Lipotes vexillifer (Yangtze River dolphin): 103080516
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Entry
103080516 CDS
T03090
Symbol
VLDLR
Name
(RefSeq) very low-density lipoprotein receptor isoform X1
KO
K20053
very low-density lipoprotein receptor
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve05017
Spinocerebellar ataxia
lve05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
103080516 (VLDLR)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
103080516 (VLDLR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lve04131
]
103080516 (VLDLR)
Membrane trafficking [BR:
lve04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
103080516 (VLDLR)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
EGF_LRP2
EGF
Mucin
hEGF
DUF4010
Motif
Other DBs
NCBI-GeneID:
103080516
NCBI-ProteinID:
XP_007464255
UniProt:
A0A340XYK8
LinkDB
All DBs
Position
Unknown
AA seq
878 aa
AA seq
DB search
MGTSARWALWLLLALCWAPRESGTTGAGRKAKCEPSQFQCTNGRCITLLWKCDGDEDCAD
GSDEKNCVKKTCAESDFVCNNGQCVPNRWQCDGDPDCEDGSDESPEQCHMRTCRISEISC
GARSTQCIPVSWRCDGENDCDSGEDEENCGNITCSPDEFTCSSGRCISRNFVCNGQDDCS
DGSDELDCTPPTCGAHEFQCSTSSCIPISWVCDDDADCSDQSDESLEQCGRQPVIHTKCP
ASEIQCGSGECIHKKWRCDGDPDCKDGSDEVNCPSRTCQPDQFECEDGSCIHGSRQCNGI
RDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIDISKVCNQEQDCRDWSDEPLKECHVNEC
LVNNGGCSHICKDLVIGYECDCAAGFELIDRKTCGDIDECQNPGICSQICINLKGGYKCE
CSRGYQMDLATGVCKAVGKEPSLIFTNRRDIRKIGLERKEYIQLVEQLRNTVALDADIAA
QKLFWADLSQKAIFSASIDDKVGRHVKMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVA
TLDGTKRKFLFNSDLREPASIAVDPLSGFVYWSDWGEPAKIEKAGMYXXXXNGFDRRALV
TADIQWPNGITLDLIKGRLYWLDSKLHMLSSVDLNGQDRRVVLKSLEFLAHPLALTIFED
RVYWIDGENEAVYGANKFTGSELATLVNNLNDAQDIIVYHALVQPSGKNWCKEDMENGGC
EYLCLPAPKINDHSPKYTCSCPNGYSLEDNGRECQSTATTVTYSETKDTNTTEMSPTSGL
APGEINVTTAVSEVSVPPKGTSAAWAILPLLLLAMAAVGGYLMWRNWQHKNMKSMNFDNP
VYLKTTEEDLSIDIGRHSASVGHTYPAISVVSTDDDLA
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgggcacgtccgcgcgctgggcgctctggctgctgctcgcgctgtgctgggcgccccgg
gagagcggcaccaccggagcgggaagaaaagccaaatgtgaaccctcccaattccagtgc
acaaatggccgctgtattacgctgctgtggaaatgcgatggggatgaagattgtgctgat
ggcagtgacgaaaagaactgtgtgaagaagacgtgtgccgagtctgacttcgtgtgcaac
aatggccagtgtgttcccaaccgatggcagtgtgatggggatcccgactgtgaagatggt
tctgatgaaagcccagagcagtgccatatgagaacatgccgcataagtgaaatcagctgt
ggtgcccgttccactcagtgtatcccagtgtcctggagatgtgatggtgaaaatgattgt
gacagtggagaagatgaagaaaactgtggcaacataacgtgcagccctgatgagttcact
tgctccagtggccgctgcatctccaggaatttcgtgtgcaatggccaggatgattgtagc
gacggcagtgacgagcttgactgcaccccacccacctgcggggcccatgagttccagtgc
agcacctcctcctgcatccccatcagctgggtgtgcgatgacgacgcagactgctcggac
cagtcagatgagtccctcgagcagtgtggccgccagccagtgatccacaccaagtgcccg
gccagcgagatccagtgcggctctggcgagtgcatccacaagaagtggcgatgtgacggg
gatcctgattgcaaggatggcagcgatgaggtcaactgtccctcccgaacctgccaacct
gaccagtttgagtgcgaggatggtagctgcatccacggcagcaggcagtgtaacggcatc
cgagactgtgtcgacggttctgatgaagtcaactgcaaaaatgtcaatcagtgcttgggc
cctgggaaattcaagtgcagaagcggggaatgcatagatatcagtaaagtgtgtaaccag
gagcaggactgcagggactggagtgatgagcccctgaaagaatgtcatgtaaatgaatgc
ttggttaataatggcggatgctcccatatctgcaaagacctagttataggctacgaatgt
gactgtgcagctgggtttgaactgatagataggaaaacctgtggagatattgacgaatgc
caaaatccgggaatctgcagtcaaatttgtatcaacttaaaaggcggttacaagtgtgaa
tgtagtcgtggctatcaaatggatcttgccactggcgtgtgcaaggcagtaggcaaagag
ccaagtctgatcttcactaatagacgagacatcaggaagattggcttggagaggaaagaa
tatatccaactagttgaacagctaagaaacactgtggctctcgatgctgacattgctgct
cagaaactattctgggctgatctaagccaaaaggccatcttcagtgcctcaattgatgac
aaggttggtagacatgttaaaatgatcgacaatgtctataatcctgcagccattgctgtt
gattgggtgtacaagaccatctactggactgatgcggcttctaagactatttcagtagct
accctagatggaaccaagaggaagttcctgtttaactctgacttgcgagagcctgcctcc
atagctgtggacccgttgtctggctttgtttactggtcagactggggtgaaccagctaaa
atcgaaaaagcaggaatgtatnnnnnnnnnntgaatggatttgacagacgggcgctggtg
acagcggacattcagtggcctaacggaattacacttgacctcataaagggccgcctctat
tggctggattccaagttgcacatgttatccagtgtggacttgaacggccaagatcgcagg
gtagtcctaaagtctctggaattcctagctcatcccctcgcactcacaatatttgaggat
cgtgtctactggatagatggggaaaatgaagccgtctacggcgccaataaattcactgga
tcggagctggccactcttgttaacaaccttaacgatgcccaagacatcatcgtctatcat
gcacttgtacagccatcaggtaaaaattggtgcaaagaagacatggagaatggaggatgt
gaatacctctgcctgccagccccaaagattaatgaccactctccaaaatatacctgttcc
tgtcccaatggatacagtctagaggacaatggccgagagtgccaaagtactgcaactact
gtgacttacagtgagacaaaagataccaacacaacagaaatgtcaccaactagtggacta
gctcctggagagatcaatgtgaccacagcagtatcggaggtcagtgttcccccaaaaggg
acttctgctgcctgggccatccttcccctcttgctcttagcaatggcagcagtaggtggc
tacttgatgtggcggaactggcaacacaagaacatgaaaagcatgaactttgacaatcct
gtgtacttgaagaccactgaagaggacctgtcaatagacattggtagacacagtgcttct
gtcggacacacgtacccagcaatatccgttgtaagcacagacgacgatctagcttga
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