Lipotes vexillifer (Yangtze River dolphin): 103077326
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Entry
103077326 CDS
T03090
Symbol
CHD8
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 8
KO
K04494
chromodomain helicase DNA binding protein 8 [EC:5.6.2.-]
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
103077326 (CHD8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lve03036
]
103077326 (CHD8)
Chromosome and associated proteins [BR:
lve03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
103077326 (CHD8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
BRK
ResIII
DEAD
HDA2-3
HTH_Hrp3
MUN
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
103077326
NCBI-ProteinID:
XP_007449572
UniProt:
A0A340WPJ9
LinkDB
All DBs
Position
Unknown
AA seq
2583 aa
AA seq
DB search
MADPIMDLFDDPNLFGLDSLTDDSFNQVTQDPIEEALGLPSSLDSLDQMNQDGGGGDVGN
SSASDLVPPPEETDPTELPKESTAPAPESLTLHDYTTQPVSQEQPAPPVLQTPTPTSGLL
QVSKSQEILSQGNPFMGVSATAVPSSSAGGQPPQSAPKIVILKAPPSSSVTGAHVAQIQA
QGITSTAQPLVAGTANGGKVTFTKVLTGTPLRPGVSIVSGNTVLAAKVPGNQATVQRIVQ
PSRPVKQLVLQPVKGSAPAGNPGATGPPLKPAVTLTSTPTQGESKRITLVLQQPQSGGPQ
GHRHVVLGSLPGKIVLQGNQLAALTQAKNAQGQPAKVVTIQLQVQPPQQKIQIVPQPPSS
QPQPQQPSSAQPVALSSVQQAQIMGPGQGPGQRLSVPLKVVLQPQAGSSQGASSGLSVVK
VLSASEVAALSSPASSAPHTGGKTGIEENRRLEHQKKQEKANRIVAEAIARARARGEQNI
PRVLNEDELPSVRPEEEGEKKRRKKSSGERLKEEKPKKSKTSGTSKTKGKSKLNTITPVV
GKKRKRNTSSDNSDVEVMPAQSPREDEESSIQKRRSNRQVKRKKYTEDLDIKITDDEEEE
EVDVTGPIKTEPILPEPVQEPDGETLPSMQFFVENPSEEDAAIVDKVLSMRIVKKELPSG
QYTEAEEFFVKYKNYSYLHCEWATISQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFN
PDYVEVDRILDESHSIDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVDEGKIREFKRIQS
RHPELKRVNRPQASAWKKLELSHEYKNRNQLREYQLEGVNWLLFNWYNRQNCILADEMGL
GKTIQSIAFLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYHGSLASRQMIQ
QYEMYCKDSRGRLIPGAYKFDALITTFEMILSDCPELREIEWRCVIIDEAHRLKNRNCKL
LDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGDLKTEEQVQK
LQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGAGHTN
MPNLLNTMMELRKCCNHPYLINGAEEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDK
LLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDS
DRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITR
NSYEREMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIEDLLRKGAYAAIMEEDD
EGSKFCEEDIDQILLRRTTTITIESEGKGSTFAKASFVASENRTDISLDDPNFWQKWAKK
ADLDMDLLNSKNNLVIDTPRVRKQTRHFSTLKDDDLVEFSDLESEDDERPRSRRHDRHHT
YGRTDCFRVEKHLLVYGWGRWRDILSHGRFKRRMTERDVETICRAILVYCLLHYRGDENI
KGFIWDLISPAENGKTKELQNHSGLSIPVPRGRKGKKVKSQSTFDIHKADWIRKYNPDTL
FQDESYKKHLKHQCNKVLLRVRMLYYLRQEVIGDQAEKVLGGAIASEIDIWFPVVDQLEV
PTTWWDSEADKSLLIGVFKHGYEKYNTMRADPALCFLEKAGRPDDKAIAAEHRVLDNFSD
IVEGVDFDKDCEDPEYKPLQGPPKDQDDEGDPLMMMDEEISVIDGDEAQVTQQPGHLFWP
PGSALTARLRRLVTAYQRSYKREQMKIEAAERGDRRRRRCEAAFKLKEIARREKQQRWTR
REQTDFYRVVSTFGVEYDPDTMQFHWDRFRTFARLDKKTDESLTKYFHGFVAMCRQVCRL
PPAAGDEPPDPNLFIEPITEERASRTLYRIELLRRLREQVLCHPLLEDRLALCQPPGPEL
