Lipotes vexillifer (Yangtze River dolphin): 103077329
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Entry
103077329 CDS
T03090
Symbol
TNC
Name
(RefSeq) tenascin isoform X1
KO
K06252
tenascin
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve04151
PI3K-Akt signaling pathway
lve04510
Focal adhesion
lve04512
ECM-receptor interaction
lve04518
Integrin signaling
lve05165
Human papillomavirus infection
lve05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
103077329 (TNC)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103077329 (TNC)
04518 Integrin signaling
103077329 (TNC)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103077329 (TNC)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
103077329 (TNC)
09172 Infectious disease: viral
05165 Human papillomavirus infection
103077329 (TNC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
lve00536
]
103077329 (TNC)
Glycosaminoglycan binding proteins [BR:
lve00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103077329 (TNC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
EGF_TEN
Fibrinogen_C
EGF_Teneurin
EGF_2
EGF_Tenascin
Fn3_Dep-1_3rd
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
Fn3_Dep-1_2nd
Fn3_VIN3
DUF7949
DUF4998
NDNF
fn3_2
TauD
EGF
YPEB_PepSY1-2
Motif
Other DBs
NCBI-GeneID:
103077329
NCBI-ProteinID:
XP_007449784
UniProt:
A0A340WRT4
LinkDB
All DBs
Position
Unknown
AA seq
2200 aa
AA seq
DB search
MGVATRLLAGIFLALLALPAEGGVLKKVIRHKRQSGVNVTLPEENQPVVFNHVYNIKLPV
GSQCSVDLESASGEKDLVPLSEPRESFQEHTVDGENQIVFTHRINIPRRACGCAAAPDIK
ELLSRLEELENLVSSLREQCTLGAACCFQPAEGHLDTKPFCSGRGNFSTEGCGCVCEPGW
KGPNCSEPECPGNCHLRGQCLDGQCVCDKGFTGEDCGQLACPSDCNDQGKCMNGTCVCFE
GYSGVDCSQEPCPVPCSEEHGRCVDGRCVCQDGFAGEDCNEPLCLHNCQGRGSCVENECV
CDEGFTGDDCGELVCPNDCFDRGRCVNGTCYCDEGFAGEDCSQLACPHACQGRGRCDEGQ
CVCDEGFAGADCSEKRCPSDCHDRGRCLDGHCECDDGFTGADCGELRCPRDCSGHGRCVN
GQCVCDEGRTGEDCGQLRCPNDCHGRGRCVQGRCECELGFQGYDCGEMSCPHDCHQHGRC
LNGMCVCDDAYLGEDCRELRCPRDCSQRGRCVDGRCVCENGFAGPDCADLSCPGDCHGRG
RCVDGQCVCHEGFTGKDCGQRRCPDDCHGQGRCVDGQCVCHEGFTGLDCGQRSCPNDCSN
WGQCVSGRCICNEGYTGEDCSQVSPPKDLIVTEVTEETINLAWENEMRVTEYLIVYTPTH
EDGLEMQFRVPGNQTSTTIQELEPGVEYLIRVFAVLENKKSIPVSARVATYLPTPEGLKF
KSIKETSVEVEWDPVDIAFETWEVIFRNMNKEDEEEITKSLRRPETTYRQTGLAPGQEYE
ISLHIVKNNTRGPGLKRVTTTRLDAPSQIEVKDVTDTTALITWSKPLAEIDSIELTYGIK
DVPGDRTSIDLTHEENQYSIGNLKPDTEYEVSLISHRADMSSSPTRETFTTGLDAPRNLR
RVSQTDNSITLEWRNVKAAADSYRIKYAPISGGDHAEVEVPRRQQTTTKTTLTGLRPGTE
YGIGVSAMKGDKESDPATINAATDLDAPKDLRVSESTETSLTLLWQTPLAKCDRYRLNYS
LPSGQPVEVQLPRGTTSYVLKGLEPGQEYTILLTAEKGRHKSKPARVQASTDPAPEMENL
TVTEAGWDGLKLNWTTADQAYEHFVIQVQEANRVEAAQNLTVPGSLRAADIQGLKAATPY
RVTIYGVIRGYRTPALSAEASTGEAPHLGEVTVSEVGWDALKLHWTAPEGAYERFLIQVQ
