Lipotes vexillifer (Yangtze River dolphin): 103081535
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Entry
103081535 CDS
T03090
Symbol
COL7A1
Name
(RefSeq) collagen alpha-1(VII) chain
KO
K16628
collagen type VII alpha
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve04382
Cornified envelope formation
lve04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
103081535 (COL7A1)
09158 Development and regeneration
04382 Cornified envelope formation
103081535 (COL7A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
fn3
VWA
VWA_2
Pur_ac_phosph_N
Kunitz_BPTI
Ig_DSCAM-DSCAML_C
DUF4992
Motif
Other DBs
NCBI-GeneID:
103081535
NCBI-ProteinID:
XP_007446284
UniProt:
A0A340WGI9
LinkDB
All DBs
Position
Unknown
AA seq
2986 aa
AA seq
DB search
MRLRLLVAALCAGILAGAPRVWAQHRERVSCTRLYAADIVFLLDGSSSIGRSNFREVRGF
LEGLVLPFSGAAGAQGVRFAAVQYSDDARTEFGLDALGSGGDVIRAIREISYKGGNTRTG
AAILQVADRVFLPQLARPGVPKVCILITDGKSQDLVDTAAQRLKGQGVKLFAVGIKNADP
EELKRVASQPTSDFFFFVNDFNILRTLLPLVSRRVCTTAGGVPVALPSDDSTSGPRDLVL
SEPGSQSLRVQWTAASGPVTGYKVQYTPLTGLGQPLSSEQREVSVPAGETSVRLQGLRPL
TEYQVTVVALYANSIGEAVSGTARTTALEGPELTIQNTTAYSLLVAWRSVPGATGYRVTW
RVFSGGATQQRELGPGQGSVLLSDLEPGTDYEVTVSTLLGRSVGPATSLTAHTDTSVEQT
LRPIILGPTSILLSWNLVPEARGYRLEWRRESGLEVPQKVVLPSDVTRYQLDGLQPGTEY
RLTLYTLLEGREVATPATVVPPGPELPVGPVTDLQATELPGQRVRVSWSPVPSATEYRIT
VRSIQGVERSLVLPGSQTAFDLDDVRAGLSYTVRVSARVGTREGGASILTVRREPETPLA
IPGLQVVASDATRVRVAWGPVPGASGFRVSWRTDNGLESSKTLPSESTATDIMGLRPGTS
YQVAVSALRGREEGPPAITVARTDPLGPMKTVRVTQVSSSSVTITWNRVPGATGYRVSWH
SGHGPEKSQLVSGEATVAELDGLEPDTEYTVHVWARVAGVDGTPASVVVRTDPQPVGSVS
KLQILNASSDVLQVTWVGVTGATAYRLTWGRSEGGPTRQEMLPGNTDSAEIRGLEGGVSY
SVRVTALVGDREGAPVSIVVTTPPEEAPPALETLRVVQRGEHSLRLRWQPVPGARGFRLR
WRPEGGQEQSQVLGPELSSYQLDGLEPATHYHIWLSVLGTAGEGPPSEVTAYTESPRVPS
TELRVVDTSVDSVTLAWTPVSGVSSYILSWQQLRGPGQELPGASQTLPGISSSQRVTGLE
PGISYIFSLTPVREGVQGPEASVTQTPVCPHGLMDVVFLLHTTRDNAHRAEAVKRALEHL
VSALGPLGPQAIQVGLLSYSHRPSPLFSLNSSYDLGVIRQKIRNIPYTDPSGNNLGTAVV
TAHRYLLAPDAPGRRRHVRGVMVLLVDEPLRGDIFSSIREAQAAGLKVMMLGLAGADPEQ
LRRLVPGRDSAQTFFTVDDGPSLDRAVSSLATALCETALTTQLQPKPCSVHCPKGQKGEP
GEMGLKGQAGPPGPPGLPGRMGVPGPQGPPGSTIAKGERGFPGADGPPGSPGRPGTPGTP
GPKGSPGWPSPRGEPGERGPRGPKGEPGEPGRVIGGEGPGLPGQKGDPGPPGPPGSRGPL
GDPGPRGPPGFSGTAVKGEKGDRGEQGPPGPGDGSVALGEPGLPGLPGSRGPQGSVGPPG
EKGEKGDCEDGAPGFPGQPGTPGEPGLRGLPGDTGPKGDRGLTGAIGETGEKGERGSPGP
AGPQGPPGVAGRPGPEGPEGPPGPTGRRGEKGEPGRPGDPAVGPGVAGAKGEKGDVGLPG
PKGATGVKGERGPPGLVLPGDPGPKGDPGVRGPIGLTGRAGPPGDSGPPGETGDPGRPGS
PGSIGPRGRDGEVGEKGDEGPPGEPGLPGKAGERGLRGAPGTRGPVGEKGDQGDPGEDGR
NGSPGPSGPKGDRGEPGPPGPPGRLVDTGLGVREKGESGDRGQEGPRGPKGDPGPPGASG
ERGISGLRGPPGPQGDPGVRGPAGEKGDRGPPGLDGRSGLDGKPGTPGSPGLPGAIGKAG
