Lipotes vexillifer (Yangtze River dolphin): 103080303
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Entry
103080303 CDS
T03090
Symbol
VCP
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve04137
Mitophagy - animal
lve04141
Protein processing in endoplasmic reticulum
lve05014
Amyotrophic lateral sclerosis
lve05022
Pathways of neurodegeneration - multiple diseases
lve05134
Legionellosis
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
103080303 (VCP)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
103080303 (VCP)
09160 Human Diseases
09171 Infectious disease: bacterial
05134 Legionellosis
103080303 (VCP)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
103080303 (VCP)
05022 Pathways of neurodegeneration - multiple diseases
103080303 (VCP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lve03019
]
103080303 (VCP)
03009 Ribosome biogenesis [BR:
lve03009
]
103080303 (VCP)
04131 Membrane trafficking [BR:
lve04131
]
103080303 (VCP)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lve04147
]
103080303 (VCP)
Messenger RNA biogenesis [BR:
lve03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
103080303 (VCP)
Ribosome biogenesis [BR:
lve03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
103080303 (VCP)
Membrane trafficking [BR:
lve04131
]
SNARE
SNARE associated proteins
Others
103080303 (VCP)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
103080303 (VCP)
Exosome [BR:
lve04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
103080303 (VCP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
AAA_22
TIP49
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
ATPase_2
IstB_IS21
AAA_18
AAA_7
ATPase
DUF815
ABC_tran
AAA_24
NB-ARC
TsaE
ResIII
NACHT
Sigma54_activat
Viral_helicase1
SLFN-g3_helicase
KAP_NTPase
DUF3944
Zot
Motif
Other DBs
NCBI-GeneID:
103080303
NCBI-ProteinID:
XP_007456006
UniProt:
A0A340X3U9
LinkDB
All DBs
Position
Unknown
AA seq
806 aa
AA seq
DB search
MASGADSKGDDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLK
GKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVHLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIG
GLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRV
INQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKAN
LRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAM
EVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSGNQGG
AGPSQGSGAGTGGSVYTEDNDDDLYG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcctccggagctgattcaaaaggtgatgatttatcaacagccatccttaaacagaag
aaccgtcccaatcggttaattgttgatgaagccatcaatgaggacaacagtgtggtatcc
ttgtcccagcccaagatggatgagctgcagttgttccgaggtgacacggtgttgctgaaa
ggaaagaagaggcgggaagctgtgtgcattgtgctttctgatgacacatgttctgatgag
aagattcgaatgaatagagttgttcggaataaccttcgcgtacacctgggggatgtcatc
agcatccagccatgccctgatgtgaagtacggcaaacgtatccatgtactacccatcgat
gacacggtggaaggcatcactggcaatctctttgaggtttaccttaagccatacttcctg
gaagcttatcgacccattcggaaaggagacattttccttgtccggggtggaatgcgtgcc
gtagagttcaaagtagtggagacagatcccagtccttactgtattgttgctccagacaca
gtgattcactgtgaaggggagcctatcaaacgagaggatgaggaagagtctttgaatgaa
gtgggctatgatgacattggtggctgccggaagcagctagctcagataaaggagatggtg
gagctgcccctgagacatcctgctctctttaaggcaattggtgtgaagcctcctcgggga
atcctgctctatggacctccagggactggaaagacgctgattgctcgagctgtggcaaat
gagactggtgccttcttctttttgatcaatggtcctgagatcatgagcaagttggctggt
gagtctgagagcaaccttcgtaaagcctttgaagaggctgagaagaatgctcctgctatt
attttcattgatgagttggatgccattgctcccaaaagagagaaaacccatggggaggtg
gagcggcgtatcgtatcccagttgttgaccctcatggatggcctaaagcagagagcccat
gtcattgttatggcagcaaccaatagacccaacagcattgacccagccctacgacgattt
ggtcgctttgacagggaggtagatattggaatccctgatgctacaggacgcttggaaatt
cttcagatccacaccaagaacatgaagctggcagatgatgtggaccttgagcaggtagcc
aatgaaactcatgggcatgtgggcgctgacttagcagccctgtgctcggaggctgctctg
caagccatccgcaagaagatggacctcattgacctagaggacgagaccatcgatgctgag
gtcatgaactccctggcagttactatggatgacttccgatgggccctgagccagagcaac
ccatcagcactgcgggaaactgtggtagaggtaccacaggtgacctgggaggacattggg
ggcctggaggatgtcaaacgtgagcttcaggagctggtccagtatcctgtggagcaccca
gacaaattcctcaagtttggtatgacaccttccaagggagtactgttctatggacctcct
ggttgtgggaaaaccttgctggccaaagccattgctaatgagtgccaggccaacttcatc
tccatcaagggtcctgagctgctcaccatgtggtttggggagtctgaggccaacgtcaga
gaaatctttgacaaggcccgccaagctgccccctgtgtactgttctttgatgagctggat
tcgattgccaaggcccgtggtgggaacattggagatggtggtggggctgctgaccgagtc
atcaaccagatcctgacagaaatggatggcatgtccacaaaaaaaaatgtgtttatcatt
ggcgctaccaaccggcctgacatcattgatcctgccattctgcgacctggccgccttgat
cagctcatctacatcccacttcctgatgagaagtcccgtgttgccattctcaaggccaac
ctgcgcaagtccccagttgccaaggatgtggatttggagttcctggctaagatgactaat
ggcttctctggagctgacttgacagagatttgccaacgtgcttgcaagctggccatccgt
gaatcgatcgagagtgagatcaggcgagaacgggagaggcagaccaacccatcagccatg
gaggtagaagaggatgatccagtgcctgagatccgccgagatcactttgaggaagccatg
cgctttgcccgccgttctgtcagtgataatgacatcaggaagtatgagatgtttgctcag
acccttcaacagagtcggggctttggcagcttcagattcccttcaggaaaccaaggtgga
gctggccccagtcagggcagtggtgctggcacaggtggcagtgtgtacacggaagataac
gacgatgacttgtatggctaa
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