Lipotes vexillifer (Yangtze River dolphin): 103078668
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Entry
103078668 CDS
T03090
Symbol
SMG5
Name
(RefSeq) protein SMG5
KO
K11125
protein SMG5
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103078668 (SMG5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lve03019
]
103078668 (SMG5)
03032 DNA replication proteins [BR:
lve03032
]
103078668 (SMG5)
Messenger RNA biogenesis [BR:
lve03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
103078668 (SMG5)
mRNA cycle factors
Common to processing body (P body) and stress granule
103078668 (SMG5)
DNA replication proteins [BR:
lve03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
103078668 (SMG5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
PIN_4
Motif
Other DBs
NCBI-GeneID:
103078668
NCBI-ProteinID:
XP_007457959
UniProt:
A0A340XFF0
LinkDB
All DBs
Position
Unknown
AA seq
1016 aa
AA seq
DB search
MSQGPPTGESSEPEAKVLHTKRLYRAVVEAVHRLDLILCNKTAYQEVFKPENISLRNKLR
ELCIKLMFLHPVDYGRKAEELLWRKVYYEVIQLIKTNKKHIHSRSTLECAYRTHLVAGIG
FYQHLLLYIQSHYQLELQCCIDWTHVTDPLIGCKKPVSASGKEMDWAQMACHRCLVYLGD
LSRYQNELAGVDTELLAERFYYQALSVAPQIGMPFNQLGTLAGSKYYNVEAMYCYLRCIQ
SEVSFEGAYGNLKRLYDKAAKMYHQLKKCETRKLSPSKKRGKDIKRLLVNFMYLQSLLQP
KSSSVDSELTSLCQSVLEDFNLCLFYLPSSPNLSLASEDEEEYESGYAFLPDLLIFQMVI
ICLMGVHSLKRAGSKQYSAAIAFTLALFSHLVNHVNIRLQAELEEGENPVPAFQSDGTDE
PESKEPLEKVEEPGPEPPPAASQDGEVRKSRKFSRLSCLRRRRHPPKAGDDSDLSEGFDS
DSSHDSARASEGSDSGSDKSLEGGGTAFDAETDSEMNSQESRSDLEDMEDEEGTRSPALE
PPRARSEAPESLNGPLGPSEASIASNLQAMSTQMFQTKRCFRLAPTFSNLLLQPTTEAPT
LASRRPCVNGDVDKPSDPASEEGSESEGSESSGRSCRNERSIQEKLQVLMAEGLLPAVKV
FLDWLRTNPDLIIVCAQSSQSLWNRLSVLLNLLPAAGGLQESGLVLCPEVQDLLEGCELP
DLPSSLLLPEDMALRNLPPLRAAHRRFNFDTDRLLLSTSEETVVRICCIRSFGHFIARLQ
GSILQFNPEVGIFVSIVQSEQESLLQQAQAQFRMAQEEARRNRLMRDMAQLRLQLEVSQL
EGSLQQPKAQSAMSPYLVPDTQALCHHLPVIRQLATSGRFIVIIPRTVIDGLDLLKKEHP
GARDGIRYLEAEFKKGNRYIRCQKEVGKSFERHKLKRQDADAWTLYKILDSCKQLTLAQG
AGEEDPSGMVTIITGLPLDNPSTLSGPMQAALQAAAHASVDIKNVLDFYKQWKEIG
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaggcccccccacaggggagagcagcgagcccgaagcaaaggtcctccacact
aagcggctttaccgggccgtggtggaggctgtgcatcgacttgacctcatcctttgcaac
aaaaccgcttatcaagaagtgttcaaaccagagaacattagcctgaggaacaagctgcgt
gagctctgcatcaagcttatgttcctgcacccggtggactatgggaggaaggcagaggag
ctgctgtggagaaaggtgtactacgaagttatccagcttatcaagactaacaaaaagcat
atccacagccggagcaccttggaatgtgcctacaggacacacctggtcgctggtattggc
ttctatcagcatctccttctttatattcagtcccactaccagctagaactgcagtgctgc
atcgactggacccatgtcaccgaccccctcataggatgcaagaagccagtgtctgcctca
gggaaggagatggattgggcacagatggcatgccaccgatgtctagtgtacctgggggat