PKWWEPVRHDGELLRGAARHGVSQTDCNIMQDPDFSFLAARMNYMQNHQAGAPAPSLSRC
STPLLHQQYTSRTASPLPLRPDAPVEKPPEETAAHVPSLESLTLKLEHEVVARSRPTPQD
YEMRVAPSDTTPLVSRSVPPVKLEDEDDSDSELDLSKLSPSSSSSSSSSSSSSSTDESED
EKEEKLTADRSRSKLYDEESLLSLPMSQDGFANEDGEQMTPELLLLQERQRASEWPKDRV
LINRIDLVCQAVLSGKWPSSRRSQEMVTGGILGSGNHLLDSPSLTPGEYGDSPVPTPRSS
SAASMAEEEVSAVTTAAAQFTKLRRGMDEKEFTVQIKDEEGLKLTFQKHKLMANGVMGDG
HPLFHKKKGNRKKLVELEVECMEEPNHLDVDLETRIPVINKVDGTLLVGEDAPRRAELEM
WLQGHPEFAVDPRFLAYMEDRRKQKWQRCKKNNKAELNCLGMEPVQTANSRNGKRGHHAE
TVFNRVLPGPIAPDSSKKRARRMRPDLSKMMALMQGGGTGSLSLHNTFQHSSSGLQSVSS
LGHSSATSASLPFMPFVMGGAASSPHVDSSTMLHHHHHHPHPHHHHHHHPGLRATGYPSS
PATTTSGTALRLPPLQPEEDEDDEDEDDDDDLSQGYDSSERDFSLIDDPMMPANSDSSED
GDD
NT seq
7752 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccccatcatggatctgtttgatgacccaaatttatttggcctggactctctt
actgatgacagcttcaatcaggttacacaagaccctattgaggaagcccttggactgcca
agctctctggactccttggatcagatgaaccaggatggtggaggtggtgatgtggggaat
tcatcagcaagtgacttggtccccccaccagaggaaacagaccccacagaacttcccaaa
gaatcgacagctccagctccagaatctttaaccttgcatgattataccactcagcccgtc
agccaagagcagccagccccacctgtcttacagacaccgacgccaacgtcaggacttttg
caggtctccaagagccaggagatcctgagccaagggaatcctttcatgggtgtctctgcc
acagctgttccctccagtagtgctggagggcagccacctcagtcagcccctaagattgtt
atccttaaggccccacccagctcctcagtcactggtgcccatgtggcacaaattcaggcc
caaggtatcaccagcacagctcagcccctcgtggctggcacagccaatggtggaaaagtc
acttttaccaaagtgctaaccggcactccccttcgacctggtgtttccattgtctctggt
aatacagtgttggccgccaaggtccctgggaaccaggctactgttcagcgcattgtccag
cccagccgaccagtaaagcagctggtcctacagccagttaagggttcagctcctgctgga
aaccctggggccacagggcccccactgaagcctgcagttacactgacctctacacctacc
cagggtgaatcgaaacgcatcacgctggtcctccagcagccacagtctggaggtccccaa
ggacaccggcatgtcgtgctcgggagtctgccaggcaagatagtgttacagggcaaccag
ctggcagccctgacgcaagccaagaatgcccaggggcagccggccaaagtagtgactatc
cagctgcaggtgcagccgccacagcagaagatccagattgtaccgcagcctccatcgtcg
cagccacagccccagcagccatcctcagcccagccagtggctctttcctctgtgcagcag
gctcagataatgggaccagggcagggcccgggacagagactttcagtaccgctcaaggtg
gtgctgcagccccaggccggctcttcccaaggggcctcttctgggctctccgtagttaaa
gttctaagtgccagtgaagtggcagctctgtcctcaccagcaagctctgctcctcatact
gggggcaagacgggaatcgaggaaaaccgtaggctggagcaccagaagaagcaagagaaa
gcaaatcggattgtagcggaggccattgctagggcccgtgcccggggtgaacagaacata
cctcgagtcctgaatgaggatgagttgcctagcgttcggcctgaggaggaaggtgaaaag
aaacgcaggaagaagagcagtggggagaggctcaaggaagaaaagccaaagaagagcaaa
acatctggtacctccaaaaccaagggcaagagtaagctaaacaccatcactcctgtggtg
ggtaagaagagaaagcgtaatacctcatctgataattcagatgtggaagtcatgcctgca
cagtcaccccgggaagatgaagaaagcagcattcagaagagacgctcaaaccgccaagtt
aaacggaaaaaatatacagaggatctggatataaagatcacagatgatgaagaagaagaa
gaagtagatgtaactggtccaatcaaaactgagcctatcctgcctgagccagtgcaggaa
ccagatggcgagactttgccttccatgcagttctttgtggagaatcccagtgaagaagat
gcagccattgtagacaaagtgctttccatgcgtattgtgaagaaggagcttccttctgga
caatatactgaagcagaagaattctttgtcaagtacaagaactactcctatctacactgt
gagtgggctaccatctcccaactagagaaggataagaggatccatcaaaaactaaagcgc
ttcaaaaccaaaatggctcagatgagacacttcttccatgaggacgaagagcccttcaac
