Lipotes vexillifer (Yangtze River dolphin): 103076139
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Entry
103076139 CDS
T03090
Symbol
USP39
Name
(RefSeq) LOW QUALITY PROTEIN: U4/U6.U5 tri-snRNP-associated protein 2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103076139 (USP39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lve03041
]
103076139 (USP39)
Spliceosome [BR:
lve03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
103076139 (USP39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
103076139
NCBI-ProteinID:
XP_007466810
UniProt:
A0A340Y5P2
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All DBs
Position
Unknown
AA seq
569 aa
AA seq
DB search
MSGRSKRESRGSTRGKRESESRSSSARVRRERDRERETEAPSSRGSPVRVKREVEPASAR
EALAPVVPAVRVKREREADEDSEPEREVRAKNGRMDSEDRRSSHPYXLFLFCFGSLRSVL
DFDFEKLCSISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLP
DNYEIIDSSLEDITYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYA
NAVLQALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSP
HEMLQAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIF
TKKLPHPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLF
NILAKFNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPIT
NVDLREYLSEEVQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYELQDLQVTD
ILPQMITLSEAYIQIWKRRDNDETNQQGA
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgtccggccggtccaagcgggagtctcgtggatccacccgcgggaagcgcgagtctgag
tcgcggagcagctcggctcgtgtcagacgggagcgagatcgggagcgggagaccgaggct
ccgagctcccggggcagtccggtgcgcgtgaagcgggaggtcgagccggcgagcgcgcgc
gaggccctggcgcccgtggtcccggcggtgcgggtgaagcgggagcgcgaggccgacgag
gactcggagcctgagcgggaggtgcgagcaaagaatggccgcatggattctgaggatcgt
aggagcagccatccctattaattgtttctgttttgttttggttctcttaggagtgtgctg
gactttgactttgagaaactgtgttccatctccctctcgcatatcaatgcatatgcctgt
ctggtgtgtggcaagtactttcagggccggggtttgaagtctcatgcctacattcacagt
gtccagtttagtcaccatgtcttccttaacctccacaccctcaagttttactgcctccca
gacaactatgagatcatcgattcctccctggaggatatcacgtatgtgttgaagcccact
ttcacaaagcagcagatcgctaacttggacaagcaagccaagttgtcccgggcatatgat
ggcaccacttacctgcccggtatcgtcggcctgaataacataaaggccaacgactacgcc
aatgccgtccttcaggctctgtctaacgttcctcctctccgaaactacttcctggaagaa
gacaattataagaacatcaagcgtcctcctggggatatcatgttcttgttggtccagcgt
tttggagagctgatgagaaagctctggaaccctcgaaatttcaaggcacatgtgtctccc
catgagatgcttcaagctgtcgtcctttgcagcaagaagacttttcagatcaccaagcaa
ggggatggagtcgactttctctcctggtttttgaatgctctacactcagctctggggggc
acaaagaagaaaaagaagactattgtgactgatgttttccaggggtccatgaggatcttc
actaaaaagcttcctcatcctgatttgccagcagaagaaaaagagcagctgctccataat
gatgagtaccaagagacgatggtggagtccacgtttatgtacctgacgctggaccttcct
actgcccccctctacaaggacgagaaggagcagctcattatcccccaggtgccgctcttc
aacatcttggccaagttcaacggcatcactgagaaggaatataagacttacaaggagaac
tttctgaagcgcttccagctcaccaagctgcctccatatttaatcttttgtattaagaga
tttactaagaacaatttctttgtggagaagaatccgactattgtcaacttccctattaca
aatgtggatctgagagagtacttgtccgaggaagtacaggcagtgcacaagaataccacc
tacgacctcatcgccaacattgtgcacgacggcaagccctctgagggctcctaccggatt
catgtgcttcatcatgggacaggcaaatggtatgaattacaagacctccaggtgactgac
atccttccccagatgatcacgctgtcggaggcttacattcagatttggaagaggcgagat
aacgatgaaaccaaccagcagggggcttga
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