Lipotes vexillifer (Yangtze River dolphin): 103081461
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Entry
103081461 CDS
T03090
Symbol
USP42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lve01002
]
103081461 (USP42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lve04121
]
103081461 (USP42)
Enzymes [BR:
lve01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
103081461 (USP42)
Peptidases and inhibitors [BR:
lve01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
103081461 (USP42)
Ubiquitin system [BR:
lve04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
103081461 (USP42)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
103081461
NCBI-ProteinID:
XP_007448960
UniProt:
A0A340WPN8
LinkDB
All DBs
Position
Unknown
AA seq
1332 aa
AA seq
DB search
MTTGDKASESSDPSTCQKQPGSSEAVSPGDMEAGSASWGTVSSLNDVSSHALSLGPVPGA
VVYSSSPVPEKSKPSPPKDQALGDGIAPPEKILFPSEKICLKWQQTHRVGAGLQNLGNTC
FANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQVLNHPGDVIKPMFVI
NEMRRIARHFRFGSQEDAHEFLQHTVDAMQKACLNGSNKLDRHTQATTLVCQIFGGYLRS
RVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQLDGENSYKCSKCKNMVPA
SKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPIIYDLYAVL
VHTGFNCHAGHYFCYIKASNDLWYQMNDSIVSISDIRSVLSQQAYVLFYIRSHDVKIGGE
LTHSAHSPGQSSPQPVISQRVVSNTQAASGFIGPQLPSHMMKNPPHLNGTGPLKEMPSSS
MSSPNGNSNVSRTGPVNASTSVQDWSVNRPSVIPEHPKKQKITISIHSKLPVQKIQSQPT
LHSSSLESPNKPAPSSTVTTSTAIQSTSSPPMMPASSKVTKQITLRESCPEPVTNGRSKL
SSGVLVPYGAESSEESDEEAKGLGKENSLRPAESARAPVPVAEDVGASPHELREPVALNG
ATSMDSDLKENSLPSGAASCQVQPALHSENPFSKANSLPGKLMPAPLPLLPEDKILETFK
LGSKGKGSTDEMSTTGTEERPPQDPEAELEPGSSAPDSRENLELVMSLSSKFKKVLSPSD
ASIKPTKEEVSENILAKPEEALPSINTFCNTNKDTLGDDQLPKPCDPGNLTNDQSKPSQD
VKGTSPERPQDPAAAEAAGRLSPSPLSGTEGDCEPEPLGHSSRDRGTDVEGPPKSTGVSA
DGVPSPQLDRIAENRPEGVPEQSNGERGEDSKAGQKVQEACAVQEKISSLRKVDRGHYRS
RRDRSSSGEHARDSRSGTEEQPRRKRPHHEWKRCRSERPEPCAAAPHAPCPGSLARSGHP
RSRSMGAPDQEWGRYHHAEAEHAWARENYPDGMRWGRFRYHHTRYASYPAREPWEWRPLH
GEREYDRAGPYSGRPHKDHYRGRKGHEPAAKERDRHRVSSPGAGLAHTPPPHPADKYAHD
KAALGAEDRGCDLTSQFHEHKNVKSRKRRYSSVGDKDSRVEKRAWRSFQKDPLEEPKAKK
HKKSKKKKSKDKHRERNSRRQQRSDLLLTRADAGLRGRHKRRKKKKRRRRRSRSENSSLR
GSEPPWPGAAGREAVDHFQGADGALPLAAGQPLHGVGPCPEKTKHFWMETRDDKCHLSKC
GQGKRTYLELRI
NT seq
3999 nt
NT seq
+upstream
nt +downstream
nt
atgaccacaggtgacaaagcttcagaatcttcagacccatcaacctgtcagaagcagcct
ggcagttctgaggcagtctcacctggagacatggaggcaggttctgccagctggggtact
gtgtcttcattaaatgatgtttcaagtcacgcgctttctttaggaccagtacctggtgct
gtagtttattcaagttcacctgtacctgaaaaatcaaaaccatcaccaccaaaggatcaa
gctctaggtgatggcattgctcctccagaaaaaattcttttcccatctgagaagatttgt
cttaagtggcagcaaactcatagagtaggagctgggctccagaatttgggcaatacctgt
tttgccaacgcagcgctgcagtgtttaacttatacaccaccacttgccaactacatgcta
tcacacgaacactccaagacatgtcatgcagaaggattttgtatgatgtgtacaatgcag
gctcatatcacacaagtgctgaaccatcctggggatgttattaaaccgatgtttgtcatt
aatgagatgcggcgcatagctaggcacttccgctttggaagccaagaagatgcccatgaa
ttccttcagcacactgttgatgctatgcaaaaagcatgcttgaatggcagcaacaaatta
gacagacacacccaggctaccacactcgtttgccagatatttggaggatacctgagatct
agagtcaaatgtttaaattgcaaaggtgtgtcagatacttttgatccatatctcgacata
acattggaaataaaggctgctcagagtgttaataaggcattggagcagtttgtgaagccg
gaacagctcgatggagaaaactcgtacaagtgcagcaagtgtaaaaatatggttccggct
tcaaagaggttcactatacacaggtcttctaacgttcttacactttctctgaaacgtttt