ccagactatgtagaggtggataggatattggatgagtctcacagcattgacaaggacaat
ggggagcctgtaatttactacttggtaaaatggtgctctctgccctatgaggatagtaca
tgggagctaaaagaggatgttgatgagggcaagattcgagaatttaaacggatccagtca
aggcacccagagctcaaaagggtgaatcgtccacaagcaagtgcctggaagaagttggag
ttgtcacatgagtataaaaacagaaaccaattaagggaatatcagttggaaggggtcaat
tggctgctctttaattggtataacaggcagaactgcatcctggctgatgagatgggattg
ggcaaaaccattcagtccattgccttcttacaggaggtatataatgtgggcatccatggc
cccttcctggtcattgccccactgtccacaattactaactgggagagagaattcaacacg
tggacagagatgaacactattgtgtaccatggcagcctagccagccggcagatgattcaa
cagtatgaaatgtactgcaaagattcacgggggcgcctcatcccgggtgcatacaagttt
gatgccctgatcaccacttttgagatgattttgtcagactgtcccgagcttcgtgagatt
gaatggcgttgtgtcatcattgatgaagcccatcgactaaagaaccgtaattgcaagctg
cttgatagtctcaagcacatggacctggagcacaaagtgctactcacaggaacaccattg
caaaatactgtggaggaactgtttagcctgcttcatttcttggaaccttcacagtttcca
tcagaatcagagttcctcaaggactttggggatctcaagacagaggaacaggttcaaaag
ctacaggccattctcaagccaatgatgctgagaagactcaaagaggatgttgaaaagaac
ctggcacctaagcaggaaaccattattgaagtagagctgaccaacattcagaagaaatac
tatcgggctattttggagaagaatttctcctttctttccaaaggggcaggccatactaac
atgcctaatctactcaatacaatgatggagttgcgcaaatgctgcaaccacccatatctc
atcaatggtgcagaagaaaaaatcctaacagaatttcgagaagcttgccatatcatacct
catgacttccacttgcaggcaatggttcgttcagctggcaaattggttcttattgacaag
ttacttccgaaacttaaagctggtggccataaggttctgatcttctcccagatggtacgc
tgcctagatatcctagaggattatctaatccagaggaggtacttgtatgagcgtatcgat
gggcgagttagaggcaaccttcggcaggcggctattgaccgcttcagcaaacctgactca
gaccgatttgtctttttgctatgcacccgggctggtggacttggaattaatctcacagct
gctgatacctgcatcatctttgattcagattggaatccgcaaaatgacctgcaggcccaa
gcacggtgtcatcgaattgggcagagtaaagctgtgaaggtgtaccgtctcatcactcgt
aattcttatgagagagagatgtttgataaggctagcctcaagttgggattggataaagct
gtgcttcagtccatgagtggtcgggatggcaacattactggaatccagcagttctccaag
aaggagattgaagatctcttacgaaaaggagcatatgcagccataatggaggaagatgat
gagggctccaagttttgtgaagaggacattgaccagatcttgttaagacgaaccactacc
atcaccattgaatctgaaggaaagggttctacgtttgccaaggcaagctttgtggcttct
gaaaataggactgatatttctctggatgaccccaacttttggcaaaagtgggccaaaaag
gctgacctggacatggatctactcaatagcaagaataacttggtgattgacacacctaga
gtacgaaaacagacccgccacttcagcactctgaaagatgatgacctagtggaattctct
gatttggaaagtgaagatgatgagcggccacgctctcgccgacatgaccgtcatcatacc
tatgggcgcactgactgctttcgggtggaaaagcacctcctggtatatggttggggacgg
tggcgagatattctgtctcatggacgcttcaagcgacggatgactgaaagagatgtggaa
acaatttgccgggccatccttgtgtactgtcttttacactatcgtggggatgaaaatatc
aaaggcttcatctgggacttgattagccctgctgaaaatggcaagacaaaagaattgcag
aatcattcaggtctgtctatccctgtgccccgtggacgcaaggggaaaaaagtaaagtca
caaagcacttttgatatccataaggcagattggatccggaaatataaccctgatactctg
ttccaagatgagagttataagaagcacttgaaacatcagtgtaacaaggtcctgttgcgg
gtacgaatgctatactatctgagacaggaggttattggagaccaggcagagaaggtgtta
gggggtgctattgccagtgagattgacatatggttcccagtagtggatcagctggaggtt
ccaacaacatggtgggacagtgaggctgataagtccctgctcattggagtctttaagcat
ggctatgaaaaatataatactatgagggcagacccagccttgtgcttcctggaaaaggct
