Lipotes vexillifer (Yangtze River dolphin): 103080451
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Entry
103080451 CDS
T03090
Symbol
SMARCA2
Name
(RefSeq) probable global transcription activator SNF2L2-like isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve03082
ATP-dependent chromatin remodeling
lve04714
Thermogenesis
lve05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103080451 (SMARCA2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
103080451 (SMARCA2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
103080451 (SMARCA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lve03021
]
103080451 (SMARCA2)
03036 Chromosome and associated proteins [BR:
lve03036
]
103080451 (SMARCA2)
Transcription machinery [BR:
lve03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103080451 (SMARCA2)
Chromosome and associated proteins [BR:
lve03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
103080451 (SMARCA2)
Chromatin remodeling factors
BAF complex
103080451 (SMARCA2)
PBAF complex
103080451 (SMARCA2)
GBAF(ncBAF) complex
103080451 (SMARCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
103080451
NCBI-ProteinID:
XP_007466817
UniProt:
A0A340Y2Y1
LinkDB
All DBs
Position
Unknown
AA seq
1559 aa
AA seq
DB search
MSTPTDPGAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHPMPSM
GSADFPQEGMHQMHKPIDGMHDKGVVEDIHCGSMKGTAMRPPHPGMGPPQSPMDQHSQGY
MSPHPSPLGAPEHVSSPISGSGPTAPQMPPSQPGTLIPGDPQAMSQPNRGPSPFSPVQLH
QLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGMQQQQAAPQPQPPPQPQPPPPPQQQA
LVNYSRPSGPGPELSGPSPPQKLPVPAPSGRPSPAPPAAAPPPAAAVPGPSVPQPTPGQP
SPILQLQQKQSRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELENLPGSLPPDLRTK
ATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQ
QKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHANTEREQKKET
ERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVWEHKQAQAAKE
KKKRRRKRKAEENAEGEESALGPDGEPIDESSQMSDLPVKVTHTETGKVLFGPEAPKASQ
LDAWLEMNPGYEVAPRSDSEESDSDYEEEDEEEESSRQETEDKILLDPNSEEVSEKDAKQ
IIETAKQDVDDEYSMQYSARGSQSYYTVAHAISERVEKQSALLINGTLKHYQLQGLEWMV
SLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWA
PSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRM
KNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAP
FAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKI
LYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYS
NGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRL
DGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQA
QDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAF
LKAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLME
EDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQWLRTLKAIEDGN
LEEMEEEVRLKKRKRRRNVDKDPAKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDT
VINYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDV
MLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEDESNEDEDEEEEDESESE
AKSVKVKIKLNKKDDKGRDKGKGKKRPNRGKAKPVVSDFDSDEEPDGNEQSEASGTDDE
NT seq
4680 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgcccacagaccctggtgcgatgccccacccagggccttcgccagggccggga
ccctctcctggaccaattcttgggcccagtccaggacctggaccatccccaggttccgtc
cacagtatgatggggccaagtcctgggcctccaagtgtctcacaccctatgccatcgatg
gggtctgctgacttcccgcaggaaggcatgcatcaaatgcataagcccattgatggtatg
cacgacaagggggttgtggaagatatccattgtggatccatgaagggcaccgctatgcga
cctcctcatccaggaatgggccctccccagagtccgatggaccaacacagccaaggctac
atgtcaccgcacccgtctccgctgggagcccccgagcacgtctccagccctatatcggga
agtggcccaaccgcaccgcagatgccaccaagccagccagggaccctcatcccaggcgac
ccgcaggcgatgagccagcccaacagggggccctcgcctttcagtcccgtccagctgcat
cagctgcgagctcagattttagcttacaaaatgctggcccggggccagcccctcccggaa
acgctgcagctcgcggtccaggggaaaaggacgttgccgggcatgcagcagcagcaggcg
gcgcctcagccgcagccaccgccgcagccgcagccaccgccgccgccgcagcagcaggcc
cttgtcaactacagcaggccatctggcccggggccggagctgagcggcccgagccccccg
cagaagctgccggtgcccgcgcccagcggccggccctcgcccgcgccccctgcagcagca
ccgccacccgcagccgccgtgcccgggccctcggtgccgcagccgaccccagggcagccc
