Lipotes vexillifer (Yangtze River dolphin): 103080118
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Entry
103080118 CDS
T03090
Symbol
SMC4
Name
(RefSeq) structural maintenance of chromosomes protein 4 isoform X1
KO
K06675
structural maintenance of chromosome 4
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lve03036
]
103080118 (SMC4)
Chromosome and associated proteins [BR:
lve03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
103080118 (SMC4)
Condensin II
103080118 (SMC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_29
Bacillus_HBL
Mce4_CUP1
ATG17_like
ABC_tran
Motif
Other DBs
NCBI-GeneID:
103080118
NCBI-ProteinID:
XP_007454195
UniProt:
A0A340X533
LinkDB
All DBs
Position
Unknown
AA seq
1288 aa
AA seq
DB search
MPRKGTQPSTARRREEGPPQSPDGASSDAEPEPPPGRAGSLAPATAETPSEEIDNRSLEE
ILNSIPPPPPPAMTNEAGAPRLMITHIVNQNFKSYAGEKILGPFHKRFSCIIGPNGSGKS
NVIDSMLFVFGYRAQKIRSKKLSVLIHNSDEHKDIQSCTVEVHFQKIIDKEGDDYEVVPN
SNFYVSRTAYRDNTSVYHISGKKKTFKDVGNLLRSHGIDLDHNRFLILQGEVEQIAMMKP
KGQTEHDEGMLEYLEDIIGCGRLNEPIKVLCRRFEILNEHRGEKLNRVKMVEKEKDALEG
EKNIAIEFLTLENEIFRKKNHVCQYYIYDLQKRIAEMETQKEKIHEDTKEINEKSNILSN
EMKAKNKDVKDVEKKLNKITKFIEENKEKFTKLDLEDVQVREKLKHATSKARKLEKQLQK
DKEKIEEFKSIPAKSENIITETTTRNNALEKEKEKEEEKLKEVMDSLKQETQGLQKEKES
REKELMDFSKSVNEARSRMDVAQSELDIYLSRHNTAVSQLRRANEALMAASETLKERKAA
IGDIQAKLPQTERELKEKEKQLQKLTQEEINFKSLVHDLFQKVEEAKSSLAMNRSRGKVL
DAIIQEKISGRIPGIYGRLGDLGAIDEKYDIAISSCCHALDYIVVDSIDTAQECVNFLKR
QNIGVATFIGLDKMAVWAKKMTKIQTPENTPRLFDLVKVKDEEIRQAFYFALRDTLVADN
LDQATRVAYQKDRRWRVVTLQGQIIEQSGTMTGGGSKVMKGRMGSSVVVEISEEEVNKME
SQLQRDSQKAVQIQEQKVQLEEAVVKLRHSEREMRNTLEKFTASIQRLSEQEEYLNVQVK
ELEANVLATAPDQKKQKLLEENVTAFKTEYNNVAERAGKVEAEVKRLHNIIVEINNHKLK
AQQDKLDKINKQLDECASAITKAQVAIKTADRNLKKAQDSVFRTEKEIKDTEKEVDDLTA
ELKSLEDKAAEVVKNANAAEESLPEIQKEHRNLLQELKVIQENEHALQKDALSIKLKLEQ
VDGHIGEHNSKIKYWQKEISKISLHPIEDNPVEEIPLLSPEYLEAIKNPDSITNQIALLE
AQCHEMKPNLGAIAEYKKKEELYLQRVAELDKITYERDNFRQAYEDLRKQRLNEFMAGFY
IITNKLKENYQMLTLGGDAELELVDSLDPFSEGIMFSVRPPKKSWKKIFNLSGGEKTLSS
LALVFALHHYKPTPLYFMDEIDAALDFKNVSIVAFYIYEQTKNAQFIIISLRNNMFEISD
RLIGIYKTYNITKSVAVNPKEIASKGLC
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atgccccgtaaaggcacccagccctccaccgcccggcgcagagaggaagggccgccgcag
tccccggacggcgccagcagcgacgcggagcccgagccgccgcccggccgcgcggggagc
ctcgcgcctgccaccgcagagactccaagtgaggaaatagataatagaagtttagaagag
attttgaatagcatccctcctcccccacctccagcaatgaccaatgaagctggagctcct
cgtcttatgataactcatattgtaaaccagaacttcaaatcctatgctggggaaaaaatt
ctgggacctttccataagcgcttttcctgtattattgggccaaatggcagtggcaaatcc
aatgttattgattctatgctttttgtgtttggctatcgagcacaaaaaataagatctaaa
aaactctcagttctaatacacaattctgatgaacacaaggatattcagagttgtactgta
gaagttcactttcaaaagataattgataaggaaggggatgattatgaagtagttcctaac
agtaacttttatgtatccagaacggcctacagagataatacttctgtttatcacataagt
gggaagaagaaaacatttaaggatgttggaaatcttcttcgaagccatggaattgacttg
gaccataatagatttttaatcttacagggtgaagttgaacaaattgctatgatgaaacca
aaaggccagactgaacatgatgagggtatgcttgaatatttagaagatataattggttgt
ggacggctaaatgaacctattaaagtcttgtgtcggagatttgaaatattaaatgaacac
agaggagagaagttaaacagagttaagatggtggaaaaggaaaaggacgccttagaagga