DPGRDGLPGLQGEQGPAGPSGPLGAPGKPGKDGKPGLNGKNGGPGDPGEDGRKGEKGDLG
APGRQGHDGPKGERGAPGSPGLQGPPGIPGQVGPPGQGFPGVPGGSGSKGERGETGPKGE
QGLPGERGLRGEPGSTVNVERLLENIGIKTSALREIVESWEESSGSFLPVPERRRGPKGD
PGERGPPGKEGPTGFSGERGPKGDRGDPGPQGPPGLAFGERGPPGPPGLAGEPGKPGIPG
LPGPAGSVGEAGRPGERGERGEKGERGEQGRDGPPGLPGPPGPKVAMDEPGSGLSREPGP
PGLKGAKGEPGSDGNQGPKGDRGEPGIKGDWGEPGQRGQNGSPGLPGERGVAGPEGKPGL
QGPRGTPGPMGGHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPGRGLPGPTGAVGLP
GPPGTSGLVGPQGAPGLPGQVGETGKPGVPGRDGASGKDGDRGAPGVPGSPGLPGPVGPK
GEPGPMGTPGQAVVGPPGAKGEKGTPGGLAEDLVGEPGAKGDRGLPGPRGEKGEAGRAGE
PGDPGEDGQKGAPGLKGHKGDPGVGVQGPPGPIGPPGLKGDLGPPGTPGAPGIVGLPGQT
GPRGEMGQPGPSGERGLAGPPGREGAPGPLGPRGPLGLAGAPGAPGLKGDKGDTGAGPPG
ARGERGEPGVRGEDGRPGLEGPRGLVGPPGSRGERGEKGDTGTSGLKGDKGDSAVIMGPP
GPRGAKGDMGERGPRGIDGDKGPRGDSGDPGEKGAKGQPGDKGSAGLLGVRGLTGPKGEP
GAAGIPGEPGSRGKDGAPGVRGDKGDVGFMGPRGLKGERGVKGACGLDGEKGDKGEAGPP
GRPGLAGRKGELGEPGVPGQSGAPGKEGLIGPKGARGFDGQPGPKGDQGEKGERGPPGIG
GFPGPRGSDGSSGPPGPPGSIGPKGPEGLQGQKGERGPPGESVVGAPGVPGTPGERGEQG
RPGPVGPRGEKGEAALTEDDIRGLVRQEMSQHCACQGQFITSGSRPLPSYAADTAGPQLH
ALPILRVSHAEEEGQVPPEDDEYEYSEYSMEEYQDPEAPWDGDAPDPCSLPLDEGSCTAY
TLRWYHRAVAGGTEACHPFVYGGCGGNANRFGTREACERRCPPWVAQSQGTDLSEHPSLR
AEPPHPMPPASPFSVADGMAFPTVDKPPLWLLPPWQMTQCGDGCGQ
NT seq
8961 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgcggctcctggtggctgcgctctgcgcggggatcctggcaggggctccccga
gtgtgggcccagcacagggagagagtgagctgcacgcgcctttacgccgctgacatcgtg
ttcctactcgacggctcctcgtccattggccgaagcaacttccgcgaagtgaggggtttc
cttgaggggctggtgctgcccttctccggggcagccggtgcacagggtgtgcgcttcgct
gctgtgcagtacagcgatgacgcacggacagaatttggcctggatgcacttggctcagga
ggtgatgtgatccgtgcaatcagagagatcagctacaagggaggcaacacgcgcacagga
gctgcaattctccaagtggctgaccgtgtctttctgccccagctggcccgacctggtgtt
cccaaggtctgcatcctcatcacagatgggaagtcccaggacctggtggacacagctgcc
cagaggctgaaggggcagggagtcaagctgtttgctgtggggatcaagaatgccgaccct
gaggagctgaagcgagtcgcctcacagccgaccagcgatttcttcttcttcgtcaacgac
ttcaacatcttgaggacgctactgcctcttgtttcccggagggtgtgcacaaccgcaggt
ggcgtgcctgtggccttgccctccgatgactcaacctctggtccacgagacctggtgctg
tctgagccaggcagtcaatccttgagagtacagtggacagcggccagtggccctgtgact
ggctacaaggtccagtacacgcccctgacggggctgggacagccactgtcgagtgaacag
cgggaggtgagcgtcccagcgggtgagaccagcgtgaggctgcagggtctccggccactg
actgagtaccaagtgacggtggttgccctctacgccaacagcatcggggaggccgtgagt
gggacagctcggacaactgctctggagggaccggagctgaccatccagaacaccacagcc
tacagcctcctggtagcctggcggagtgtgccaggtgccactggctaccgcgtgacatgg
cgagtcttcagtggtggggccacgcagcagcgggagctgggccctgggcagggatcagtg
ttgctgagtgacctggagcctggcacagactatgaggtgaccgtgagcaccctgcttggc
cggagcgtggggcctgccacctccctgactgcccacaccgacacttctgttgagcagacc
ctgcgtcccatcatcctgggccccacatccatccttctttcctggaacttggtgcctgag
