Lipotes vexillifer (Yangtze River dolphin): 103077986
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Entry
103077986 CDS
T03090
Symbol
COL6A2
Name
(RefSeq) collagen alpha-2(VI) chain isoform X1
KO
K06238
collagen type VI alpha
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve04151
PI3K-Akt signaling pathway
lve04510
Focal adhesion
lve04512
ECM-receptor interaction
lve04820
Cytoskeleton in muscle cells
lve04974
Protein digestion and absorption
lve05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
103077986 (COL6A2)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103077986 (COL6A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103077986 (COL6A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
103077986 (COL6A2)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
103077986 (COL6A2)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
103077986 (COL6A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lve04147
]
103077986 (COL6A2)
00536 Glycosaminoglycan binding proteins [BR:
lve00536
]
103077986 (COL6A2)
Exosome [BR:
lve04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
103077986 (COL6A2)
Glycosaminoglycan binding proteins [BR:
lve00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103077986 (COL6A2)
Hyaluronan
Extracellular matrix or blood plasma proteins
103077986 (COL6A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Motif
Other DBs
NCBI-GeneID:
103077986
NCBI-ProteinID:
XP_007452544
UniProt:
A0A340WZQ2
LinkDB
All DBs
Position
Unknown
AA seq
1027 aa
AA seq
DB search
MSGRRDAAKMLPGPCSALLLWGLLGAVHAQQQEVISPSTSERNSCPEKADCPIHVYFVLD
TSESITMQSPTDSLLYHMQQFVLQFISQLQDELYLDQVALSWRYGGLHFSDLVEVFSPPG
SDRASFSKSLQGISSFRRGTFTDCMLANMTQEVRRHVGKGVINFAVIITDGHVTGSPCGG
IKLQAERAREEGIRLFAVPPNLKLNEQGLRDIANTPHELYRNNYATMRPDSTEIDEDTIN
RIIKVMKHEAYGECYKVSCLEIPGPPGPKGYRGQKGAKGNMGEPGEPGQKGRQGDPGIEG
PIGFPGPKGVPGFKGEKGEFGAEGRKGAPGLAGKNGTDGQKGKLGRIGPPGCKGDAGDRG
PDGYVGEAGSPGEPGDQGSKGDPGRPGRRGPPGENGAKGSKGYQGNTGAPGSPGLKGAKG
GPGPRGPKGEPGRRGDPGTKGSPGSDGPKGEKGDPGPEGPRGLAGEVGNKGAKGDRGLPG
PRGPQGTVGEPGKQGSRGDPGDAGPRGDSGQPGPKGDPGRPGFSYPGPRGAPGEKGEPGP
PGPEGGRGDFGSKGEPGRKGQKGEPADPGPPGEPGPRGPRGDPGPEGEPGPPGDPGLTEC
DVMTYVRETCGCCDCEKRCGALDVVFVIDSSESIGYTNFTLEKNFVINVVNRLGAIAKDP
KSETGTRVGVVQYSHDGTFEAIQLDDERIDSLSSFKEAVKNLEWIAGGTWTPSALKFAYN
QLIKESRRQKTRVFAVVITDGRHDPRDDDLNLRALCNHDVTVTAIGIGDMFHEKHESENL
YSIACDKPQQVRNMTLFSDLVAEKFIDDMEDVLCPDPQIVCPELPCQTELYVAQCTQRPV
DIVFLLDGSERLGEQNFHKVRRFVEEVSRRLTLARRDDDPLNARVALLQFGGPREQQVAF
PLTSNLSVIQEALASARYLNSFSHVGTGIVHAINQVVRSARAGARRHAELDFVFLTDGVT
GNDSLEEAVHSMRKQNVVPTVVAVGSDVDADVLSKISLGDPAAVFREKDYDSLAQPGFFD
RFIRWIC
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggcgcagggacgctgccaagatgctcccaggcccctgctccgctctcctgctc
tggggcctcctgggggccgtccacgctcagcagcaggaggtcatcagccctagcacctcc
gagaggaacagctgcccagagaaggccgactgcccgatccacgtgtacttcgtgctggac
acgtcggagagcatcaccatgcagtcccccaccgacagcctgctctaccacatgcagcag
ttcgtgctgcagttcatcagccagctgcaggacgagctctacctggaccaggtggccctg
