Lipotes vexillifer (Yangtze River dolphin): 103076684
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Entry
103076684 CDS
T03090
Name
(RefSeq) transcription factor SOX-2-like
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve04390
Hippo signaling pathway
lve04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09130 Environmental Information Processing
09132 Signal transduction
04390 Hippo signaling pathway
103076684
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
103076684
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lve03000
]
103076684
Transcription factors [BR:
lve03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
103076684
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
103076684
NCBI-ProteinID:
XP_007468982
UniProt:
A0A340Y962
LinkDB
All DBs
Position
Unknown
AA seq
324 aa
AA seq
DB search
MYNMMETELKPPGPQQTSGGGGGGGGGGGGNSTAAAAGGNQKNSPDRVKRPMNAFMVWSR
GQRRKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLRALHMKEHPDYKYRPR
RKTKTLMKKDKYTLPGGLLAPGGNSMASGVGVGAGLGAGVNQRMDSYAHMNGWSNGSYSM
MQDQLGYPQHPGLNAHGAAQMQPMHRYDVSALQYNSMTSSQTYMNGSPTYSMSYSQQGTP
GMALGSMGSVVKSEASSSPPVVTSSSHSRAPCQAGDLRDMISMYLPGAEVPEPAAPSRLH
MSQHYQSGPVPGTAINGTLPLSHM
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacatgatggagacggagctgaagccgccgggcccgcagcaaacttcggggggc
ggcggcggcggcggtggcggcggcggcggcaactccaccgcggcggcggcgggcggcaac
cagaagaacagcccggaccgcgtcaagcggcccatgaacgccttcatggtgtggtcccgc
gggcagcggcgcaagatggcccaagagaaccccaagatgcacaactcggagatcagcaag
cgcctgggcgccgagtggaaacttttgtcggagacggagaagcggccgttcatcgacgag
gccaagcggctgcgagcgctgcacatgaaggaacacccggattataaataccggccccgg
cggaaaaccaagacgctcatgaagaaggataagtacacgctgccgggagggctgctcgcc
ccgggcggcaacagcatggcgagcggggtcggggtgggcgccggcctcggcgcgggcgtg
aaccagcgcatggacagctacgcgcacatgaacggctggagcaacggcagctacagcatg
atgcaggaccagctgggctacccgcagcacccgggcctcaacgcgcacggcgccgctcag
atgcagcccatgcaccgctacgacgtgagcgccctgcagtacaactccatgaccagctcg
cagacctacatgaacggctcgccgacctacagcatgtcctattcgcagcagggcacccct
ggcatggctcttggctccatgggctcggtggtcaagtccgaggccagctccagccccccc
gtggttacctcttcttcccactccagggcgccctgccaggccggggacctccgggacatg
atcagcatgtacctccccggcgccgaggtgccggagcccgccgcccccagcagacttcac
atgtcgcagcactaccagagcggcccggtgcccggcacggccattaacggcacactgccc
ctctcgcacatgtga
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