Lipotes vexillifer (Yangtze River dolphin): 103080065
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Entry
103080065 CDS
T03090
Symbol
SHANK2
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 2
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
103080065 (SHANK2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
SAM_1
SAM_2
Ank_3
Ank_4
Ank_5
SH3_2
PDZ_6
SH3_9
PDZ
FERM_f0
SH3_1
SAM_4
SAM_CEP-1_C
Motif
Other DBs
NCBI-GeneID:
103080065
NCBI-ProteinID:
XP_007466075
UniProt:
A0A340Y3K1
LinkDB
All DBs
Position
Unknown
AA seq
1817 aa
AA seq
DB search
MPRSPTSSEDEMAQSFSYSSDESDSDSSKEETIYDTIRATAEKPGGARTEESQGNTLVLR
IVIEDLQQTKCIRFNPDATVWVAKQRILCSLNQSLKDVLNYGLFQPASDGRDGKFLDEER
LLRAYPQPAGRGIPSLEFRYKKRVYRQSNLDEKQLAKLHTKTNLKKCMDYIQHRSVEKVV
KMLERGLDPNFHDLETGETPLTLAAQLDDPVEVIKALRNGGAHLDFRAKDGMTALHKAAR
ARSLLALKTLLELGASPDYKDSYGLTPLYHTAVVGGDPCCCELLLHEHAAVSCKDENGWH
EIHQACRYGHVQHLEHLLFYGADMGAQNASGNTALHICALYNQDSCARVLLFRGGDKELK
NYNSQTPFQVAIIAGNFELAEYIKNHKETDIVPFREAPAYSNRRRRPPSTLAAPRVLLRS
NSDNNLNASAPDWAVHSAGPHRSLSPQLPQQMLSKPDGAVKTLGSYTSGPRSRSPSLNRL
GGTGEDGKRPWQPWHVGPAFLPGANKDALSAFEYPGPKRKLYSAVPGRLFVVVKPYQPQV
DGEIPLHRGDRVKVLSIGEGGFWEGSARGHIGWFPAECVEEVQCKPKDSQAETRADRSKK
LFRHYTVGSYDSFDASSDCIIEEKTVVLQKKDNEGFGFVLRGAKADTPIEEFTPTPAFPA
LQYLESVDEGGVAWQAGLRTGDFLIEVNNENVVKVGHRQVVNMIRQGGNHLVLKVVTVTR
NLDPDDTARKKAPPPPKRAPTTALTLRSKSMTSELEELVDKASVRKKKDKPDEIVPASKP
SRTAESVAVESRVATIKQRPTSRCFPSVSDVNSVYERQGIAVMTPTVPGSPKGPFLGLPR
GTMRRQKSIDSRIFLSAPPQSVPPSPPPPSPTAYNCPKSPTPRVYGTIKPAFNQNSAAKV
TPAARSDTVATMMREKGLYHRRELDRYSLDSEDLYSRNAAAQAAFRGKRGQMPENPYSEV
GKVASKAVYVPAKPARRKGVLVKQPNVEDSPEKTCSIPIPTIIVKEPSTSSSGRSSQGSS
TEVEPQASEQPGQLRPDDSPAASSPFAAAIAGAVRDREKRLEARRNSPAFLSTDLGDEDV
GLGPPAPQARPSKFPEEGGFGEEDGTEQLSSPTPGAATGEPENHFVGGGEAGAQGEAGRP
LNSTSKAKGPESSPAAPLKSSSAAGPENYVHPLTGRLLDPSSPLALALSARDRALKESQQ
GPKGEAPKADLNKPLYIDTKMRPSGEAGFPPVTRQNTRGPLRRQETENKYEADLGKERKG
DEKGTLTNVADASQRKSAGLLMVHTVDVARPDAFLQEEDEDADAETKPDRSPSEVPEGVP
ETEGALPIPAGPEPAAAAPGRTVVAAGSVEEAVILPFRIPPPPLASVDLDEDFIFTEPLP
PPLEFANSFDIPDDRVASVPALSDLVKQKKNDAPQCPSLNSSQPTNSADSEKPAGLSNCL
PASFLPPPESFDAVTDSGIEEADSRSSSDHHLETTSTISTVSSISTLSSEGGESVDTCTV
YADGQAFTADKPPVPPKPKMKPVIHKGNALYHDALLEEDADSFVIPLPARPPPPGAAQPG
TTKVIQPRTSRLWGDISEVKSPILSGPKANVISELNSILQQMNREKTAKPGEGLDSPAGS
KPASLAPRGPEVMSTVSGTRSTTVTFTVRPGTSQPITLQSRPPDYESRTSGPRRAPSPVV
SPTELNKEILPAPLSAAAAAPSPTLSDVFGLPSQPPPGDLFGLNPAGRSRSPSPSILQQP
ISNKPFTTKPVHLWTKPDVADWLESLNLGEHKEAFMDNEIDGSHLPNLQKEDLIDLGVTR
VGHRMNIERALKQLLDR
NT seq
5454 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgcagcccgacgtccagcgaggacgagatggcccagagcttctcctactcttcg
gacgaatcggactcggacagctccaaggaagagaccatttacgacaccatccgggccaca
gcagaaaagccgggcggcgccaggacagaggagagccagggcaacacgctggtgctgcga
atcgtcatcgaggacctgcagcagacgaaatgcattcgatttaacccagatgcgacagtg
