KEGG   Lipotes vexillifer (Yangtze River dolphin): 103081335
Entry
103081335         CDS       T03090                                 
Symbol
POLR2D
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
lve  Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve03020  RNA polymerase
lve03420  Nucleotide excision repair
lve05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:lve00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    103081335 (POLR2D)
  09124 Replication and repair
   03420 Nucleotide excision repair
    103081335 (POLR2D)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    103081335 (POLR2D)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lve03021]
    103081335 (POLR2D)
   03400 DNA repair and recombination proteins [BR:lve03400]
    103081335 (POLR2D)
Transcription machinery [BR:lve03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     103081335 (POLR2D)
DNA repair and recombination proteins [BR:lve03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      103081335 (POLR2D)
SSDB
Motif
Pfam: RNA_pol_Rpb4 Maelstrom Tfb4
Other DBs
NCBI-GeneID: 103081335
NCBI-ProteinID: XP_007461358
UniProt: A0A340XIV3
LinkDB
Position
Unknown
AA seq 142 aa
MAAGGSDLRAGDVEEDASQLIFPKEFETAETLLNSEVHMLLEHRKQQNESAEDEQELSEV
FMKTLNYTARFSRFKNRETIASVRSLLLQKKLHKFELACLANLCPETAEESKALIPSLEG
RFEDEELQQILDDIQTKRSFQY
NT seq 429 nt   +upstreamnt  +downstreamnt
atggcggctggtggcagtgatctgcgggctggcgacgtagaggaggacgcctcacagctc
atctttcccaaagagtttgaaacagctgagacacttctaaattcagaagttcatatgctt
ctggagcatcgaaagcaacaaaatgagagtgcagaggatgaacaggaactttctgaggtc
ttcatgaagactttaaactacacagcccgtttcagtcgtttcaaaaacagagagaccatt
gccagtgtacgtagcttgctgctccagaagaagcttcataagtttgagttggcctgttta
gccaacctttgtccagagactgctgaggagtccaaggctctgatcccaagcctggagggg
cggtttgaagacgaggagctacagcagattcttgatgacatccagaccaagcgcagtttt
cagtattga

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