Lipotes vexillifer (Yangtze River dolphin): 103077190
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Entry
103077190 CDS
T03090
Symbol
SMARCD2
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve03082
ATP-dependent chromatin remodeling
lve04714
Thermogenesis
lve05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103077190 (SMARCD2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
103077190 (SMARCD2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
103077190 (SMARCD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lve03021
]
103077190 (SMARCD2)
03036 Chromosome and associated proteins [BR:
lve03036
]
103077190 (SMARCD2)
Transcription machinery [BR:
lve03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103077190 (SMARCD2)
Chromosome and associated proteins [BR:
lve03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
103077190 (SMARCD2)
PBAF complex
103077190 (SMARCD2)
GBAF(ncBAF) complex
103077190 (SMARCD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
103077190
NCBI-ProteinID:
XP_007456829
UniProt:
A0A340XC96
LinkDB
All DBs
Position
Unknown
AA seq
531 aa
AA seq
DB search
MSGRGAGGFPLPPLSPGGGAVAAALGAPPPPAGPGMLPGPALRGPGPAGGVGGPGAAAFR
PMGPAGPAAQFQRPGMSPGSRMPMAGLQVGPPAGSPFGSAAPLRPGMPPTMMDPFRKRLL
VPQAQPPMPAQRRGLKRRKMADKVLPQRIRELVPESQAYMDLLAFERKLDQTIARKRMEI
QEAIKKPLTQKRKLRIYISNTFSPSKAEGDSAGTAGTPGGNPAGDKVASWELRVEGKLLD
DPSKQKRKFSSFFKSLVIELDKELYGPDNHLVEWHRMPTTQETDGFQVKRPGDLNVKCTL
LLMLDHQPPQYKLDPRLARLLGVHTQTRAAIMQALWLYIKHNQLQDGHEREYINCNRYFR
QIFSCGRLRFSEIPMKLAGLLQHPDPIVINHVISVDPNDQKKTACYDIDVEVDDPLKAQM
SNFLASTTNQQEIASLDVKIHETIESINQLKTQRDFMLSFSTDPQDFIQEWLRSQRRDLK
IITDVIGNPEEERRAAFYHQPWAQEAVGRHIFAKVQQRRQELEQVLGIRLT
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggccgtggcgcgggcgggttcccgctgcccccgctgagccctggcggcggcgcc
gttgccgcggccctgggagctccgcctccgccagcaggacccggcatgctgcccggaccg
gcgctcagggggcccgggccggctggaggcgtggggggccctggggccgccgccttccgc
cccatgggccccgcgggccccgcggcgcagttccagaggcctggcatgtcaccagggagc
cggatgcccatggctggcttgcaggtgggaccccctgccggctccccatttggctcagct
gctccacttcgacctggcatgccacccaccatgatggacccattccgaaaacgcctgctt
gtgccccaggcccagcccccgatgcctgcccagcgccgggggttaaagaggaggaagatg
gcagataaagttctacctcagcgaattcgggagcttgtcccagagtctcaggcgtacatg
gatctcttggcttttgagcggaagctggaccagaccattgctcgaaagcggatggagatc
caggaggccatcaaaaagcctctgacgcaaaaacgaaagctgcggatctatatttctaat
acgttcagtcccagcaaggcagaaggtgatagtgcaggaaccgcagggacccctggggga
aaccccgcaggggacaaggtggcttcctgggaactccgagtagagggaaaactgctggat
gatcctagtaaacagaagaggaagttttcttcattctttaagagcctcgtcattgagctg
gacaaggaactgtacgggcctgacaaccacctggtggagtggcaccggatgcccaccacc
caggagacagatggcttccaggtgaaacggcccggagacctcaacgtcaagtgcaccctc
ctgctcatgctggatcatcagcctccccagtacaagttggacccccgactggcgaggctg
ctgggggtgcacacacagacgagggctgccatcatgcaggccctgtggctctacatcaaa
cacaaccagctgcaggacggccacgagcgggaatacatcaactgcaaccggtatttccgc
cagatcttcagttgtggccgactccgtttctctgagattcccatgaagctagccgggttg
ctgcagcatccagaccccattgtcatcaaccatgtcattagcgtggaccctaacgaccag
aagaagacagcctgttacgacattgatgtggaggtggatgacccgcttaaggcccagatg
agcaattttctggcctccaccaccaatcagcaggagatcgcctctcttgatgtcaagatc
catgagaccattgagtccatcaaccagctgaagacccagagagatttcatgctcagtttt
agcactgacccccaggacttcatccaggaatggctccgttcccagcgccgggacctcaag
atcatcactgatgtgattgggaatcctgaggaggagagacgagctgctttctaccaccag
ccctgggcccaggaagcagtggggaggcacatctttgccaaggtgcagcagcgaaggcag
gaactggaacaggtgctgggaatccgcctgacctaa
DBGET
integrated database retrieval system