tgggttgcaaagcagcggattctgtgctcgttgaaccagagcctgaaggacgtcctgaac
tacgggctgttccagccggcgagcgacgggcgcgacggcaagttcttggatgaggagcgg
cttctgcgcgcgtacccgcagcccgcgggcaggggcatcccctccctggagtttcgctac
aagaagcgggtgtatagacaatccaatctggatgagaaacagttggccaagctgcacaca
aagaccaacctgaaaaaatgcatggattacatccagcatcgttcggtggaaaaggttgtc
aagatgctggaacgaggcctggatccgaatttccatgacctggagaccggagagactccc
ctgaccttagccgcgcagctggacgaccccgtggaggtgatcaaagctctccgaaacggc
ggggcccacctggacttccgcgccaaagacgggatgacggccctgcacaaagccgcccgc
gccaggagcctgctggccctgaagaccctgttggagcttggagcatccccggattataag
gacagctacggtctcacgccgctgtatcacactgcggtggtcgggggcgacccctgctgc
tgcgagctgctgctgcacgagcacgcggccgtgagctgcaaggacgagaacggctggcac
gagatccaccaggcctgcaggtacggacacgtgcagcacctggagcacctgctcttctat
ggggctgacatgggggcccagaacgcctcggggaacactgccctgcacatctgcgccctc
tacaaccaggacagctgtgcacgcgtgctgctgtttcggggtggagataaggaattgaag
aactacaacagccagaccccattccaggtggcgatcatagctggtaacttcgagctggct
gagtacatcaagaaccacaaggaaaccgacatcgtgcccttccgagaggccccggcgtac
tccaaccgaaggcgacggccccccagcacactggccgccccccgggttctgctgcgttcc
aacagcgacaacaacctcaatgccagcgcgcctgactgggccgtccactcggccggcccc
caccgcagcctctcgccccagctgccgcagcagatgctcagcaagcccgacggggccgtg
aagacccttgggagctacacctccggaccccgcagccgatccccctcgctcaacaggctg
ggcggcaccggcgaggatggcaagaggccctggcagccctggcacgtcggtccggctttc
ctgccaggcgccaacaaggatgcgctctcggccttcgagtacccggggcccaagaggaag
ctgtacagcgcggtccccgggaggctcttcgttgtcgtcaagccctaccagccccaggtc
gatggtgagatcccccttcaccgtggcgacagggtcaaagttctgagcatcggcgaaggg
ggcttctgggaaggcagcgcccgcggccacatcggatggttcccagccgagtgtgtggag
gaggtccagtgcaagcccaaggacagccaggcagaaactcgtgcagaccgcagcaagaaa
ctcttccgccactacacggtcggctcttatgacagctttgatgcttccagtgactgcatc
atcgaggagaagaccgtggtcctacagaagaaagacaatgagggtttcggatttgtgctc
cgcggggcgaaagcggatacgcccatcgaagagttcacgccaacgccagcgttcccagcc
ctgcagtacctggagtccgtggatgaaggtggggtggcatggcaagccggactgaggact
ggggacttcttgattgaggttaacaacgagaatgtcgtgaaggtcggccaccggcaggtg
gtgaacatgatccgccagggagggaatcacctcgtcctcaaggtggtcacagtgaccagg
aatctcgacccagacgacacggccaggaagaaagctcctccgcccccgaagcgcgccccg
accacggccctcacgctgcgctccaagtccatgacctcggagctggaggagctcgtggat
aaagcctccgtccggaagaagaaggataaacccgatgagatagtcccagcctccaagcca
tcccgaactgctgagagcgtggcagtggagtccagggtggccaccatcaagcagcggccc
accagccggtgcttcccctctgtctcggacgtgaactccgtgtacgaacgccaggggatc
gccgtgatgacgcccaccgttcctgggagcccgaaaggcccgttcctgggcctccctcga
ggtacgatgcgaaggcaaaaatcaatagacagcagaatctttctatcagccccgccacag
tcggtgcccccctctcctcccccaccctcccccactgcctacaactgccccaagtcccca
actcccagagtctacgggacgatcaagcccgcgttcaatcagaactccgccgccaaggtg
accccggcagctcgctccgacacggtggccaccatgatgagggagaaggggctgtaccac
aggagggagctggaccgctactccctggactccgaggacctctacagccgcaacgccgcc
gcccaggccgccttccgcggcaagagggggcagatgcccgaaaacccgtactccgaggtg