ETDTEEAAQNLTVPGGLRSVDLPGLKAATRYSVTIRGVTRDFSTTPLSVEVLTEEVPDLG
NLTVTEVSWDALRLDWTPDGIYEQFVIEIREADQAQEAHSLTVPGSLCSAEIPGLRAGTP
YIITLRGEVRGRSTQPLAVEVITAELPQLGHLAVTEAGWDGLKLNWTTADQAYEHFVIQV
QEANRVEAAQNLTVPGSLRAADIQGLKAATPYRVTIYGVIRGYRTPMLSAEASTAGEPEI
GNLNVSDITPESFNLSWTATDGAFKTFTIEIIDSNRFLETMEYNVSGAERTAHISGLRPN
NDFIVYLSGLAPSIRTKTISATATTEALPLLENLTISDINPYGFTVSWMASENAFDRFLV
TVVDSGKLLDPQEFTLSGTQRKLELRGLITGIGYEVMVSGFTQGHQTKPLRAEIVTEAEP
EVDNLLVSDATPDGFRLSWTADEGVFDSFVLKIRDTKKQSEPLEITLLAPERTRDITGLR
EATEYEIELYGISSGRRSQPVSAIATTAMGSPKEIAFSDITENSATVSWEAPATQVESFR
VTSVPTAGGTPSVVTVDGTKTQTRLLRLLPGVEYLVSVIALKGFEESKPVSGMLTTALDG
PSGLVTANITDSEALATWQPAIAPVDNYVISYTGEREPEITRKVSGNTVEYALTNLEPAT
EYTLRIFAEKGPQKSSTITTKFMTDLDSPRHFTATEVQSETAVLTWRPPRASVTGYLLVY
ESVDGTTKEVVVDPDTTSYSLAELSPSTHYMAKIQALNGPLRSKIIKTTFTTTGVLYPFP
RDCSQAMLNGDTTSGVYTIYLNNDKTQKQEVFCDMTSDGGGWIVFLRRKNGREDFYRNWK
AYTAGFGDLKEEFWLGLDTLNKITAQGQYELRVDLRDHGQSAYAVYDKFSVGDARTRYRL
KVEGYSGTAGDSMAYHNGRSFSTFDKDTDSAITNCALSYKGAFWYKNCHRVNLMGRYGDN
NHSQGVNWFHWKGHEYSIQFAEMKLRPSNFRNLEGRRKRA
NT seq
6603 nt
NT seq
+upstream
nt +downstream
nt
atgggggtcgcgactcggctgttggcaggcatcttcctagctctgcttgcccttcctgcc
gagggtggcgtcctcaagaaagtcatccggcacaagcgacagagtggggtgaatgtcacc
ctgccagaggagaaccagccggtggtgtttaatcatgtctacaacatcaagctgcctgtg
gggtcccagtgctcggtggatctggaatcagccagtggggagaaagacttggtcccactg
tcagagcccagggagagcttccaggagcacacggtagatggggaaaaccagatcgtcttc
acacaccgcatcaacatcccccgccgggcctgtggttgtgccgctgctcctgatatcaag
gagcttctgagcagactggaggagctagagaacctggtgtcttctctgcgggagcagtgc
accttgggagcagcctgctgcttccagcctgccgaaggccacctggacaccaagcccttc
tgcagcggccggggcaacttcagcactgaaggctgtggctgtgtgtgtgaaccgggctgg
aaaggccccaactgctctgagcctgaatgtccaggcaactgtcacctgcgaggccagtgc
ctggacgggcagtgcgtgtgtgacaagggcttcacgggggaggactgcggccagctggcc
tgtcccagtgactgcaatgaccagggcaagtgcatgaacgggacctgcgtctgcttcgaa
ggctactcgggggtggactgcagccaggagccctgcccggtgccctgcagcgaggagcac
ggccgctgcgtggacggccgctgtgtgtgccaggacggcttcgccggcgaggactgcaac
gagcccctgtgtctgcacaactgccaaggccgtgggagctgcgtggagaacgagtgcgtg
tgcgatgagggcttcacgggcgacgactgtggtgagctcgtctgccccaacgactgcttc
gaccgcggccgctgcgtcaatggcacctgctactgcgacgagggcttcgcgggggaggac
tgcagccagctcgcctgcccccacgcctgccaaggccgcggccgctgcgacgagggccag
tgcgtgtgcgacgagggcttcgcgggtgcggactgcagtgagaagcgctgtccctctgac
tgccatgaccgcggccgctgcctggacgggcactgcgagtgcgacgatggcttcacgggt
gcggactgcggcgagctccggtgtccccgcgactgcagcggccatggccgctgcgtcaac
gggcagtgcgtgtgcgacgagggtcgcaccggggaggactgcgggcagctgcggtgcccc
aacgactgtcacggccgcgggcgctgcgtgcaggggcggtgcgagtgcgaactcggcttc
cagggctatgactgtggcgagatgagctgcccccatgactgtcaccagcacggccgctgc
ctgaatggcatgtgtgtctgtgatgacgcctacctgggtgaggactgccgggagctgcgc
