Lipotes vexillifer (Yangtze River dolphin): 103080497
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Entry
103080497 CDS
T03090
Symbol
SS18
Name
(RefSeq) protein SSXT isoform X1
KO
K15623
protein SSXT
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve03082
ATP-dependent chromatin remodeling
lve05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103080497 (SS18)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
103080497 (SS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lve03036
]
103080497 (SS18)
Chromosome and associated proteins [BR:
lve03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
103080497 (SS18)
GBAF(ncBAF) complex
103080497 (SS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
103080497
NCBI-ProteinID:
XP_007458451
UniProt:
A0A340XAK1
LinkDB
All DBs
Position
Unknown
AA seq
418 aa
AA seq
DB search
MSVAFAAPRQRGKGEITPAAIQKMLDENNHLIQCIMDYQNKGKTSECSQYQQMLHTNLVY
LATIADSNQNMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRSHNMPSDGMVAGGPPAPHMQ
SQMNGQMPGPNHMPMQGPGPNQLNMTNSSMNMPSSSHGSMGGYSHSVPSSQSMPVQNQMT
MSQGQPMGNYGPRPNMNIQPNQGPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMGQVNQ
GNHMMAQRQIPPYRPPQQGPPQQYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHNDYGY
QQPSYPEQGYDRPYEDSSQHYYEGGNSQYGQQQDAYQGPPPQQGYPAQQQQYPGQQGYPG
QQQGYGPSQGGPGPQYPNYPQGQGQQYGGYRPAQPGPPQPPQQRPYGYDQGQYGNYQQ
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtggcgttcgcggccccgaggcagcgcggcaagggggagatcactcccgctgcg
attcagaagatgttggatgaaaataaccatcttattcagtgtataatggactatcagaat
aaaggaaagacctcagagtgttctcagtatcaacagatgctgcatacaaacttggtctac
cttgctacaatagcagattctaatcaaaacatgcagtctcttttaccagcaccacccaca
cagaatatgcctatgggtcctggagggatgaatcagagcggccctcccccacctccacgc
tcacacaacatgccttcagatggaatggtagctgggggtcctcctgcaccacacatgcag
agccagatgaacggccagatgcctgggcctaaccatatgcctatgcagggacctggaccc
aatcaactcaatatgacaaacagttccatgaatatgccttcaagtagccacgggtccatg
ggaggttacagccattccgtgccatcgtcccagagcatgccggtacagaaccagatgact
atgagtcaagggcagccaatgggaaactatggccccagaccaaatatgaatattcaacca
aaccaaggtccaatgatgcaccagcagcctccttctcaacagtacaatatgccgcaggga
ggtgggcagcattaccaaggccagcagccacctatgggaatgatgggtcaagttaaccag
ggcaatcatatgatggcacagagacagattcctccctatagaccaccgcaacagggccca
ccacagcagtactcaggccaggaagactattatggggaccagtacagtcatggtggacaa
ggtcctccagaaggcatgaaccagcaatattaccctgatggtcataatgattacggttat
cagcaaccgtcgtatcctgaacaaggctacgataggccttatgaggattcctcacaacat
tactacgaaggagggaattcacagtatggccaacagcaagatgcttaccaaggaccacct
ccccaacagggatatccagcccagcagcagcagtacccggggcagcagggctacccagga
cagcagcagggctacggtccttcgcagggtggtccaggtcctcagtaccctaactacccg
caggggcaagggcagcagtatggaggttacagaccagcccagcctgggccaccccagccc
ccgcagcagaggccttacgggtatgaccagggacagtatggaaattaccagcagtga
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