Lipotes vexillifer (Yangtze River dolphin): 103077285
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Entry
103077285 CDS
T03090
Symbol
DDX46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103077285 (DDX46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lve03041
]
103077285 (DDX46)
Enzymes [BR:
lve01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103077285 (DDX46)
Spliceosome [BR:
lve03041
]
Complex A
U2 snRNP components
U2 related factors
103077285 (DDX46)
Complex B
103077285 (DDX46)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
KH-I_KHDC4-BBP
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
103077285
NCBI-ProteinID:
XP_007461430
UniProt:
A0A340XQX1
LinkDB
All DBs
Position
Unknown
AA seq
1031 aa
AA seq
DB search
MGRESRHYRKRSASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRS
RSRDRKRLRRSRSRERDRSRERRRSRSRDRRRSRSRSRGRRSRSSSPGNKSKKAENRSRS
KEKTDSGESSKEKKKDKDDKEDEKEKDAGNFDQNKLEEEMRKRKERVEKWREEQRKKAME
NIGELKKEIEEMKQGKKWSLEDDDDDEDDPAEAEKEGNEMEGEELDPLDAYMEEVKEEVK
KFNMRSVKGGGGNEKKSGPTVTKVVTVVTTKKAVVDSDKKKGELMENDQDAMEYSSEEEE
VDLQTALTGYQTKQRKLLEPVDHGKIEYEQFRKNFYVEVPELAKMSQEEVNVFRLEMEGI
IVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGS
GKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVY
GGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFE
PQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVI
EEEKKFLKLLELLGHYQETGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDS
IINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAY
TFITEDQARYAGDIIKALELSGTAVPPDLEKLWSDFKDQQKAEGKIIKKSSGFSGKGFKF
DETEQALANERKKLQKAALGLQDSDDEDAAVDIDEQIESMFNSKKRVKDMAAPGTSSVPA
PTAGNAEKLEIAKRLALRINAQKNLGIESQDVMQQATNAILRGGTILAPTVSAKTIAEQL
AEKINAKLNYVPLEKQEEERQDGGQNESFKRYEEELEINDFPQTARWKVTSKEALQRISE
YSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEITRLIKEELIRLQNSY
QPTNKGRYKVL
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgggccgggagtcacgccactatcggaagcgatcagcatcacggggacgctctggaagt
cgatctagaagtcgctcaccgtcagacaaaagaagtaaacgtggagatgacagaaggtct
agaagcagggatagagatagaaggagagagaggtctcgtagcagggataaaagaagatct
cggtcaagagacaggaagcgtctgaggcgttccagaagtagagagagagatcgaagtcga
gagcgaagaagatctcgaagtcgagacaggagacgttcgaggagtagaagccggggccgg
agatcccgatcctccagtcctggcaataaaagcaagaaagctgaaaataggtctaggtcc
aaagagaaaacagatagtggggaaagttctaaagagaagaaaaaagacaaagacgacaaa
gaggatgaaaaagaaaaggatgccggtaactttgaccagaataagctagaagaagaaatg
agaaagcgaaaagaaagggtagagaaatggcgggaagaacaacgtaaaaaggccatggaa
aacataggggaactgaaaaaggaaattgaagagatgaaacaagggaaaaagtggagttta
gaagatgatgatgatgatgaagatgatcctgcagaggctgaaaaggaaggaaatgaaatg
gagggtgaggagttagatccattagatgcttacatggaagaagtgaaagaggaagtaaaa
aagtttaatatgagaagtgtgaaaggtggtgggggaaatgaaaagaagtctgggccaaca
gtcacaaaagttgtcactgttgtcacaaccaaaaaagcagtcgtagattctgataagaag
aaaggtgagctaatggagaatgaccaggatgccatggagtattcttcagaggaggaagaa
gttgatcttcagactgcccttacaggttatcagacaaagcagagaaagcttctagaacca
gtggatcatggaaaaattgaatatgaacaattcagaaaaaacttttacgttgaagttcca
gaactggcaaaaatgtctcaagaggaagtgaatgtatttcggttggaaatggagggcatt
attgtcaagggaaaaggttgccccaaaccaattaaatcttgggttcagtgtgggatttct
atgaagatcttaaattctctcaaaaagcatggttatgaaaagcctacgccaatccaaacc
caggcgattcctgctataatgtctggacgagatttgattggtattgccaagacaggaagt
ggaaagaccattgcctttctgttgcctatgtttagacacatcatggatcagaggtcatta
gaagaaggagagggaccaatagctgtcatcatgactccaactcgagaactggctttacag
attactaaggaatgtaagaagttttcgaagaccttgggccttagagtggtctgtgtttat
ggaggaacaggaatcagtgagcagattgctgagctgaaaagaggtgctgaaattattgtt
tgcacacctggtcgaatgattgacatgttagcagctaacagtggtcgggttacaaatctt
cgaagagtgacttatgttgttttagatgaagcagacagaatgtttgacatgggttttgaa
ccacaggtcatgcgcattgtggataatgttcgtcctgaccgacagacagttatgttttca
gctactttccccagagctatggaggccttggctcgcagaatcctgagtaaacccattgaa
gtgcaggttggaggcagaagtgtggtttgctcagatgtggagcaacaagtgattgtgatt
gaagaagaaaagaaattcttgaagctacttgaacttctaggccattatcaagaaacagga
tctgtcattatatttgtggataagcaggaacatgctgatggtcttctgaaagatttaatg
agagcttcttacccttgcatgtctcttcatggaggcattgatcaatatgacagagatagc
atcataaatgattttaagaatgggacctgcaaacttcttgttgctacgtctgttgctgcc
cgaggcctagatgtgaaacatctgattcttgtagtaaattatagctgccccaaccattat
gaggattatgtgcacagagcaggacggactggaagagcaggcaacaaaggctacgcctat
actttcatcacagaagatcaggctcggtatgctggtgacataattaaagcccttgaattg
tcagggactgcagtgccacctgatctagagaaactttggagtgatttcaaagatcaacag
aaagctgaagggaaaataattaaaaagagtagtgggttctctggtaagggattcaagttt
gatgaaacagaacaagctttggcaaatgagagaaagaagttacaaaaagctgctcttggt
cttcaagattcagatgatgaggatgctgcagttgatattgatgagcaaattgaaagcatg
tttaattcaaagaagagagtgaaggatatggctgctcctggaacatctagtgttcctgct
ccaactgcaggaaatgctgagaagttagaaattgcaaagagattggctcttagaatcaat
gctcagaagaatttggggattgagtctcaggatgtgatgcagcaggccaccaatgcaatt
cttagaggtggcaccatcctggctcccactgtctctgcaaaaaccattgcagagcaactt
gctgaaaagatcaatgccaagcttaattatgtgcctttggagaaacaagaagaggagaga
caggatggtggacagaatgaatcttttaagagatatgaagaagaattagagatcaatgac
ttcccacagactgctaggtggaaagttacctctaaggaagctctgcagagaatcagtgaa
tattctgaagctgcaattacaatcagaggaacatacttcccacctggcaaagaacccaag
gaaggagagcggaaaatttacttggcaattgaaagtgccaatgaactggctgtgcagaaa
gcaaaggcagaaatcaccaggcttataaaagaagaactgatccggctgcaaaattcatac
caaccaacaaataaaggaagatacaaagtcttataa
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