtgttctgggatgaggtccaggggtcttgggacaac
tccaggtgccaggtggggccacggaccacccgctcccagatccactgcctctgcaaccac
ctcaccttctttggaagcacgctcctggtcatgcccaatgccgtggacgtccgccagacc
gctgagctctttgccaccttcgcggacagcctcgtggtcgtgaccaccataggctgcctc
tgtgtggcctacgtgctggtggtgatctgggtgaggaggaaggacgctcaggatcaggcc
aaggtgaaggtcacagtgctggaggacaatgacccctttgcccagtaccactacctggtg
acagtttataccagacaccggaggggggcagccgcttcctcaaaggtgactgtaacccta
tatggcctggatggagagagtgagccccaccacctgtcagaccccgacatcccgggtttt
gagggaggaggagtggatgtgttcttaccctccaccctgcttcccctgggggagctgaga
ggcctgcggctatggcatgacaactcaggggaccagccatcctggtacgtaagcagggtg
ctggtgcatgacctggcaatggaccagaagtggtacttcctctgcaactcgtggctgtcc
atcaatgtcggagactgtgtccttgacaaggtatttccagtggccacagagcaggacagg
agtaaaatcgaattcacttggcaggaagtgatgattgagctggatgattggattgggctc
ctcatgtttcccatcaacctcctgatcgttcagattttttggaacagccgtccttgggta
accaaggagcaaaacactgggaaacgggatggggggcccctcagcctggccccctcaccg
cagcctgtggaggatggtcttctgacacctgaagcagtgaccaaggatttgtggagactc
gtcagctccttgttcaaagctctgaaggtgccacccccttgctcgggctgggacttcgtg
aactcaatggacatcaaccaactgctggccttggtggaagacgtcgtctgtcagcagaac
aaagcagggcaggtattctggaaggaagccagccagacagggggccctttaacactcact
cttgaggctgtgcaagtgaaagaagaaatgcagtgccccaggcccgaggtgggcccaaga
gacactgggaaggacagtgcctacaggcagtgtctctaccttcagctggagcacttagag
caagagctgctgttgctggagccccagggcttttcccaggtccagagccacacacaggca
ctggggtagctgcagaccttgaagggctgcctggggggacagcccggaaccccgcctcca
gcacactcccttggctccctgcaggtgagcaagtccccttgaggcctcccctgctggtgt
gtcctggtgggctggctcctggtggcagccttcttcaccaggctctatggcctgcactac
aggcgggccagccccctcaggtggctcatctccagggccgtccccttcgtggagagtgtg
tttgtcacccagcccctgaaggtgctggggttcgctgctttctttgcgctggtgttgaag
acagtggaggacgaggaggagcctgtggctcccctcccgggacgtgtctctggcccagac
ccctctgccttgttccaagcacgaagaaacagtagaagggacatctaccagaagcctctg
gcctctgacgttgagaagatgaaaaccacccacctcaaggaacagaaagcacttgcctta
atcagagaaatcttggcgcacctgggctccctgtggatgccgctgctggtggcctacggg
cagggggaccccagcgcctaccacttcaacagacaccttgggcacagcttcacccgaggc
ttttcagccatgctggactttcaggacttgttcacatgggccaacaccaccctcgtgagc
aacctggacagtcatcacccaggctttatcactgatgggaactccaagccggtgggcagt
gcccagattcgccaagtgagggtccaggaaagctcttgtgcttttgccctgcagctgcag
gcttctcttgatggatgccatgtgccatattccctggacgttgaagacctgtcacactat
ggggaaggctggaatgcctctgtcctcaataacagcaatgacttttcccaggcttggcag
taccagagccagagccagagccagagccagcgccgagggtatcccatccggggctaactc
gctgtgtaccggggaggaggttacatggtccccttggggactgatcgccaaagtgcgtca
agatctccaggaactggtcttgtgaactgccagcccaagagggactgtgacagttgcagc
tgctgcctgcctaagcccctgatgctctatctgtcggaggaaggagagatcgtcgatttg
ctactgatgaagatactgnntttcctaggcattaaatgtaaaagacaggagcctggaaac
agcagtgagcagcctgagttgctgtcagaggcctgggcccctcaacctctatcagctgtg
ccccaaatttaa
DBGET
integrated database retrieval system
