Lipotes vexillifer (Yangtze River dolphin): 103076652
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Entry
103076652 CDS
T03090
Symbol
TTC28
Name
(RefSeq) LOW QUALITY PROTEIN: tetratricopeptide repeat domain 28
KO
K24936
tetratricopeptide repeat protein 28
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lve03037
]
103076652 (TTC28)
Cilium and associated proteins [BR:
lve03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
103076652 (TTC28)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_7
CHAT
TPR_1
TPR_8
TPR_2
TPR_10
TPR_MalT
Rapsyn_N
RPN7
TPR_14
TPR_NPHP3
TPR_17
TPR_16
TPR_9
ANAPC5
TPR_6
PUB
TPR_19
Motif
Other DBs
NCBI-GeneID:
103076652
NCBI-ProteinID:
XP_007472281
UniProt:
A0A340YF40
LinkDB
All DBs
Position
Unknown
AA seq
2113 aa
AA seq
DB search
MGAVYIAMGDFENAVQCHEQHLKIAKDLGNKREEARAYSNLGSAYHYRRNFDKAMSYHNY
VLELAQELMEKAIEMRAYAGLGHAARCMQDLERAKQYHEQQLGIAEDLKDRAAEGRASSN
LGIIHQMKGDYDTALKLHKTHLCIAQELSDYAAQGRAYGNMGNAYNALGMYDQAVKYHRQ
ELQISMEVNDRASQASTHGNLAVAYQALGAHDRALQHYQNHLNIARELRDIQSEARALSN
LGNFHCSRGEYIQAAPYYEQYLRLAPELQDMEGEGKVCHNLGYAHYCLGNYQEAVKYYEQ
DLALAKDLHDKLSQAKAYCNLGLAFKALLNFNKAEECQKYLLSLAQSLNNSQAKFRALGN
LGDIFICKKDISGAIKFYEQQLGLAHHVKDRRLEASAYAALGTAYRMIQKQDKALGYHTQ
ELEVYQELSDLPGECRAHGHLAAVYMALGKYTMAFKCYEEQLDLGQKLKDPSLEAQVYGN
MGITKMNMNVMEEAIGYFEQQLAMLQQLSGNESVLDRGRAYGNLGDCYEALGDYEEAIKY
YEQYLSVAQSLNRMQDQAKAYRGLGNGHRAMGSLQQALVCFEKRLVVAHELGEAFNKAQA
YGELGSLHSQLGNYEQAISCLERQLNIAREMKDRALESDAACGLGGVYQQMGEYDTALQY
HQLDLQIAEETNNPTCQGRAYGNLGLTYESLGTFERAVVYQEQHLSIAAQMNDLVAKTVS
YSSLGRTHHALQNYSQAVMYLQEGLRLAEQLGRREDEAKIRHGLGLSLWASGNLEEAQHQ
LYRASALFETIRHEVQLSTDYKLSLFDLQTSSYQALQRVLVSLGHHDEALAVAERGRTRA
FADLLVERQTGQQDSDPYSPVTIDQILEMVNGQRGLVLYYSLAAGYLYSWLLAPGAGILK
FHEHYLGDNTVENSSDFQAGSSTALPTATSSALEQHIASVREALGVESYYSRACASSETE
SEAGDIMDQQFEEMNNRLNSVTDPTGFLRMVRRNNLFNRSCQSMTSLVGNAASPIKDGTS
SLPRRQSSFARPPLRALYDLLVAPMEGGLMHSSGPVGRHRQLVLVLEGELYLIPFALLKG
SSSNEYLYERFALIAVPSIRSLGPQAKSHLRKNPPAYSSSTSMAAVVGNPKLPSAVMDRW
LWGPMPSAEEEAYMVSELLGCQPLVGSVATKERVMSALTQAECVHFATHISWKLSALVLT
PSVEGTPAGSKSSFGHPYTIPESLRVQDDTSDGESISDCPPLQELLLTAADVLDLRLPVK
LVVLGSSQESNSKVTADGVIALTRAFLAAGAQCVLVSLWPVPVAASKMFLHALYSSLLNG
LKASAALGEAMKVVQSSKAFSHPSNWAGFLLIGSDVKLNSPSSLIGQALTEILQHPERAR
DALRVLLHLVEKSLQRIQNGQRNAMYTSQQSVENKVGGIPGWQALLTAVGFRLDPPASGL
PAAVFFPTSDPGDRLQQCSSTIQSLLGLPNPALQALCKLITASETGEQLISRLHQVLVQL
QAGEKEQDFASAPIQVSISVQLWRLPGCHEFLAALGFDLCEVGQEEVILKTGKQANRRTM