gggaaggtggccagcaaagccgtctacgtccccgccaagcccgccaggcggaagggcgtg
ctggtaaagcagcccaacgtggaggacagccccgagaagacgtgctccatccccatcccg
accatcatcgtcaaggagccctccaccagcagcagcggcaggagcagccagggcagcagc
acggaggtcgagccccaggcctccgagcagccgggccagctgcggcccgacgacagcccg
gccgccagcagccccttcgccgccgccatcgccggcgccgtccgcgaccgggagaagcgg
ctggaggccaggaggaactcgccggccttcctgtccacggacctgggggacgaggacgtg
ggcctggggccgcccgccccccaggcacggccctccaagttccccgaggagggcgggttc
ggcgaggaggacggcaccgagcagctgtcgtcacccacgccaggggcggcgaccggggag
cccgagaaccactttgtgggtggtggcgaggccggagctcagggtgaggccggcaggcca
ctgaattccacgtccaaagccaaggggcccgagagcagccctgcagctcccctcaagagc
agcagtgcggccggccccgagaattacgtccacccgctcacggggaggctgctggacccg
agctccccgctggccctggcgctctctgcgagggaccgagccttgaaggagtcccagcag
ggccccaagggggaggcccccaaggccgacctcaacaaacctctctacatcgataccaaa
atgcggcccagcggggaagcaggcttccctccggtcaccaggcagaacacgcgggggccc
ctgaggcggcaggagacggaaaacaagtacgaggccgacctgggcaaggagcggaagggc
gacgagaagggcacgctcaccaacgtcgcggatgcgtcccagcggaagtcggccggcctg
ctgatggtacacaccgtggacgtggccaggccggacgccttcctgcaggaagaggacgag
gatgccgacgcggaaacgaagccggaccgctcgccgtccgaggtgccagaaggcgttccc
gaaactgaaggtgctttaccgatccccgctggccccgagcccgcggccgccgcgcccggc
aggaccgtcgtggcggcgggctccgtggaggaggcggtgatcttgccgttccgcatccct
cccccacctctggcgtccgtggatctggatgaggattttatttttacagagccactgcct
cctcccctggaatttgcaaacagttttgatatccccgatgaccgcgttgcttctgtccct
gcactctcggacctggtcaagcagaagaaaaacgacgccccccagtgcccttcgttgaac
tccagccagcccaccaactctgcggacagtgagaagccagctggcctttcgaactgtctg
cccgcctcattcctgccaccccccgaaagctttgacgccgtcacggactctgggatcgag
gaggcggacagccggagcagcagcgaccaccacctcgagacgaccagcaccatctccacg
gtctccagcatctccaccctgtcctccgagggcggggagagcgtggacacctgcaccgtc
tatgcagatgggcaggcgtttacggccgacaagcccccagtacctccgaagccaaaaatg
aagcccgtgattcacaaaggcaacgcgctttaccacgacgcgctgctggaggaggacgcg
gacagctttgtgatccccctgccggcacgcccgccgccccccggcgcggcccagcccggg
accacgaaggttatccagccgaggacctccaggctgtggggtgacatctcggaggtcaaa
agcccgattctctctggcccaaaggcgaacgtgattagtgagttgaactcaatcctgcag
caaatgaaccgagagaaaacggcaaagccgggggaaggactggactcgccagcgggatcc
aagcctgccagcctcgctccaagaggcccagaggtcatgagcaccgtctcaggtacgcgg
agcacgacggtcaccttcacggttcgccctgggacctcccagcccatcaccctgcagagc
cggcccccagactatgagagcaggacctcaggaccaagacgtgcccccagccccgtggtc
tcgcccacagagctgaacaaagagatcctgcctgcgcccctgtccgctgccgccgcggct
ccctctcccaccctctcggatgtcttcggcctcccaagccagccccctcccggggacctg
tttggcttgaacccagcgggacgcagcaggtcgccatccccctccatactgcaacagcca
atctccaataagccttttacaactaaacctgtccacctgtggactaaaccagacgtggcg
gactggctggaaagcctcaacctgggtgagcataaagaggccttcatggacaacgagatc
gacggcagccacctgccaaacctccagaaggaagacctcatagatctgggcgtgacgcga
gtcgggcacagaatgaacatagaaagggctttgaagcagctgctggacagataa
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integrated database retrieval system
