Lipotes vexillifer (Yangtze River dolphin): 103076407
Help
Entry
103076407 CDS
T03090
Symbol
SHMT1
Name
(RefSeq) serine hydroxymethyltransferase, cytosolic isoform X1
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve00260
Glycine, serine and threonine metabolism
lve00630
Glyoxylate and dicarboxylate metabolism
lve00670
One carbon pool by folate
lve01100
Metabolic pathways
lve01200
Carbon metabolism
lve01230
Biosynthesis of amino acids
lve01240
Biosynthesis of cofactors
lve01523
Antifolate resistance
lve04981
Folate transport and metabolism
Module
lve_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
103076407 (SHMT1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
103076407 (SHMT1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
103076407 (SHMT1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
103076407 (SHMT1)
09160 Human Diseases
09176 Drug resistance: antineoplastic
01523 Antifolate resistance
103076407 (SHMT1)
Enzymes [BR:
lve01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
103076407 (SHMT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-GeneID:
103076407
NCBI-ProteinID:
XP_007448455
UniProt:
A0A340WN53
LinkDB
All DBs
Position
Unknown
AA seq
484 aa
AA seq
DB search
MATPVNGAPVDANLWSSHEKMLAQPLKDSDVEVYSIIKKESNRQRAGLELIASENFASRA
VLEALGSCLTNKYSEGYPGQRYYGGTEFIDELEVLCQKRALQVYGLDPQGWGVNVQPYSG
SPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFLTNKKKISATSIFFESLPYKVNPDTGC
INYDQLEENARLFHPKLIIAGTSCYSRNLDYARLREIADDNGAYLMADMAHISGLVAAGV
VPSPFEHCHVVTTTTHKTLRGCRAGMIFYRKGVRSVDPKTGRETRYNLESLINSAVFPGL
QGGPHNHAIAGVAVALKQAMTPEFRVYQRQVLANCRALAEALMGLGYKVVTGGSDNHLIL
VDLRSKGTDGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEEDFQK
VARFIHRGIELTLQIQDTVGVKATLKEFTEKLAEAEDHQRAVAALRAEVESFAALFPLPG
LPDF
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggcgactcccgtcaacggagcccccgtggatgccaacttgtggtcctcgcatgagaag
atgctggcgcagcccctgaaagacagcgacgtggaggtttacagcatcattaagaaggag
agtaaccggcagagggccggactggagctgattgcctcagagaactttgccagccgggct
gttctggaggccctgggttcttgcttaaccaacaagtactcggaggggtacccgggccaa
aggtactacggcggaacggaattcatcgatgagctggaggtcctctgtcagaagcgagcg
ctgcaggtctatggcctggacccccagggctggggagtcaatgtccaaccctactcaggc
tcccccgcaaacttcgcggtatacacagccctggtggagccgcatggccgcatcatgggc
ctggacctgcccgacgggggccacctgacccacgggttcctgaccaacaagaagaagatc
tccgctacgtccatctttttcgaatctctgccctacaaggtgaaccccgacaccggctgc
atcaactacgaccagctggaggagaatgcccgcctcttccacccgaagctcatcatcgcg
gggaccagctgctactcccggaacctggactacgcccggctgcgtgagatcgctgacgac
aacggggcgtatctcatggccgacatggcacacatcagcgggctagtggcagccggtgtg
gtgccctcccccttcgagcactgccacgtggtgaccaccaccacccacaagaccctgcgg
ggctgccgcgccggcatgatcttctataggaagggagtgcgcagcgtggacccgaagacg
ggcagagagactcgctacaacctggagtcactcatcaactctgccgtgttcccaggcctg
cagggggggccgcacaaccacgccattgctggggtggcggtggctctgaagcaggccatg
actccggagttcagagtctaccagcgccaggtgctggccaactgcagggctctggccgag
gccttgatggggctgggctacaaagtggtcacaggtggttctgacaaccacttgatcctc
gtggacctccgctccaaaggcacagacggcggccgggctgagaaggtgctggaagcctgt
tccatcgcctgcaacaagaacacctgcccaggtgacaaaagcgccctgcggcccagcgga
ctgcgcctggggaccccggcgctgacgtcccgaggactcttggaagaggatttccaaaaa
gttgcccgttttattcacagagggatagagctgaccctgcagatccaggacaccgtgggg
gtgaaggccaccctgaaggagttcacggagaagctggcggaggccgaggatcaccagcgg
gctgtggcggcactcagggcggaggtggagagcttcgccgccctcttccctctgcccggc
ctgcccgacttctag
DBGET
integrated database retrieval system