gcccgtggctaccggctggagtggcggcgtgagagtggcttggaggtgccacagaaggtg
gtgctgccctctgacgtgacccgctaccagttggatgggctgcagccaggcactgagtat
cgcctcacactctacacgctgctagagggccgcgaggtggccacgcctgcaactgtggtc
ccccctgggccagagctgcctgtgggccctgtgacagacctacaggccaccgagctgcct
gggcagcgtgtgcgagtgtcctggagcccagttcccagcgccaccgagtatcggatcacc
gttcgcagcatccagggggtcgagcggagcctggtgcttcccgggagtcagacagctttt
gacttggatgacgtccgggctgggctgagctacacagtgcgggtgtcagctcgagtaggc
acccgagagggtggtgccagcatcctcactgttcgcagggagccagaaaccccacttgcc
atcccagggctgcaggtagtggcgtcagacgcaacgcgagtgagggtggcctggggacct
gtgcctggagccagtggatttcgggttagctggaggacagacaatggtctggagtccagc
aagacattgccctcagagtctactgccacagatatcatggggctgagacctggaacctcc
taccaggtggctgtgtcggcattgcgagggagagaggagggcccacctgcgatcaccgtg
gctcgaactgacccactgggcccaatgaagacagtccgtgtgactcaagtcagcagctca
tctgtcaccatcacctggaacagagttcctggtgccacaggatacagggtctcctggcac
tcaggccacggcccagagaaatcccagttggtttctggggaggccacagtggctgagctg
gatgggctggagccagataccgagtacacagtgcatgtgtgggcccgtgtggctggtgtg
gatgggacccctgcctctgtggttgtaaggactgaccctcagcccgtgggcagtgtctcg
aagctgcagatcctcaatgcttccagtgatgttctgcaggtcacctgggtgggagtcact
ggagccacagcttacagactgacctggggccggagcgagggtggccccacgagacaggag
atgctcccaggaaacacggactccgcagagatacggggcctcgaaggcggagtcagctac
tcagtgagagtgactgcacttgtgggggaccgtgagggcgcacctgtctccattgtcgtc
accacgccgcctgaggaggctccaccagccctggagacacttcgtgtagtgcagcgaggg
gagcactcgctgaggctgcgctggcagccggtgcccggggcacgcggcttccgtctgcgt
tggcgacctgagggtggccaggaacagtcccaggtcctggggccggaactcagcagctac
caactggatgggctggagccagcgacccactaccatatatggctgagtgtcttggggaca
gctggggaagggcccccctcagaagtaactgcatacactgagtcacctcgtgtcccaagc
actgaactgcgtgttgtagacacctcagtcgactcagtgactctggcctggaccccggtg
tctggggtatccagctacatcctatcctggcagcaactcagaggccctggccaagaattg
cctggggcctcacagacacttccggggatctcaagctcccagcgggtgacagggctagag
cctggtatctcctacatattctccctgacacctgtccgggagggtgtacagggtcctgag
gcctcggtcacacagaccccagtgtgtccccatggcctgatggacgtggtgttcctgctg
cataccactcgagacaatgctcatcgtgcagaggctgtgaagcgagccctggagcatctg
gtgtctgcacttgggcctcttgggccacaggccatccaggttggcctcctgtcctacagt
caccggccctccccactgttctcgctgaacagctcctatgaccttggtgtcatccggcag
aagatccgcaacatcccctacacggacccaagtgggaacaacctgggcacagctgtggtt
acagctcacagatacctgttggcaccagatgcccctggacgacgccggcatgtgcggggg
gtgatggttctactggtggatgagcccttgagaggtgacatcttcagctctatccgtgag
gcccaggctgctgggcttaaagtgatgatgctgggcctggcaggagctgacccagaacag
ctgcgtcgcttggtgccgggcagggactctgcccagaccttcttcaccgtggatgatggt
ccaagcttggaccgggcagtcagtagtctggcaacagccctgtgtgagacggctttgacc
acccagctacagccaaagccttgctcggtgcattgtccaaagggccagaagggggaaccc
ggagagatggggctgaaaggacaagccgggcctcctggcccccccggcctcccgggcagg
atgggtgttcctggcccccagggacctcctggaagtaccattgcgaagggtgagaggggc