tgcccccgggactgcagccagcggggccgctgcgtggacgggcggtgcgtgtgcgagaac
ggcttcgccggccccgactgcgcagacctctcctgtcccggcgactgtcacggccggggc
cgctgcgtggacggccagtgcgtgtgccatgagggcttcacgggcaaggactgtgggcag
cgcaggtgtcccgacgactgtcacggccagggccgctgtgtggacggccagtgcgtgtgc
cacgagggcttcactgggttggactgcgggcagcgctcctgccccaacgactgcagcaac
tgggggcagtgcgtctccggccgctgcatctgcaatgagggctacaccggagaagactgc
tcccaagtgtcccctcccaaagacctcatcgtgacagaagtgacagaagagaccataaac
ctggcctgggaaaatgagatgcgggtcacagagtacctcatcgtgtacacgcccacccat
gaagacggcctagaaatgcagttccgtgtccctggaaaccagacatccaccaccatccag
gagttggagcctggcgtggagtaccttatccgcgtgtttgccgtcctagagaacaagaag
agcattcctgtcagcgccagggtggccacttacctgcctacacctgaaggtctaaaattc
aagtctatcaaggagacatctgtggaagtggagtgggatcctgtggacatcgcttttgaa
acgtgggaggtcatcttccggaatatgaataaagaagatgaggaagagatcaccaaaagc
ctgcggaggccggagaccacataccggcaaactggcctggcccctgggcaagagtatgag
atatctttgcacatcgtgaaaaacaatacccggggcccaggcctgaagagggtgacaacg
acccgcttggacgcccccagccagatcgaagtgaaagacgttacggacaccaccgctctg
atcacctggtccaagcccctggccgagatcgacagcattgagctcacatacgggatcaaa
gatgtgccaggcgaccgaaccagcatcgacctcacacacgaggagaaccagtactccatc
gggaacctgaagccagacacagagtacgaggtttccctcatctcccacagggccgacatg
tctagcagccccaccagagagaccttcacaacaggcctggatgcgcccagaaatctccgc
cgcgtctcccagacagacaacagcatcaccctggagtggaggaacgtcaaggcggccgcc
gacagttacagaattaagtacgcacccatctctggaggtgaccatgccgaggtagaagtc
cccaggaggcaacaaaccacaaccaaaactacactcacaggtctgaggccaggaactgaa
tatggtattggagtgtctgccatgaagggggacaaggagagtgacccagccaccatcaat
gcggccacagacctggatgcacccaaggaccttcgggtttctgaatctacggagaccagc
ttgaccctgctctggcagacaccactggccaagtgtgaccgttaccgcctaaactacagt
cttccctcgggccagccagtggaggtgcagctccccagaggcaccacctcctacgtcctg
aaaggcctggaacctgggcaggaatacaccatcctcctcacagcagagaagggcaggcac
aagagcaagcctgcacgggtacaggcatccacagaccccgcccctgaaatggaaaacctc
accgtgaccgaggctggctgggatggcctcaaactcaactggaccacagctgatcaggcc
tatgagcactttgtcattcaggtgcaggaggccaacagggtggaggcagctcagaacctc
acggtgcccggcagcctgcgggctgcggacatccagggcctcaaggccgccaccccttac
agagtcaccatctacggggtgatccggggctatagaacaccagcgctctctgctgaggcc
tccacaggagaagctccccatttgggagaggtcacggtgtccgaggtgggctgggatgcc
ctcaaactccactggacggctccggaaggagcctacgagcggtttctcattcaggtgcag
gaaactgacacagaggaggcagcccaaaacctcactgtcccgggagggctgaggtccgtg
gacctgcctgggctcaaggcagccactcgctatagcgtcaccatccgcggggtgactcgg
gacttcagcacaacccctctctctgttgaagtcttgacagaggaggttccagatctgggg
aacctcactgtgactgaggttagctgggatgccctcagactggactggaccccagatggg
atctatgagcagtttgtcattgagatccgggaggctgaccaggcccaagaagctcacagt
ctcacggttcctggcagcctgtgctccgcggaaatcccaggcctcagggctggtacccct
tatataattaccctgcgcggcgaggtcaggggccgcagcactcaaccccttgctgtggag
gtcatcacagcggagctcccccagctgggacacttagccgtgaccgaggctggctgggat
