Lipotes vexillifer (Yangtze River dolphin): 103077774
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Entry
103077774 CDS
T03090
Symbol
DDX55
Name
(RefSeq) ATP-dependent RNA helicase DDX55
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lve03009
]
103077774 (DDX55)
Enzymes [BR:
lve01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103077774 (DDX55)
Ribosome biogenesis [BR:
lve03009
]
Eukaryotic type
Pre-60S particles
Helicases
103077774 (DDX55)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
CTT_SPB4
Cas3-like_C_2
Helicase_C_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
103077774
NCBI-ProteinID:
XP_007448725
UniProt:
A0A340WNX9
LinkDB
All DBs
Position
Unknown
AA seq
600 aa
AA seq
DB search
MEHVTEGSWESLPVPLHPRVLGVLRELGFPYMTPVQSATIPLFMKNKDVAAEAVTGSGKT
LAFIIPVLEILLRREEKLKKSQVGAIIITPTRELAVQIDEVLSHFMKPFPQFSQILWIGG
RNPGEDVARFKEHGGNIIVATPGRLEDMFRRKAEGLDLASCVRSLEVLVLDEADRLLDMG
FEASINTILEFLPKQRRTGLFSATQTQEVENLVRAGLRNPVRISVKEKGAAASSTQKTPS
RLENYYMVCKADEKFNQLVHFLRNHKQEKHLVFFSTCACVEYYGKALEALVKGVKVMCIH
GKMKYKRNKIFTEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTA
RIGCRGSALVFLLPMEESYVSFLAINQKCPLQEMKVQENTVDLLPKLKSMALADRAVFEK
GMQAFVSYIQAYAKHECNLIFRLKDLDFASLARGFGLLRMPKMPELRGKQFPDFVPVDVS
TDTIPFKDKIREKQRQKLLEQQRKEKTENEGRRKFIKNKAWSKQKAKKEKKKKRNEKRKR
EEGSDIEDEDMEELLNDTRLLKKFKKGKITEEELEKGLLTSGTTSVKTADLGISDLEDDC
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggagcacgtgacggagggttcctgggagtcgctcccggtgccgctgcacccgcgggtg
ctgggtgtcctgcgggagctgggtttcccgtacatgacgccggtgcagtcagcaaccatc
cctctgttcatgaaaaacaaagatgttgctgcagaagcggtcacaggtagtggcaaaaca
ctcgctttcatcatccccgtcctggaaattctcctgagaagggaagagaagttaaaaaag
agtcaggttggtgccataatcatcacacccacgcgagagctggctgttcagatagatgag
gtcctgtcgcatttcatgaagcccttcccacagttcagccagattctctggatcggaggc
aggaatcctggagaggatgttgcgaggtttaaggaacatggtgggaacatcattgtggca
accccaggccgcctggaggacatgttccgaaggaaggcagagggcctggatctggccagc
tgcgtgaggtccctggaggtcctggtgttggatgaagcggacaggcttctggatatgggg
ttcgaggcgagcataaacaccatcttggagtttttgccgaagcagaggagaacgggcctc
ttctcggccactcagacacaagaagtggagaacctggtgagagcaggcctccggaaccct
gtgcgcatctcggtgaaggagaagggcgcggcggccagcagcacgcagaagaccccctcc
cgcctggagaactactacatggtatgtaaggcagatgagaaatttaatcagctggtacat
tttcttcgaaatcataagcaggaaaaacacctggtcttcttcagcacttgcgcctgcgtg
gagtactatggaaaggctctggaggccctggtgaagggcgtgaaggtaatgtgcattcac
ggaaagatgaaatataagcgcaataagatcttcacggagttccgcaaattgcaaagtggg
attttagtgtgcactgacgtgatggcccgaggaatagatattcctgaagtaaactgggtt
ttgcagtacgaccctcccagcaatgccagtgcctttgtgcatcgctgtggccgcacagcc
cgcattggctgccgcggcagcgcgcttgtgtttctccttcccatggaagagtcgtacgtc
agtttccttgcaattaaccagaaatgccccctgcaggagatgaaagtccaggagaacaca
gtagacctccttccaaagctcaagtccatggccctggctgacagagctgtgtttgaaaag
ggcatgcaagcttttgtgtcgtacatccaggcttatgcaaagcatgagtgtaacctcatc
ttcagattaaaggatctcgattttgcaagtcttgctcgaggttttggcctgctgaggatg
cccaagatgccagagctgagaggaaagcagtttccagatttcgtgcctgtggacgtcagt
acagacaccattccatttaaagataaaatcagagaaaagcagaggcagaagctattggag
caacaaagaaaagagaaaacagaaaatgaagggaggagaaaattcataaaaaataaagct
tggtcaaagcagaaggccaaaaaggaaaagaagaaaaaacggaatgaaaaaaggaaaagg
gaagagggttctgatatcgaagatgaggacatggaagaacttcttaatgacacaaggctc
ttgaaaaagtttaaaaaaggcaaaattactgaagaagaactcgagaaggggctgttgaca
agtggcacaacatcagtcaagacagcagatttggggatctcagatttggaagatgactgc
tga
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