Lipotes vexillifer (Yangtze River dolphin): 103080513
Help
Entry
103080513 CDS
T03090
Symbol
PRPF6
Name
(RefSeq) pre-mRNA-processing factor 6 isoform X1
KO
K12855
pre-mRNA-processing factor 6
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103080513 (PRPF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lve03041
]
103080513 (PRPF6)
Spliceosome [BR:
lve03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
103080513 (PRPF6)
Complex C
U5 SnRNP specific factors
103080513 (PRPF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP1_N
TPR_14
TPR_19
HAT_PRP39_N
TPR_16
Suf
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_17
FAT
ARM_TT21_2nd
T7SS_EccA1_N
Motif
Other DBs
NCBI-GeneID:
103080513
NCBI-ProteinID:
XP_007462288
UniProt:
A0A340XLI6
LinkDB
All DBs
Position
Unknown
AA seq
941 aa
AA seq
DB search
MNKKKKPFLGMPAPLGYVPGLGRGATGFTTRSDIGPARDANDPVDDRHAPPGKRTVGDQM
KKSQAADDDDEDLNDTNYDEFNGYAGSLFSSGPYEKDDEEADAIYAALDKRMDERRKERR
EQREKEEIEKYRMERPKIQQQFSDLKRKLAEVTEEEWLSIPEVGDARNKRQRNPRYEKLT
PVPDSFFAKHLQTGENHTSVDPRQTQFGGLNTPYPGGLNTPYPGGMTPGLMTPGTGELDM
RKIGQARNTLMDMRLSQVSDSVSGQTVVDPKGYLTDLNSMIPTHGGDINDIKKARLLLKS
VRETNPHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWLEAARLQPGDTAKA
VVAQAVRHLPQSVRIYIRAAELETDIRAKKRVLRKALEHVPNSVRLWKAAVELEEPEDAR
IMLSRAVECCPTSVELWLALARLETYENARKVLNKARENIPTDRHIWITAAKLEEANGNT
QMVEKIIDRAITSLRANGVEINREQWIQDAEECDKAGSVATCQAVMRAVIGIGIEEEDRK
HTWMEDADSCVAHSALECARAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRA
VAHCPKAEVLWLMGAKSKWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENNEYER
ARRLLAKARSSAPTARVFMKSVKLEWVLGNIAAAQELCEEALKHYEDFPKLWMMKGQVEE
QGDLVDKAREAYSQGLKKCPHSTPLWLLLSRLEEKVGQLTRARAILEKSRLKNPKNPGLW
LESVRLEYRAGLKNIASTLMAKALQECPNSGVLWSEAVFLEARPQRKTKSVDALKRCEHD
PHVLLAVAKLFWSERKVTKAREWFHRTVKIDSDLGDAWAFLYKFELQHGTEEQREEVKRR
CENAEPRHGELWCATSKDIANWQRKIGEILVLVAARIKNTF
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaagaagaagccgttcttgggcatgcccgccccgctcggctacgtgccgggg
ctgggccgcggtgccactggcttcaccacccgctcggacatcgggcccgcccgcgatgcc
aatgatcccgtggatgaccgccacgcccccccaggcaagaggaccgtcggggaccagatg
aagaagagccaggctgcggatgacgacgacgaggacctcaacgacaccaactatgatgag
tttaacggctatgctgggagcctcttctcaagtgggccctacgagaaagatgacgaggaa
gcagatgctatctatgcggccctggataaaaggatggatgaaagaaggaaagagagaagg
gagcaaagggagaaagaagaaattgagaaataccgtatggagcgccccaaaatccagcag
cagttctcagacctcaaaaggaagttggcagaagtcacagaagaggagtggctgagcatc
cctgaggtcggcgatgccagaaacaagcgccagcggaacccccgctacgagaagctgacc
cctgttcccgacagcttctttgccaaacatttacagaccggggagaaccacacttcagta
gatccccggcagactcaatttggaggtctgaacacaccctatccaggcggactgaacact
ccatacccaggtgggatgacacctggattgatgacacccggcacaggtgagctggacatg
aggaagatcggccaagccaggaacaccttgatggacatgaggctgagccaggtatctgac
tcggtgagtgggcagactgtggttgaccccaaaggctatctgacagatttgaattccatg
atcccgactcatggaggggacatcaatgacatcaagaaggccaggctgctcctcaagtct
gttcgggagacaaaccctcaccacccgccagcctggatcgcgtcggcccgcctggaggaa
gtcactgggaagctgcaggtggctcggaacctcatcatgaaggggacagagatgtgcccc
aagagtgaagatgtgtggctggaagcagcgaggctgcagcctggggacacagccaaggcc
gtggtggcccaagctgtccgtcacctcccacagtccgttaggatttacatcagagcagct
gagctggagacagacatccgcgccaagaaacgggttcttcgaaaagcccttgagcacgtt
ccaaactcagttcgcttgtggaaggcggccgtggagctggaagagcccgaagatgctaga
atcatgctcagccgagctgtggagtgctgccccactagcgtggagctctggctcgccctg
gccaggctagagacctacgaaaatgcccgcaaggtcttaaataaggcccgggagaacatc
cctacggaccggcacatctggatcacggctgccaagctggaggaggccaatgggaacacg
cagatggtggagaagatcatcgaccgcgccatcacctccctgcgggccaacggcgtggag
atcaaccgcgagcagtggatccaggatgccgaggagtgtgacaaggctgggagtgtggcc
acctgccaggcggtcatgcgtgccgtgattgggattggcattgaggaggaagaccggaag
cacacgtggatggaagatgctgacagctgtgtagcccacagcgccctggagtgtgcccga
gccatctacgcctacgccctgcaggtcttccccagcaagaagagtgtgtggctgcgggcc
gcgtactttgagaagaaccacggcaccagggagtccctggaggccctgctgcagcgggcc
gtggcccactgccccaaagcagaggtgctgtggctcatgggcgccaagtccaagtggctg
gccggggacgtgcccgccgcgaggagcatcctggctctggccttccaggctaaccccaac
agcgaggagatctggctggcggccgtgaagctggagtccgagaacaacgagtacgagcgg
gcccgcaggctgctggccaaggcccggagcagcgcgcccaccgcccgggtgttcatgaag
tctgtgaagctggagtgggtgctggggaacatcgcggctgcgcaggagctgtgcgaagag
gccctgaagcactacgaggacttccccaagctctggatgatgaagggccaggtcgaggag
cagggggaccttgtggacaaggcccgggaggcctacagccaggggttgaagaaatgtccc
cactccacacccctgtggcttttgctttcccggctggaggagaaggttgggcagctgacc
cgagctcgggccatcctggagaagtctcgcctgaagaacccgaagaaccccggcctgtgg
ctggagtctgtgcggctggagtaccgcgcggggctgaagaacatcgccagcacgctcatg
gccaaggcgctgcaggagtgccccaactccggggtcctgtggtctgaagctgtcttcctg
gaggcgaggccccagcgaaagaccaagagcgtggatgccctgaagaggtgtgagcatgac
ccccacgtgctcctggctgtggccaagctgttctggagcgagcggaaggtcaccaaggcc
cgggagtggttccaccgcaccgtgaagatcgactcggacctgggcgacgcctgggccttc
ttgtacaagtttgagctgcagcacggcacagaggagcagcgggaggaggtgaaaaggcgc
tgcgagaacgccgagccccggcacggggagctgtggtgcgccacgtccaaggacatcgcc
aactggcagcggaagatcggggagatcctggtgctggtggcagcccgcatcaagaacacc
ttctga
DBGET
integrated database retrieval system