ggcctcaaactcaactggaccacagctgaccaggcctatgagcattttgtcattcaggtg
caggaggccaacagggtggaggcagctcagaacctcacggtgcccggcagcctgcgggct
gcggacatccagggcctcaaggccgccaccccttacagagtcaccatctacggggtgatc
cggggctatagaacaccaatgctctctgctgaggcctccacagccggagaacctgaaatc
ggaaacttaaatgtttccgacatcactcctgagagcttcaatctctcctggacagctacc
gatggggccttcaagacctttaccattgaaattattgattccaataggttcctggaaacg
atggaatataacgtctctggtgctgaacgaactgctcacatctcagggctccgccctaat
aatgattttattgtctacctctctggactcgctcccagcatccggaccaaaaccatcagt
gccacggccaccacagaggccctgccccttctggaaaacctaaccatttccgacattaat
ccctacgggttcacagtttcctggatggcatcggagaatgcctttgacagattcctagta
acggtggtggattctgggaagctgctggacccccaggaattcacactttcaggaacccag
aggaagctggagcttagaggcctcataaccggcattggctatgaggtcatggtctctggc
ttcacccaagggcaccaaaccaagcccttgagggctgagattgttacagaagccgagcca
gaagttgacaaccttctggtttcagatgccaccccagacggtttccgtctgtcctggaca
gctgatgaaggggtcttcgacagctttgttctcaaaatcagagacaccaaaaagcagtct
gaaccactggaaataaccctacttgcccccgaacgtaccagggacataacaggtctcaga
gaggccactgaatacgaaattgaactctatggaataagcagtggaaggcgatcccagcca
gtcagtgctatagcaacaacagccatgggctccccgaaggaaatcgctttctcagacatc
actgaaaactcagccactgtcagctgggaggcacccgctacccaggtggagagtttccgg
gttacctctgtacccactgcaggaggtacaccctcagtggtaactgtggatgggaccaag
actcagaccagactgctgagactcttacctggagtggagtacctcgtcagcgtcatcgcc
ctgaagggctttgaagaaagcaagcctgtctcggggatgctcaccacagctctggatggc
ccatctggcctggtgacagccaacatcaccgactcagaagccttggccacgtggcagccg
gccatcgcccctgtggacaattatgtcatctcctacacaggggagagagagccagaaatt
acccgcaaggtgtccgggaacacggtggagtatgcgctgaccaacctcgagcctgccacg
gaatacacgctgaggatctttgcagagaaagggccccaaaagagctcaactatcaccacc
aagttcatgacagacctcgactctccaagacacttcactgctactgaggttcagtcggaa
actgccgttctcacctggagacctccccgggcatctgtcactggttacctattggtgtat
gaatctgtggacggtacaaccaaggaggttgttgtggatccagacaccacctcttacagc
ctggcagagctgagcccatcgacccactacatggccaagatccaggcactgaatgggccc
ctgagaagcaagatcatcaagaccaccttcaccacaactggagtcctgtacccattcccc
agggactgctcccaagccatgctgaatggagacacgacctctggcgtctacaccatttat
ctgaacaacgacaagacccaaaagcaggaagtcttctgtgacatgacctctgacgggggt
ggatggatcgtgttcctgagacgcaaaaatggacgtgaggatttctatcgaaactggaag
gcctacactgctggatttggggacctaaaagaagaattctggcttgggctggacaccctg
aacaaaatcacagcccaagggcagtacgagctccgggtggacctgcgggaccacgggcag
tcagcctacgccgtctacgataagttcagcgtgggagacgcccggactcgctaccggctg
aaggtggaggggtacagcgggacagcaggtgactccatggcctaccacaatggcagatcc
ttctccacctttgacaaggacacggactcggccatcaccaactgtgccctgtcctacaag
ggggctttctggtacaagaactgccaccgcgtcaacctgatggggagatacggggacaat
aaccacagtcagggtgttaactggttccactggaagggccacgagtattcaatccagttt
gctgagatgaagctgagacccagcaacttccgaaacctcgaaggcaggcgcaaacgggca
taa
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