ggccgaccagatgacaaagccattgcagcagaacatcgagtgttggataatttttctgac
atagtggaaggggttgactttgataaagattgtgaagatcctgaatataaaccactccag
ggtcccccaaaggatcaagatgatgagggtgatcccttgatgatgatggatgaggagatc
tcagttatagatggagatgaagcccaggtgacccaacagccaggccatctattctggcct
ccaggctctgctttgacagctaggcttcggcgcctagtaacagcctatcagcgcagctac
aagagagaacagatgaagatagaggctgcagaacgtggggatcggagaaggcggcgttgt
gaggcagccttcaagctaaaagaaattgcacggcgagagaaacagcaacgatggacaagg
cgtgaacaaactgatttctatcgagtagtttctacctttggtgtggaatatgaccccgat
accatgcagttccattgggatcgattccgcacttttgcccgactggacaaaaaaacagat
gaaagccttaccaagtacttccatggctttgtggccatgtgccgccaagtgtgccgcctt
cccccagcagctggagatgaacccccagaccctaatctgttcattgagcccatcactgag
gaaagggcctcacggactctctaccgtattgaattgcttcggcgcttacgggagcaagtt
ttatgccaccctcttttggaagatcggctggcattatgtcagcctccaggtcctgaattg
cccaaatggtgggagcctgttcggcatgatggggagcttctacgaggggcagcccgccat
ggggtgagccaaacagactgcaacatcatgcaggacccagacttctcttttctggctgcc
cgtatgaattatatgcagaaccatcaggcaggagcaccagctccatccctatcacgctgc
tctactccactgctacaccagcagtatacctcgcgcactgcctcaccactgcccctgcgc
ccagatgctcctgttgaaaagccacctgaggagacagctgcccacgtccccagtctggag
agtctgactttaaagctagagcatgaggtggtggccaggagccgaccaaccccacaagac
tatgagatgcgagtagccccctctgatactacccctctggtttcccggagtgttccacca
gtcaaactggaggatgaggatgattcagactctgagctggacttgagcaagctgtcacca
tcatcctcttcttcctcatcctcatccagctccagctccagcactgatgagagtgaggac
gagaaggaagagaagctaactgctgaccggtcccgctcaaagctctatgatgaagaaagt
ctcctgtccctccctatgtcccaagatggattcgcaaatgaagatggagaacaaatgacc
cctgagctgctgctgctacaagaaagacaaagagcttctgagtggcccaaggatcgtgtc
ctgataaaccgtattgacctcgtctgccaggccgtactctcagggaagtggccttctagc
cgccggagccaagaaatggtaacaggaggaattttggggtcaggcaaccacttgctagac
agtccctcattgactccaggagaatatggtgactctccggtccccacaccacgaagtagc
agcgcagcttccatggcagaggaggaagtgtccgccgtaaccacagcggcagctcagttc
accaaacttcgccgaggcatggatgagaaggagtttacagttcagatcaaagatgaggaa
ggattgaagttaacattccagaagcacaagttgatggctaatggagtaatgggagatgga
catcctctttttcacaagaagaaagggaacagaaagaagctagttgagctggaggtggag
tgcatggaagagcctaatcaccttgatgtggacctggagacccggatccctgtcatcaat
aaggtggatgggactttgctggtgggtgaggatgcccctcgccgggctgaactggagatg
tggttacagggtcatccagagttcgctgtcgatccccgatttctagcgtatatggaggat
cgcagaaaacagaagtggcagagatgtaaaaaaaataataaggcagaattgaactgtttg
ggaatggaaccagtacagacagctaactctaggaatggaaaaaggggtcatcatgctgaa
acagtgttcaaccgggttttgccagggcctattgcaccggacagcagcaagaagcgggcc
cgtaggatgcgaccagacctttctaagatgatggccctgatgcagggtggaggcactggg
tccctgtctctgcataataccttccaacacagcagtagtggcctgcagtctgtgtcatct
ctgggtcacagcagtgccacttctgcatctttgccttttatgccgtttgtgatgggtggt
gcagcatcatcccctcatgtagactccagcaccatgcttcatcaccaccaccaccacccc
cacccccaccatcaccaccatcaccatccaggcctgagagccactggctacccttcttca
ccagccactaccacctctggtactgccttgaggttgccaccactgcagcctgaggaggat
gaggacgatgaggatgaagatgatgatgatgatttatctcagggctatgatagctcagaa
agggacttctcactcattgatgatcctatgatgccagccaactcagactccagcgaagat
ggtgatgactga
DBGET
integrated database retrieval system