ttgtcacgatatcagaatgaattagctggcgtagacactgagctgctagctgagagattt
tactaccaagccctgtcagtggctccccagattggaatgcccttcaaccagctgggcacc
cttgccggcagcaagtactataacgtggaagccatgtattgctacctgcgctgcatccag
tcggaagtgtcctttgagggggcctatgggaacctcaagcggctgtatgacaaggcagcc
aaaatgtaccaccagctgaagaagtgcgagacgcggaagctctctcccagcaagaagcga
ggtaaagacattaagaggttgctggtgaactttatgtatctgcaaagcctcctgcagccc
aaaagcagctctgtggactcagagctgacatcactttgccagtcagtcctggaggacttc
aacctctgtctcttctacctgccctcctcacccaacctcagcctggccagtgaggatgag
gaggagtatgagagtggatatgctttcctcccggaccttctcatctttcaaatggtcatc
atctgccttatgggtgtgcacagcttgaagagagcaggatccaagcagtacagtgcagcc
attgccttcaccctggccctcttctcccaccttgtcaatcatgtcaacatacggctgcaa
gctgagctggaagagggcgagaatcccgtcccggcattccagagtgatggcacagatgaa
ccagagtccaaggaacccttggagaaggtggaggagccaggtcctgagcctcctcctgca
gcatctcaagatggcgaggtcagaaaaagccggaagttctcccgcctctcctgcctccgc
cgccggcgccacccacccaaagctggtgatgacagtgacctgagtgaaggctttgactcc
gactcgagccatgactcagcccgggccagtgagggctcagacagtggctccgacaagagc
cttgaaggtgggggaacagcctttgatgccgagacagattcagaaatgaacagccaagag
tcccgatcagacctggaagatatggaggacgaggaagggacacggtccccagccctggag
ccacctcgggccaggtcagaggctcctgaatccctcaacggcccactgggccccagtgag
gccagcatcgccagcaatctacaagccatgtccacccagatgttccagactaaacgctgc
ttccgactggcccccaccttcagcaacctgctcctccagcccaccaccgaagctcccacc
ttggccagccgcaggccctgtgtcaatggggatgtggacaagccctcagacccagcctct
gaagagggctctgagtcggagggaagtgagtctagtgggcgctcctgtcggaatgagcgc
agcatccaggagaagctgcaagtcctgatggccgaaggcctgcttcctgctgtgaaagtc
ttcctggactggctacggactaaccccgacctcatcattgtgtgtgcgcagagctctcaa
agtctgtggaaccgcctctctgtgttgcttaatctgttgccagctgctgggggactccaa
gagtctggcctggtcctgtgtcctgaggtccaggatcttcttgaaggttgtgaactgcct
gacctcccgtctagcttgctgctcccagaggacatggcacttcgcaacctgcctcccctc
cgggctgcccacagacgctttaactttgacacggatcggctcttgctcagcacctcagag
gagacggtcgtgcgcatctgctgcatccgcagctttggccacttcattgcccgcctgcaa
ggcagcatcctgcagttcaacccagaggttggcatcttcgtcagcatcgtccagtctgag
caggagagcctgctgcagcaggcccaggcccagtttcgcatggcacaggaggaagctcgg
cggaacaggctaatgagagacatggcccagctacgacttcagctcgaggtctctcagctg
gaagggagcctgcagcagcccaaggcccagtcagcaatgtctccctacctcgtccccgac
acccaagccctttgccaccacctccctgtcatccgccagctggccaccagtggccgcttc
attgtcatcatcccaaggacagtgatcgatggcctggatttgctgaagaaggaacacccc
ggggcccgggatgggatccgatacctggaggcagagtttaaaaaagggaacaggtacatt
cgctgccagaaagaggtggggaagagctttgagcggcataagctgaagaggcaggatgca
gatgcctggacgctctataagatactggacagctgcaaacagctgactctggcccagggg
gcaggtgaggaggacccgagtggcatggtgaccatcatcacaggccttccactggacaac
cccagcacgctctcaggccctatgcaggcagccttgcaggccgctgcacatgccagtgtg
gacatcaagaatgttctggacttctacaagcagtggaaggagattggttga
DBGET
integrated database retrieval system