HFALQALLALFDSTELPKRLSLDSSSSLESLASAQSVSNALPLGYQHPPFSPTGAESIAS
DAISVYSLSSIASSMSFVSKPEGGSEGGGPRGRQDYDRSKNTFPQRSTLPRSQLSPPTRP
ADSKDEEEYEGFSIISTEPLAAYQENRKTRFSPDHKQSRVGTAGGVKVSVSSKGSISTPN
SPVKMTLIPSPNSPFQKVGKLASSDTGESDQSSTETDSTVKSQEESNPKLDPQELAQKIL
EETQSHLIAVERLQRGSGQGKGTNPEDGISVPNSAAVFRASETXXXXRPALSHQKSQPSP
VTIKPKPPARSSSLPKVSSGYSSPTASEASIKDSPSQHSGRPSPGSDSQTSLTDQPLFKL
KYPSSPYSAHISKSPRNMSPSSGHQSPAGSAPSPALSYSSAGSARSSPADAPDIDKLKMA
AIDEKVQAVHNLKMFWQSTPQHSTGPMKIFRGTPGTMTSKRDVLSLLNLSPRHSKKEEGA
DKLELKELSLQQCGETPPKAPPNGHWHTETTSLSTLPLPAGPPAAVPTRPLRLPSGNGYK
FLSPGRFFPSSKC
NT seq
6342 nt
NT seq
+upstream
nt +downstream
nt
atgggagctgtgtatattgccatgggtgattttgagaatgctgtgcagtgccatgagcag
catctgaagatagctaaggacctgggcaacaagcgagaagaggcccgtgcctatagcaat
ctgggtagtgcctaccactacaggaggaactttgacaaggctatgtcttaccacaactac
gtgctggagctggctcaggagttgatggagaaggccattgagatgcgggcctatgctggc
ctgggccatgctgccaggtgcatgcaggatttggagagagctaaacagtaccatgagcag
cagttgggcatcgctgaggatctcaaggaccgggctgcagaggggcgagcgtcctccaat
ctgggaatcatacaccagatgaaaggtgattatgatactgcactgaaactccacaagacc
cacctgtgcatcgcccaggaactgagtgattacgccgcccagggccgtgcctacgggaat
atgggcaatgcctacaatgctctgggcatgtacgaccaggctgtcaagtaccaccggcag
gagctgcagatctccatggaagtgaatgaccgtgcctcgcaggcatccacacacgggaac
cttgccgtggcctatcaggccctgggtgcccacgaccgggccctgcagcactatcagaac
cacctgaacatcgctcgggagctgcgtgacatccagagcgaggcccgggccctcagcaac
ctgggcaacttccattgctctcgaggggagtacatccaggccgccccctattacgaacag
tacctccggcttgctcccgagcttcaagacatggaaggagaagggaaggtctgccacaat
cttggctatgcccattactgccttggaaattaccaggaggcggtgaagtactatgagcag
gatctggccctggccaaagacctccatgacaagttgagccaagcaaaagcctactgcaac
ttgggcttagcattcaaggctctgctgaattttaacaaagccgaagagtgtcagaagtac
ctactgtccctagcccagtccctgaataactcccaggctaaatttcgagccctggggaac
ctgggcgatatattcatctgtaaaaaagatatcagtggtgcaataaaattctatgagcag
cagctgggcttggctcaccatgtaaaggacagaagactggaggccagtgcatatgcagcc
ctgggcactgcataccgaatgatccagaaacaagacaaggccttgggttatcacacgcag
gaactggaggtatatcaggagctgagcgacttgccgggagagtgcagagctcatgggcac
ctggcagccgtctacatggcccttgggaaatacacgatggcattcaagtgttatgaagag
cagctggatctagggcagaagctgaaagatccgagtctagaagctcaggtctatggcaac
atgggcatcacaaagatgaacatgaatgtgatggaagaagccatcggctacttcgagcag
cagctggccatgctgcagcagctgagtggaaatgagtctgtgctcgacaggggccgggcc
tatggcaacctgggggattgctacgaggccctgggtgactatgaggaagctataaagtac
tatgaacaatatttatctgttgcccagagtctaaatcgcatgcaagaccaagccaaggct
taccggggcctgggaaatggacacagggcaatggggagcttgcagcaagcccttgtgtgc