agctggcgctacggcggcctgcacttctccgacctggtggaggtgttcagcccgcccggc
agcgaccgggcctccttcagcaagagcctgcagggcatcagctccttccgccgcggcacc
ttcaccgactgcatgctggccaacatgacccaggaggtccggcggcacgtgggcaagggg
gtgatcaacttcgcggtgatcatcaccgacggtcacgtcacgggcagcccgtgcgggggc
atcaagctgcaggcggagcgggcccgcgaggagggcatccggctcttcgcggtgccgccc
aacctgaagcttaacgagcagggcctgcgggacatcgccaacacgccgcacgagctctac
cggaacaactacgccaccatgcggcccgactccaccgagatcgacgaggacaccatcaac
cgcatcatcaaggtcatgaaacatgaagcctacggagagtgctacaaggtgagctgtctg
gagatccccgggccccccggccccaagggctaccgcggacagaagggcgccaagggcaac
atgggtgagcctggagagcctggacagaaggggcgacagggagatccaggcatcgaaggc
cccattggattcccaggacccaagggtgttcctggtttcaaaggagagaagggcgagttt
ggagccgaagggcggaagggcgcccccggcctggcaggcaagaacgggacagatggacag
aagggcaagttggggcgtatcggacctccgggctgcaagggagacgccggggatcggggc
ccggatggttacgtgggggaagccggcagccctggggagccaggagatcaaggctccaag
ggggaccctggccgccccggacgcagagggcccccgggggaaaacggggcaaaaggaagc
aagggctaccaaggcaacaccggagccccaggaagtcccggtctgaaaggagccaagggt
gggcctgggccccgaggccccaaaggcgagcccgggcgcaggggagaccctggaaccaag
ggcagcccaggcagcgatggccccaagggtgagaagggggaccctggccctgaggggccc
cggggcctggctggagaggttggcaacaaaggagccaagggagaccgaggtttacctgga
cccagaggtccccaggggactgttggagagcccgggaagcagggatctcggggagaccct
ggggatgctggcccccgcggagactcgggacagcctggccccaagggagaccccggcagg
cctggcttcagctacccgggaccccgaggagcacctggagagaaaggcgagcctggcccc
cccggccccgaggggggcagaggtgactttgggtccaaaggagaacccgggaggaaaggc
cagaagggcgagcctgcagatcctggaccccctggtgagccaggcccccgggggccgaga
ggagatccaggacccgagggagagcctggccccccaggagaccctggcctcacggagtgt
gacgtcatgacctacgtgagggagacgtgcgggtgctgtgactgtgagaagcgctgtggc
gctctggacgtggtgttcgtcatcgacagctccgagagcatcggctacaccaacttcacc
ctggagaagaacttcgtcatcaacgtggtcaacaggctgggggccatcgccaaggacccc
aagtcggagacggggacccgcgtgggcgtcgtgcagtacagccacgacggcaccttcgag
gccatccagctggacgacgagcgcatcgactcactgtccagcttcaaggaggccgtcaag
aaccttgagtggatcgcgggcggcacctggacgccctcggccctcaagttcgcctacaac
cagctcatcaaggagagccggcgccagaagacccgcgtgttcgcggtggtcatcacggac
ggccgccacgaccctcgcgacgacgacctcaacctgcgggcgctgtgcaaccacgatgtg
acggtgacggccatcggcatcggggacatgttccacgagaagcacgagagcgagaacctg
tactcgatcgcctgcgacaagccgcagcaggtgcgcaacatgacgcttttctccgacctg
gtggccgagaagttcatcgacgacatggaggacgtgctgtgcccggatccccagatcgtg
tgcccggaacttccctgccaaacagagctgtacgtggcccagtgcacccagcggcccgtg
gacatcgtcttcctgctggacggctccgagcggctgggcgagcagaacttccacaaggtg
cggcgcttcgtggaggaggtgtcccggcggctgaccctggcgcgcagggacgacgacccg
ctcaacgcgcgcgtggcgctgctgcagttcggaggcccgcgcgagcagcaggtggccttc
ccgctgacctccaacctgagcgtcatccaggaggcgctggcgagcgcccgctacctcaac
tccttctcgcacgtgggcacgggcatcgtgcacgccatcaaccaggtggtgcgcagcgcg
cgggctggggcgcgccgccacgccgagctggacttcgtgttcctcacggacggcgtcacg
ggcaacgacagcctggaggaggctgtgcattccatgcgcaagcagaacgtggtgcccacc
gtggtggccgtgggcagcgacgtggacgcggacgtgctctccaagatcagcctgggtgac
ccggccgccgtcttccgcgagaaggactacgacagcctggcccagcctggctttttcgac
aggttcatccgctggatctgctag
DBGET
integrated database retrieval system
