KEGG   Lipotes vexillifer (Yangtze River dolphin): 103077382
Entry
103077382         CDS       T03090                                 
Symbol
ALYREF
Name
(RefSeq) THO complex subunit 4
  KO
K12881  THO complex subunit 4
Organism
lve  Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve03013  Nucleocytoplasmic transport
lve03015  mRNA surveillance pathway
lve03040  Spliceosome
lve05014  Amyotrophic lateral sclerosis
lve05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:lve00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103077382 (ALYREF)
  09122 Translation
   03013 Nucleocytoplasmic transport
    103077382 (ALYREF)
   03015 mRNA surveillance pathway
    103077382 (ALYREF)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    103077382 (ALYREF)
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    103077382 (ALYREF)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lve03019]
    103077382 (ALYREF)
   03041 Spliceosome [BR:lve03041]
    103077382 (ALYREF)
Messenger RNA biogenesis [BR:lve03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     103077382 (ALYREF)
    TREX complex
     103077382 (ALYREF)
Spliceosome [BR:lve03041]
 Complex C
  Other components
   EJC/TREX
    103077382 (ALYREF)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    103077382 (ALYREF)
SSDB
Motif
Pfam: RRM_1 FoP_duplication LEM
Other DBs
NCBI-GeneID: 103077382
NCBI-ProteinID: XP_007462446
UniProt: A0A340XM26
LinkDB
Position
Unknown
AA seq 302 aa
MADKMDMSLDDIIKLNRSQRGGRGGGRGRGRAGSQGGRGGGAQAAARVNRGGGPIRNRPA
IARGAAGGGGRNRPAPYSRPKQLPDKWQHDLFDSGFGGGAGVETGGKLLVSNLDFGVSDA
DIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQL
VTSQIDTQRRPAQSINRGGMTRNRGSGGFGGGGGTRRGTRGGSRGRGRGTGRSSKQQLSA
EELDAQLDAYNARVGGCGAVVLSLQLPVHCLHSQKCDLAVLILQHNPLMFFVFGVIKEGA
LC
NT seq 909 nt   +upstreamnt  +downstreamnt
atggccgacaaaatggatatgtctctggacgacatcattaaactgaaccggagccagcgc
ggcggccgcggcgggggcaggggccgcggccgggctggctcccagggcggccgcggaggc
ggggcgcaggccgcagcgcgagtgaaccgaggcggcggacccattcggaaccggccggcc
atcgcccgcggcgcggcgggcggcggcggcagaaaccggccggcgccctacagcaggccg
aaacaacttcctgacaaatggcaacatgatcttttcgatagcggttttgggggtggtgcc
ggcgtggagaccggtggcaaactgctggtgtcaaatctggattttggagtgtctgacgct
gatattcaggaactctttgctgaatttggaactctgaagaaggcggctgtgcactacgac
cgatccggccgcagtttaggaacagctgatgtgcactttgagcggaaggcagatgcacta
aaagctatgaaacagtacaacggtgtccctttggatggccgccccatgaacattcagctt
gtcacctcacagattgacacacagcggagacctgcacagagcataaacagaggcgggatg
actagaaaccgtggttcgggaggttttggtggtggcggtggcacccggagaggcacccgt
ggaggcagccggggcagaggcagaggaaccggcaggagttcaaagcagcagctttctgca
gaggaattggacgcccagctggatgcttataatgcaagagtgggaggatgtggagcagtg
gtcctcagcctgcagctgcctgtgcactgcctgcacagccagaaatgtgatttagcagtt
ctgattttgcaacataatcccctcatgtttttcgtctttggtgtcatcaaggaaggagca
ctgtgttag

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