tttgaaaagaggctcgtggttgcccatgagctcggggaggcctttaataaagcccaggcc
tatggagagctgggaagtctgcacagccaattagggaattacgaacaagccatttcctgc
cttgaacgccagctgaacattgctagagagatgaaagaccgagctctggaaagtgatgct
gcctgtggcctggggggtgtttaccagcagatgggggaatacgatacagccctgcagtac
caccagctggatctgcagatagcagaggaaaccaacaaccccacatgtcagggacgggcc
tatgggaacctgggcctgacctacgagtccctgggcacctttgagagggccgtggtctat
caagaacagcacttgagcatcgctgcacagatgaacgacttggtggccaagacagtgtct
tatagtagccttggaaggacccatcatgctttgcagaactattcccaggcagtcatgtac
ttgcaggaaggtttaaggttagcagagcagctgggccgaagagaagatgaagccaaaatt
cgccatggtcttggcctctccctttgggcgagtgggaacctggaggaagcccaacatcag
ctctatagagcatcagccttgtttgaaacgatccgacacgaggtgcagctgagcacggac
tacaagctctccctctttgacctgcagacatcctcctaccaggccttgcagcgagtgctc
gtcagcctcggccatcatgatgaagccctggccgtggcagaaagaggacggacaagggcg
tttgcagatctcctggtagaacggcagacaggacagcaggactccgacccctactcccca
gtcactattgatcagatcttagagatggttaatggccagaggggactagtgctttactat
tccctggctgcgggctacctgtacagctggctgcttgctcctggggcagggattctgaag
tttcacgaacactacctgggagacaacacggtggaaaactccagtgacttccaggctggc
agcagcacagcccttccaacagccaccagctcagccctagagcagcacatcgccagcgtc
cgggaggccctgggtgtggaatcttactactcaagggcctgtgccagcagtgagacagag
agtgaagccggagacatcatggaccagcagtttgaggagatgaacaacaggctcaactcg
gtcaccgaccccactggctttcttcggatggttcgccgcaacaacctctttaacaggagc
tgccagagcatgaccagcctggtcggcaacgccgcgtcgcccatcaaggacgggacctcc
tctcttcccaggaggcagagctcgttcgccaggccgccgctccgcgctctgtacgacctg
ctcgtggcacccatggaagggggcctgatgcactccagcggccctgtgggccggcaccgg
cagctggtcctggttctggagggggagctctacctcatcccgttcgccctcctgaaggga
agctcctccaacgagtacctgtacgagcgcttcgccctcattgccgtcccttccatccgc
tccctcggtcctcaggccaagtctcacctgcggaagaaccctcccgcctactccagctcc
acgtccatggcggctgtggtcggcaaccccaagctcccatcggcggtgatggacaggtgg
ctgtggggcccgatgccgtcagccgaggaggaggcctacatggtgtccgagctgctgggc
tgccagccgctggtgggcagcgtggccaccaaagagcgggtcatgagcgccctgacccag
gccgagtgcgtccactttgccacccacatctcttggaaactgtcggccttagtcctcacg
cccagtgtggaaggcacccccgctggcagcaagagctccttcggccacccctacaccatc
cctgagtccctgcgggtgcaggatgacaccagcgatggcgagagcatctcggactgcccg
ccactgcaggagctgctgctcacggccgccgacgtcctggacctgcggctgcctgtgaag
ctggtggttctcggctcctcccaggagtccaacagcaaggtcacagccgatggggtcatc
gcgctgacgcgggccttcctggcggctggcgcacagtgtgtcctcgtgtctctgtggcct
gtgcccgtggctgcttccaagatgttcctgcacgccttgtactcgtccctgctgaatggc
ctgaaggccagcgcagccctgggtgaggccatgaaggtggtgcagagcagcaaggccttc
tcacacccctccaactgggcagggttcttgctcatcgggagcgatgtgaagctcaacagt
