Lipotes vexillifer (Yangtze River dolphin): 103080032
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Entry
103080032 CDS
T03090
Symbol
HERC4
Name
(RefSeq) LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase HERC4
KO
K10615
E3 ubiquitin-protein ligase HERC4 [EC:
2.3.2.26
]
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
103080032 (HERC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lve04121
]
103080032 (HERC4)
Enzymes [BR:
lve01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
103080032 (HERC4)
Ubiquitin system [BR:
lve04121
]
Ubiquitin ligases (E3)
HECT type E3
103080032 (HERC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
103080032
NCBI-ProteinID:
XP_007456534
UniProt:
A0A340XBH9
LinkDB
All DBs
Position
Unknown
AA seq
1058 aa
AA seq
DB search
MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC
NDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG
SEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQAS
PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR
TQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIA
CGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWFPYNGQCPPDFDSEE
YFCVKRIFSGGDQSFSHYSNPQNCGPPDDFRYPDPSKQIWTVNEALIQKWLSYPSGRFPV
EIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGTRFSGVDMNAARLLFHKLIQSDHPQISQ
QVAASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTALVNLEKAP
LKVLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIXXXXFXKIFNSFLHTALKVLEI
LHRVNEKTGQIIQYDKFYIHEVQELIDIRNDYINWVQQQAYGMDVNHGLTELADIPVTIC
TYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLPVIESVNPCLILVVRRENIV
GDAMEVLRKTKNIDYKKPLKVIFVGEDAVDAGGVRKEFFLLIMRELLDPKYGMFRYYEDS
RLIWFSDKTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKKLLKKKPSLDDLKELMP
DVGRSMQQLLDYPEDDVEETFCLNFTITVENFGATEVKELVLNGADTAVNKQNRQEFVDA
YVDYIFNKSVASLFDAFHAGFHKVCGGKVLQLFQPNELQAMVIGNTNYDWKELEKNTEYK
GEYWAEHPTIKMFWEVFHELPLEKKKQFLLFLTGSDRIPILGMKSLILVIQSTGGGEEYL
PVSHTCFNLLDLPKYTDKETLRSKLIQAIDHNEGFSLI
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atgttgtgctggggaaatgcatcttttggacagctaggtttgggtggaattgatgaagaa
attgtactagagcccagaaaaagtgacttttttataaataaaaaggttcgagatgtagga
tgtggactcagacatactgtatttgttctggatgatggaacagtatacacatgtggatgt
aatgatctagggcagctaggtcatgaaaaatcgagaaagaaaccagagcaggttgttgcg
ctggatgctcaaaatatcgttgctgtttcatgtggagaagctcatacattagcactaaac
gacaagggccaggtgtatgcttggggtcttgattctgatggacaacttggcctgctagga
tcagaggaatgtatcagagtacccagaaatattaaaagtttgtcggatatccagatagta
caggttgcttgtggctactatcattcacttgcactttctaaagcaagtgaagtcttctgt
tggggacagaataaatatggccagttgggtttaggcattgactgtaaaaagcaagcttca
ccacaactgattaagtctttacttggaatccctttcatgcaagttgcagcaggaggagcc
catagttttgtactcaccctttctggagctatctttggatggggacgcaacaaatttggt
cagctaggtcttaatgatgaaaatgataggtatgttcctaatttactaaagtcactaaga
actcagaaaatagtttatatttgttgtggagaagatcatactgctgcactaaccaaggaa
ggtggagtgtttacttttggagctggagggtatggtcagttgggtcataactctaccagt
catgaaataaacccaaggaaagtttttgaacttatgggaagcattgtcactcagattgct
tgtggaaggcagcacacttctgcttttgtcccttcatcaggacgaatttattcttttgga
cttggtggtaatggacagctaggaactggttcaacaagcaacagaaaaagtcctttcact
gtgaaaggaaattggttcccttataatggacaatgtccaccagattttgattctgaagaa
tatttctgtgtaaaaagaattttctcaggtggagatcaaagcttttcacattactctaat
ccccagaactgtgggccaccagatgactttagatatcctgatccttcgaagcagatctgg
actgtgaatgaagctctaattcaaaaatggctgagctacccctctggaagatttcctgta
gagatagccaatgaaatagatggaacgttttcttcgtctggttgtctaaatggaagtttt
ttagctgttagcaatgatgatcactatagaacgggcaccagattttcaggggttgatatg
aatgctgctaggcttttattccacaaacttatacaatctgatcatcctcagatatctcag
caggtggcagctagcttggaaaagaatcttattcctaaactgactagctccttacctgat
gttgaagcattgagattttatcttactctaccagaatgtcccctgatgagtgattccaac
aatttcaccacaatagcaattccctttggtacagctcttgtgaacctagaaaaggcacca
ctgaaagtacttgaaaactggtggtcagtacttgaacctccactattcctcaagattgta
gaactttttaaggaggttgtggtacatcttttgaaactctacaagatcggcattnnnnnn
nnnnccttctgaaaaattttcaacagttttcttcataccgcattaaaggttttagaaata
ttacatagggtaaatgagaaaactggacagattatacaatatgataaattttatatacat
gaagtacaagaattgatagacatacggaatgattatatcaactgggtccaacagcaggcc
tatggaatggatgtcaaccatggattaactgagttggcagatatccctgttacaatctgc
acatatccatttgtatttgatgcccaagcaaaaactactctgttacaaacagatgcagtc
ttacagatgcagatggctattgaccaggcccacagacagaatgtctcctctctttttctc
ccagtgattgaatctgtgaatccttgcttaattctagtggtacgtagagaaaatatagta
ggagatgcaatggaagtccttaggaaaacaaagaatatagactacaaaaagccactcaag
gttatatttgttggagaagatgctgttgatgcaggaggggtacgcaaagaatttttcttg
ctcatcatgagggaattattggatcctaaatatggcatgtttaggtattatgaagattcc
aggctcatttggttttctgataagacatttgaagacagtgatttgttccacttgattggt
gttatctgtggattagcaatttataattttactattgtggacctccattttcctttggct
ttgtataagaaactgctaaaaaagaagccatctctggatgatttgaaagaactaatgcct
gatgttgggagaagcatgcaacagttactggattatccagaagatgatgttgaggaaaca
ttttgtcttaattttacgatcacagttgaaaactttggtgcaacagaagtgaaagaactg
gttctaaatggtgcagacacagctgttaacaaacaaaatcggcaggagtttgttgatgct
tatgtggattacatattcaataaatcggtggcttccttatttgatgcttttcatgcgggc
tttcataaggtctgtggaggaaaagtccttcagctcttccagcctaatgaactacaagca
atggttattggaaatacaaattatgactggaaggaactggaaaagaatacagaatacaaa
ggagaatattgggcagaacatcctacaataaaaatgttttgggaagtatttcacgaatta
ccattggaaaagaaaaagcaatttttgttatttttgacaggtagtgatcgcattcctatt
cttggtatgaagagtctaatactagtcatccagtcaacaggaggtggtgaggaatatctc
ccagtttcccatacctgttttaatcttctggatcttccaaaatacacggacaaagaaact
ctacgctctaaactgatccaagctattgaccacaatgaaggcttcagtttaatataa
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