ttccctggggcagatgggcctccaggcagccctggccgccctgggactcctggaaccccc
ggcccgaagggctccccagggtggcccagtcctcgtggagaaccaggagaacgagggcct
cgaggcccaaagggggagccgggagagcctggacgagtcattggaggcgagggcccaggg
cttcctgggcagaaaggggaccctggacctccaggtccccctggatctcgtggcccattg
ggagacccaggaccccgtggtcccccaggattttctggaacagctgtgaagggtgagaaa
ggtgatcgtggggagcagggtccccctggaccaggtgacggcagcgttgctttaggggag
cctgggctgccgggtcttcctggaagccgtggaccccaaggctcagttggcccccctgga
gaaaaaggggaaaagggtgactgtgaagatggagccccaggcttcccaggacaacctggg
accccgggtgagccgggcctacggggacttcctggagacactggccccaaaggtgaccga
ggactaacaggggccatcggtgagactggagaaaagggcgaacgtggatcccctggccca
gcgggaccacagggtccaccaggagttgctggacgtcctggacctgagggtcctgaaggg
ccaccaggacccactggccgccgaggagagaagggggagcctggtcgccctggggacccc
gcagtgggacctggggttgctggagctaaaggagagaagggagacgtagggctccctggg
cccaaaggagctaccggagtcaaaggggaacggggcccacctggcttggttcttcctggg
gaccctggccccaagggagaccctggagtccggggtcccattggcctcactggcagagca
ggacccccgggtgactcagggcctcccggagagacgggagaccctgggcgtcctggttcc
ccaggatccatcggcccccgaggacgagatggtgaagttggagagaaaggtgacgagggt
cccccgggtgaaccaggtttgcctggaaaagctggcgagcgtggccttcggggggcacct
ggaactcgggggcctgtgggtgagaagggagaccagggagatcctggagaggatggacga
aacgggagccctggaccatctggacccaagggtgaccgtggggagccaggtcccccagga
ccccctggacggctggtggacacgggacttggagtcagagagaagggagagtctggggac
cgtggacaggagggtcctcgaggacccaagggtgaccccggcccccctggagcttctggg
gagagaggcatcagtggacttcgggggcccccaggcccacagggggacccaggtgttcga
ggcccagcaggagaaaagggtgaccggggcccccctggcctggatggccgcagtggactg
gatgggaaaccaggaacccctggttcccctgggctgcctggtgctataggcaaggctggg
gacccagggagagacggacttcctggccttcaaggagaacagggccccgctggcccctct
ggtccccttggagcaccgggaaagccaggcaaggatggcaagcctggcctgaatgggaaa
aacggaggacctggggaccctggagaagatgggaggaagggagagaagggagatttgggc
gctcctgggagacaaggtcatgatggccccaagggtgagcgaggagctcctggtagccct
ggactccagggccccccgggcatcccagggcaggttggccctcctggccagggtttccct
ggtgttccaggaggttcgggctccaagggtgagcgtggggagactggacccaaaggggaa
cagggcctcccaggagagcgtggcctgagaggagagcctgggagcacggtgaatgtggag
cggttgctggaaaatattggcatcaagacgtctgccctgcgggagatcgtggagagctgg
gaagagagctctggcagcttcctgcctgtgcctgaacggcgtcgtggccccaagggggac
ccaggagagcggggcccaccaggcaaggagggccccactggcttttctggagaacgtggg
ccgaagggagatcgtggagaccccggccctcagggaccacctggcctggcctttggggag
aggggcccccctggacctcccggccttgctggggaacctggaaagcctggtatccctggg
ctcccaggcccggctgggagtgtgggagaggcagggagaccaggagagaggggagaacgg
ggagagaaaggagaacgtggagaacagggcagagacggccctcctggccttcctggcccc
cctggccccaaggtggccatggacgagccaggttctggactctctagagaaccaggaccc
cctggactcaagggtgctaagggggagccaggcagtgacggcaaccaaggccccaaagga
gacaggggtgagccaggcatcaagggagactggggagagcctggacagaggggtcaaaat