ccctcctcgctcatcggccaggccctcaccgagatcctccagcacccagagcgggcgcgg
gatgccctgcgagtgctgctgcacctggtggagaagtccctgcagcgcattcagaacggg
cagcgcaacgccatgtacacatcccagcagagcgtggagaataaagtgggtggcatcccc
ggctggcaggccctcctcactgctgtgggcttccggctggaccccccggccagcggcctg
ccagcagccgtcttcttcccaacctccgacccgggcgaccggctccagcagtgcagcagc
accatccagtccctgctgggtctgcccaaccctgccctccaagccctctgcaagctcatc
actgcctcggagacgggcgagcagctcatcagccggctccaccaggtgctggtccagctg
caggccggcgagaaggagcaggacttcgcatcagcccccattcaggtctccatcagcgtc
cagctgtggcggctcccgggatgtcacgaattcctggcggctctaggttttgatctctgt
gaggttggtcaggaggaagtaattctgaaaaccgggaaacaagccaatcgacggaccatg
cactttgcgctccaagcactgctcgcactcttcgattccactgagctgcccaagcgcctc
agccttgacagctcgtcctccctggagtctctggcctcagcccagtctgtctccaatgct
ctgcccttgggctaccagcaccctcctttctctcccaccggtgcagagagcatagcctca
gatgccatctctgtgtacagtctgagctccatcgcctcctcaatgagctttgtctccaag
cctgagggtgggtcagagggcggaggtcctcgaggaaggcaggactacgaccggtccaag
aacaccttcccacagcgatccaccctgcctcggagccagctgtcccccccgacccgccct
gcagacagcaaagacgaagaagaatacgaagggttttccatcatcagcactgagcccttg
gcggcctaccaagaaaacagaaagactcgcttctcaccagatcacaaacagtcccgcgtc
gggacagctggaggtgtgaaagtttcagtaagctccaaggggagcataagcactccaaac
tctccagttaaaatgactctgattcccagcccaaactcacccttccagaaggttggaaaa
ctagcaagttcagatacgggagaatcagaccagtctagcacagaaacagatagtaccgtg
aaatcccaagaagaaagcaacccaaagcttgatccacaagagttggcccagaagattcta
gaggagacacaaagccatctcattgcggtggaacgtcttcagaggggcagtggtcaaggt
aagggcactaatcctgaagatggcatttccgtgcccaacagcgctgctgtcttcagagcg
tcagaaacagnnnnnnnnnncaggcctgccctctcccaccagaagagccagccgtcgcca
gttactatcaaaccaaagcccccagccagaagctcttccctacccaaggtgagttcagga
tacagcagccccaccgcctcagaggcgtccatcaaagacagcccgagccagcacagtggc
cggccatcgcccggctctgactcccagacctccctgaccgaccagcctctctttaagctg
aagtatcccagctctccttacagtgctcacatttccaagtcaccaaggaacatgtccccg
agctcaggccaccagtctcctgctggaagtgcaccgtccccagctctctcctattcctca
gctggctccgctcgctcgagtccagccgacgctcctgacatagacaagctgaagatggca
gccatcgacgagaaggtgcaggctgtacacaacctgaagatgttttggcagagcacaccc
cagcactccacgggaccaatgaaaatattccgggggacccctggcacgatgacttccaag
agagatgtcctcagtctattaaacttgtcacctcggcacagcaagaaggaggaaggagca
gacaagctggaacttaaggagctgtctttgcagcagtgtggagaaacgcccccaaaagcc
cctcccaacggacactggcatacggagaccacctcgctgagcacgctgccgctgcccgcc
ggccctcctgccgcagtgcccacgcgccctttgagacttccttctggaaacggctacaag
tttctgtccccaggaagattttttccttcctctaaatgctaa
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