gagaaaaacatagccattgaatttcttaccttggaaaatgaaatatttagaaaaaagaat
catgtttgtcaatattacatttatgatctgcagaaacgaattgctgaaatggagactcaa
aaggaaaaaattcatgaagataccaaagaaattaatgagaagagcaatatactgtcaaac
gaaatgaaagctaagaataaagatgtaaaagatgtagagaagaagctgaacaaaattaca
aaatttattgaggagaacaaagaaaaatttacaaaactagatttagaagatgttcaagtt
agggaaaaattaaagcatgctacaagtaaagccagaaaactggaaaaacaacttcaaaaa
gataaagaaaagattgaagaatttaaaagtatacctgccaagagtgagaatatcataact
gagacaacaactagaaacaatgcccttgagaaagaaaaagaaaaagaagaagaaaaatta
aaggaagttatggatagccttaaacaggaaacacaagggcttcagaaggaaaaagaaagt
cgagagaaagaacttatggatttcagcaaatcagtaaatgaagcacgttcaaggatggat
gtagcccaatcagaacttgatatctatcttagtcgtcataataccgcagtgtctcaatta
agaagggccaatgaagctctaatggcagcttctgagactctcaaagaaaggaaagctgca
attggagatatacaggcaaaactccctcaaactgaacgtgaactaaaggagaaagaaaaa
caacttcaaaaacttacacaagaagaaataaatttcaaaagtttggttcatgatcttttc
caaaaagtcgaagaagcgaagagttccttagcaatgaatcgaagtagggggaaagtcctt
gatgcaataattcaagaaaaaatatctggcagaattccaggaatatatggaagattgggg
gacttaggagcaattgatgaaaaatacgatattgctatttcatcctgttgtcatgcatta
gactacattgttgttgattctatcgatacggcccaagaatgtgtaaacttccttaaaaga
caaaatattggagttgcaacctttataggtttggataagatggcagtgtgggcaaagaaa
atgaccaaaattcaaactcctgaaaatactcctcgattatttgatttagtaaaagtaaaa
gatgaggaaattcgccaagctttttactttgccttacgggataccttagtagctgacaac
ttagatcaagccacaagagtagcatatcagaaagatagaagatggagagtggtaacatta
caggggcaaatcatagaacagtcaggtacaatgactggtggtggaagcaaagtaatgaaa
ggaaggatgggttcatcagttgttgttgaaatctcagaagaagaggtaaataaaatggaa
tcacagttgcagagagactctcaaaaagcagtgcaaattcaggaacagaaagtacaactg
gaagaagcagtagttaagttaaggcatagtgaacgagaaatgaggaatacactagaaaag
tttactgcaagcatccagcgtttatcagagcaagaagaatatttgaatgtccaagttaag
gaacttgaagctaatgtacttgctacagcccctgaccaaaaaaagcagaaattgctagaa
gaaaatgttactgctttcaagacagagtataacaatgtggctgagagagctggtaaagtg
gaagctgaggttaaaaggttacacaatattatcgtagaaatcaataaccataaactcaag
gcccaacaagacaaacttgataaaataaacaaacaattagatgaatgtgcttctgctatt
actaaagcccaagtagcaatcaagactgctgacagaaatcttaaaaaagcacaagactct
gtctttcgcacagagaaagaaataaaagatactgagaaagaagtagatgacttaacagca
gagctaaaaagtcttgaagacaaagcagcggaggtcgtaaagaatgcaaatgctgcagag
gagtccttaccagagatccagaaagaacatcgtaacctacttcaagaactaaaagtaatt
caggaaaatgaacatgctcttcaaaaagatgcacttagtattaagttgaaacttgaacaa
gtagatggtcatattggtgaacataattctaaaataaaatactggcaaaaagagatctca
aaaatatcattgcatcccatagaagataatcctgttgaagagattccacttctaagccca
gaatatcttgaagcaatcaagaacccagattccataacaaatcaaattgcactcttggaa
gcccagtgtcatgaaatgaaaccaaaccttggtgccattgcagagtataaaaagaaggaa
gaattatatttacaacgggtagcagaattggacaaaattacttatgaaagagataatttt
agacaggcatatgaagatcttcggaaacaaagacttaatgaattcatggcaggtttttat
ataataacaaataaattaaaggaaaattaccaaatgcttactttgggaggtgatgccgag
ctggagcttgtagacagcttggatcctttctctgaaggaatcatgttcagtgtccgacca
cctaagaaaagttggaagaagatcttcaacctttcaggaggagagaaaacacttagttca
ttggctttagtatttgctcttcaccactacaaacccactcccctgtacttcatggatgag
attgatgcagcccttgatttcaaaaatgtttccattgttgcattttatatatatgaacaa
acaaaaaatgcccagttcataataatttctcttcgaaataatatgtttgagatttcagat
agacttattggaatttacaagacatacaatataacaaaaagtgttgcagtaaacccgaaa
gaaattgcatctaaaggactttgctaa
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