ggcagcccgggtctaccaggagagcgtggtgtggctgggcctgaggggaagccgggtctg
caaggtccgagggggacccctggcccaatgggtggccatggagaccctggaccacctggt
gccccgggtcttgctggccctgcgggaccccagggaccttctggcctgaagggggagcct
ggagagacaggaccaccaggacggggcctgcctggacccactggagctgtgggacttcct
ggcccccctggcacctcaggccttgtgggtcctcagggggcaccaggtttgcctggacaa
gtgggggagacagggaagccgggagtgccaggtcgtgatggtgccagtgggaaggacgga
gacagaggagcccctggcgtgccggggtcaccaggtctgcctggacctgtcggacctaaa
ggagagcctggacccatgggcacccctggacaggctgtggtcgggccccctggagcaaag
ggagagaagggcacccctggaggccttgctgaagacctggtgggagagccgggagccaaa
ggtgaccgaggactgccggggccacgaggcgagaagggtgaagccggccgtgctggggag
cctggagatcctggtgaagatggtcagaaaggggctccaggactcaaaggtcacaagggt
gacccaggtgttggggtccaggggccccctgggccaattggtcctccaggtctaaaggga
gacttgggcccccccggcacccctggtgctcctggtattgtggggctccccggtcagaca
ggccctcgtggagagatgggtcagccgggccccagtggagagcggggtctggcaggcccc
ccagggagagagggagccccaggtcccttggggccacgtggaccccttgggctagcggga
gcacctggggcccctggactcaaaggagacaagggagacactggagcagggccgcctggg
gcccgaggcgagcgtggggagccaggtgtccggggtgaagatggccgccccggcctggag
ggaccccgaggacttgtgggtcccccaggcagccggggggagcgtggggagaagggtgac
actggaacctcagggctaaagggtgacaagggtgactcagctgtgattatggggcctccg
gggccacgaggtgccaagggggacatgggtgaacgagggcctcggggcatagatggtgac
aaaggacctcggggagacagtggggaccctggagaaaagggcgccaagggacagcctgga
gacaagggctcagccgggttgctgggagtgcgtggactcacaggacccaagggtgagcct
ggtgctgcagggatccctggtgagccgggatcccgaggaaaagacggagcccctggtgtc
cgaggagacaaaggagatgttggcttcatgggtccccggggcctcaagggcgaacggggg
gttaagggagcctgtggccttgatggagagaagggagataagggagaagctggtcccccg
ggccgcccagggctggcaggacgcaagggagagttgggggagccgggtgttccaggccag
tcaggggcccctgggaaggagggcctgatcggtcccaagggtgctcgcggttttgatggg
cagccaggacccaagggtgaccagggcgagaaaggggagcgggggcctccaggaattggg
ggcttcccaggtcccaggggcagtgatggctctagtggtccccccgggccacctggcagt
attggtcccaaaggccccgaaggacttcagggccagaagggtgaacgaggtccccctgga
gagagtgtggtgggggcccctggggtccctggaaccccaggagagagaggggagcagggg
cggccaggacctgtggggccccgcggtgagaagggagaagctgcactgacagaggatgac
attcggggccttgtgcgtcaggagatgagtcagcattgcgcctgccagggccagtttatc
acatctggatcacgacccctccctagttacgctgcagacaccgctggcccccagctccac
gccttgcccattctccgcgtctcccatgcagaggaggaaggccaggtgccccctgaggat
gatgagtacgaatactctgagtattccatggaggaataccaggaccctgaggctccttgg
gatggcgatgccccggacccctgctcgcttccactggacgagggctcctgtactgcctac
accctgcgctggtatcatcgggctgtggcaggtggtacggaggcctgtcacccttttgtc
tatggtggctgcggagggaatgccaaccgttttgggacccgtgaggcctgtgagcgccgc
tgcccgccctgggtggctcagagccaggggacagacctgagtgagcatccctctctgcgg
gcagagcctccacaccctatgcccccagcttccccgttctctgtggctgatgggatggcc
ttccccactgtggacaaacccccattgtggctcctgcctccctggcagatgactcagtgt
ggggatggctgtgggcagtga
DBGET
integrated database retrieval system