gcaaattttactggtggaaaaattgctaaggatgtgaaatatcctgagtatcttgatatt
cgaccgtatatgtctcagccaaacggagaacctatcatttatgatttgtatgcagtactg
gtacacactggttttaattgccatgctggccattacttctgctacataaaagctagcaat
gacctctggtaccaaatgaatgactccatcgtatctatcagtgatattagatcggtactc
agtcagcaagcttatgttctcttttatatcaggtcccacgatgtgaaaataggaggtgaa
cttactcattccgcccatagccctggccagtcctctccccaaccggtgatcagccagcgg
gttgtcagcaacacacaggcagcatccgggtttattggaccacagcttccttctcacatg
atgaagaacccacctcatctaaatgggacaggaccattgaaggaaatgccgagcagctcc
atgtcaagtcctaacgggaattccaatgtcagtaggactggccctgttaacgcctcaaca
tccgttcaggactggtcggttaacaggccctcagttattccagaacatcccaagaaacag
aaaatcacgatcagtattcacagcaagttacctgtgcaaaaaattcagtcacagcctact
cttcacagcagttctttggagagccctaacaagcccgccccctcatctaccgttacgact
tctactgcaatacagtctacctcgagtccccccatgatgcctgcgtctagtaaggtaacc
aagcagatcaccctgagggagtcctgccctgagcctgtgacgaacggcaggtccaagctg
agctctggagtgctggtcccctacggcgccgagtcgtccgaagagtccgacgaggaggcg
aagggcctcggcaaggagaatagcctccgtcccgccgagagcgcacgcgcccctgttcca
gttgccgaagatgtcggggcctctccgcacgagctccgagagcccgtagctctaaatggt
gctaccagtatggacagtgacctgaaagaaaacagcctaccctcgggtgctgccagctgc
caagtccagcctgctctacactcagaaaaccccttttctaaggcaaacagtctccctggg
aagttgatgcctgctcctttgccacttctcccagaagacaaaatcttagagaccttcaaa
ctcggcagcaaagggaaaggctccacagatgagatgagtacaactgggacagaggagagg
cctccgcaggaccctgaggctgagctggagcctggcagctctgctcccgattcccgtgag
aacctagagctggtcatgagccttagcagcaaattcaagaaagttttgtcaccctcagac
gccagcatcaaacctaccaaagaagaagtctctgaaaacattttggcaaaacccgaggag
gctttgccgagtatcaacaccttttgtaacaccaacaaggataccctcggggatgatcag
cttcctaaaccgtgtgacccagggaatttaacaaacgatcagagcaaaccgtcccaggac
gtgaaagggacgtcaccagagcgtccccaggacccggcggcggcagaagcagcggggagg
ctgagcccgagtcccttgtcaggtaccgagggcgactgtgagcctgagcccttgggtcac
agcagtcgggacagaggcacggatgtggagggtccccctaaaagcacaggggtgtccgca
gatggggtgccctctcctcaattagacaggatcgcagaaaaccgtccagagggggtcccc
gagcaaagtaacggtgagagaggtgaagacagtaaggccgggcagaaggtccaggaggct
tgtgcagtgcaggaaaaaatcagcagcctcagaaaggttgaccgaggacattaccgcagc
cgaagagaccgatcgtccagcggcgagcacgcgcgggacagcaggagcgggacggaggag
cagcctcgccggaagcggccccaccatgagtggaagcggtgccggtccgagcggcccgag
ccctgcgccgcggccccgcacgccccctgccccggatccctggccaggtcaggccacccg
cgctcccggagcatgggggcccccgaccaggagtggggccgctaccaccatgctgaggcc
gagcacgcctgggcccgggagaactacccggatgggatgcgctgggggcggttcaggtac
caccacaccaggtacgcctcgtacccggcccgcgagccgtgggagtggaggcccctccac
ggcgagcgagagtacgaccgagccgggccctatagcggccggccccacaaggaccactac
agaggccggaagggccacgagccggcggccaaagagagggaccggcaccgcgtcagcagc
cccggggcaggcctggcccacacaccccctccacaccccgctgacaagtacgcccacgac
aaggctgcactgggggctgaagacagaggctgtgacctcaccagtcagtttcacgaacac
aaaaacgtcaagtcgcgaaaacggaggtacagtagtgtaggggataaagacagccgtgta
gaaaagagagcctggagaagctttcagaaggatcctttagaggagcccaaagcgaagaag
cacaaaaaatcgaagaaaaagaaatccaaggacaaacaccgagagcggaattccaggcgc
cagcagcgctcggaccttctgctaacgcgcgctgacgccggcctgcgcggcagacacaag
aggaggaagaagaagaagaggaggaggaggcgctcaaggtccgagaactcgtcgctcaga
ggctcagagccaccctggcccggggccgccggccgcgaggctgtggaccatttccaggga
gcggacggcgctttgcccctcgcggccggccagcctctgcacggtgtgggaccttgccct
gagaaaacaaaacatttctggatggaaacgagggatgacaagtgtcatctgtctaagtgt
ggccagggtaagaggacatacttggagctgcgaatatag
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integrated database retrieval system