tcgcccatcctgcagctgcagcagaagcagagccggatcagccccatccagaaaccgcag
ggcctggaccccgtggagattctgcaggagcgggagtacagacttcaggctcgcatagcc
cataggatacaggaactggaaaatctccctggctctttgccaccagatttacgaaccaaa
gcaaccgtggaactgaaagcacttcggttactcaatttccagcgtcagctgagacaggag
gtagtggcctgcatgcgacgggacacgaccctggagacggccctcaactccaaagcatac
aaacggagcaagcgccagaccctgagggaagcccgcatgacagagaagctggagaagcag
cagaagatcgagcaggagaggaagcgtcggcagaagcaccaggaatacctgaacagtatt
ttgcagcatgcaaaagattttaaggagtaccatcggtctgtggccgggaagatccagaag
ctttccaaagcagtggccacttggcacgccaacactgaaagggagcagaagaaggagacc
gagcggatcgaaaaggagagaatgcggagattgatggctgaagatgaagagggctataga
aaactgatcgaccaaaagaaagacaggcgtttagcgtacctcttgcagcagaccgatgag
tatgtggccaacctgactaatctggtttgggagcacaagcaagcccaggcggccaaagag
aagaagaagaggaggaggaagaggaaggctgaagaaaatgcggagggggaggagtctgcc
ctgggaccagacggagagcccatagatgagagcagccagatgagtgacctccctgtcaaa
gtgactcacacagaaaccggcaaggtcctgtttggcccagaagcacccaaagcaagtcag
ctggatgcctggttggaaatgaatcctggttacgaagttgcccctagatcggacagtgaa
gagagtgattctgattatgaggaggaggatgaagaggaagagtccagtaggcaggaaact
gaagacaaaatacttctggatccaaacagcgaagaggtttcagagaaggacgctaagcag
atcatcgagacagccaagcaagacgtggacgatgagtacagcatgcagtacagtgccagg
ggttcccagtcctactacacggtggcccacgccatctcggagagggtggagaagcagtcg
gccctcctcatcaatgggaccctgaagcattatcagctccagggcctggaatggatggtt
tctctgtataataacaatttgaacggaatcttagctgatgaaatggggctgggaaagacc
atacagaccattgcactcatcacttatctgatggagcacaaaagactcaatggcccctat
ctcatcattgttcccctttcgactctatctaactggacgtatgaatttgacaaatgggct
ccttccgtggtgaaaatttcttacaagggcacccctgccatgcgtcgctccctcgtcccc
cagttacggagtggcaaattcaatgtcctcctgactacttatgagtacattataaaagac
aagcacattcttgcaaagattcggtggaaatatatgatagtggacgaaggccaccgaatg
aagaatcaccactgcaagctgactcaggtcctgaacactcactacgtggcccccagaagg
atcctcttgaccgggacccccctgcaaaataaactcccggaactctgggcgctcctcaac
ttcctccttcccacaatttttaagagctgcagcacatttgagcagtggtttaatgctcca
tttgccatgactggagaaagggtggacttaaatgaagaagaaactatattgatcatcagg
cgtctgcataaggtgttgagaccatttttactgaggagactgaagaaagaagttgaatcc
cagcttccagaaaaagttgaatatgtgatcaagtgtgacatgtcagctctacagaagatt
ctgtatcgccatatgcaagccaaagggatcctcctcacagacggttcggagaaagataag
aaggggaaaggaggcgctaagacacttatgaacactatcatgcagttgagaaaaatctgc
aatcacccatatatgtttcagcacattgaggaatcctttgctgaacacctgggctattca
aatggggtcatcaatggggctgagctgtatcgggcctcaggaaagtttgagctgcttgat
cgtattctgccaaaattgagagcgactaatcaccgcgtgctgcttttctgccagatgacg
tctctcatgaccatcatggaggattactttgcttttcggaacttcctttacctgcgcctt
gatggcaccaccaagtctgaagatcgtgctgctttgctgaagaaattcaacgaacctggg
tcccagtatttcattttcttgctgagcacaagagctggaggcctgggcttaaacctccag
gcagctgataccgtggtcatctttgacagcgactggaatcctcatcaggacctgcaagca
caagaccgcgctcaccgcatcggccagcagaacgaggtccgcgtgctgagactctgcacc
gtgaacagtgtggaggaaaagatcctcgcagccgccaagtacaagctgaatgtggatcag
aaagtgatccaggcaggcatgtttgatcagaagtcttcaagccacgagcggagggcattc
ctaaaagccatactggagcacgaagaggaaaatgaggaagaagatgaagtgcccgacgat
gagactctgaaccaaatgatcgctcgacgagaggaggaatttgatctttttatgcgcatg
gacatggaccggcggagggaggatgcccggaacccaaaacgcaagccccgcctgatggag
gaggatgagctgccctcctggattattaaagatgacgccgaggtggaacggctgacgtgt
gaggaagaggaagagaagatcttcgggagggggtctcgccagcgccgggacgtggactac
agcgacgccctcacagagaagcagtggctgaggacattgaaagccattgaagacggcaat
ttggaagaaatggaagaggaagtacggcttaagaagcgaaaaagacgaagaaatgtggat
aaagatcctgcaaaagaagatgtggaaaaggccaagaagaggagaggtcgccctccagct
gagaaactgtcaccaaacccccctaaactgacaaagcagatgaacgctatcattgatact
gtgataaactacaaagacagttcagggcgacagctcagtgaagtcttcattcagttacct
tcaagaaaagaattaccagaatactatgaattaattaggaaaccggtggatttcaaaaaa
ataaaggaaagaatccgtaatcataagtaccgaagcctgggtgacctggagaaagacgtc
atgcttctctgtcacaatgctcagacgttcaacttggagggatcccagatctacgaagac
tccatcgtcttacagtcggtgttcaagagtgctcggcagaaaattgccaaagaagaagag
agtgaggacgagagcaacgaagacgaggacgaggaagaggaagacgagtcagagtcagag
gcaaaatctgttaaggtgaaaatcaagctcaataaaaaagatgacaaaggccgggacaaa
ggaaaaggcaagaaaaggccaaatcgaggaaaagccaaacctgtggtgagcgattttgac
agcgatgaagagccggatggaaatgaacagtcagaagcaagtgggactgatgatgagtga
DBGET
integrated database retrieval system
