Lipotes vexillifer (Yangtze River dolphin): 103079371
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Entry
103079371 CDS
T03090
Symbol
TRUB1
Name
(RefSeq) probable tRNA pseudouridine synthase 1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lve03016
]
103079371 (TRUB1)
Enzymes [BR:
lve01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
103079371 (TRUB1)
Transfer RNA biogenesis [BR:
lve03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
103079371 (TRUB1)
Prokaryotic type
103079371 (TRUB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
Motif
Other DBs
NCBI-GeneID:
103079371
NCBI-ProteinID:
XP_007469669
UniProt:
A0A340YCN6
LinkDB
All DBs
Position
Unknown
AA seq
348 aa
AA seq
DB search
MAAAEAAVVSSSSLKPDTAPVPESAEMAAATAATSSAMAAAAAIAARTGSEARVSKPALA
TKLLSLSGVFAVHKPKGPTSAELLNRLKEKLLAEAGMPSPEWTKRKKQTLKIGHGGTLDS
AARGVLVVGIGRGTKLLTSMLSGSKRYIATGELGKATDTLDSTGKVTEEKPYDKITQEDI
EGILQKFTGNIMQVPPLYSALKKDGQRLSTLMKRGEVVEAKPARPVTVYSLSLQKFQPPF
FTLDVECGGGFYIRSLVSDIGKELSSCANVLELTRTKQGPFTLEEHALPEDKWTIDDIAQ
SLEQCSSLLPAETALKKSKPEESNEQVLSCEYITLNEIKGEDDVIKTF
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgctgaggcggcggtggtatcatcgtcatccttgaaaccagacacagcccca
gtccccgaaagtgcagaaatggctgcagccacggccgccacatcctcagcgatggctgca
gccgcggcgattgcggccaggaccggatccgaagccagggtctccaagcccgcgttggct
actaagctgctgtccctgagcggcgtgttcgccgtgcacaagcccaaagggcccacttca
gccgagctgctgaatcggctgaaggagaagctgctggcagaagctggaatgccttctcca
gaatggaccaagaggaaaaagcagactttgaaaattgggcatggagggactctagacagt
gcagcccgaggagtcctggtggttggaattggaaggggaacaaaactgttgaccagtatg
ttgtcagggtccaagaggtatattgccactggcgaactggggaaagccactgacacgcta
gattctacagggaaagtaacagaagaaaaaccttacgataaaataacacaggaagatatt
gaaggcattctacagaaatttactgggaatataatgcaagtacctcctctctattctgca
ttaaagaaagatggacagagactttcaactttgatgaagagaggtgaagtcgtggaagca
aaacctgccaggccagttaccgtgtacagtctttcccttcaaaaattccagccaccattt
ttcacattagatgttgaatgtggaggaggtttttatatcagaagcttggtcagtgacatt
ggcaaagaactgtcttcctgtgccaatgtgctagagctgacccgcaccaaacagggaccc
tttacactggaggagcacgcccttcctgaagacaaatggacaattgatgacattgcacag
tctcttgagcagtgctcatcccttctcccagcggagacggcacttaaaaaatcaaaacct
gaggagtctaatgagcaagttttgagctgtgagtatataactctaaatgagataaaggga
gaagatgatgtgattaagacattttaa
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