Lipotes vexillifer (Yangtze River dolphin): 103081572
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Entry
103081572 CDS
T03090
Symbol
SIX4
Name
(RefSeq) homeobox protein SIX4-like
KO
K15615
homeobox protein SIX4
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
103081572 (SIX4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lve03000
]
103081572 (SIX4)
Transcription factors [BR:
lve03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
103081572 (SIX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
HTH_TSHZ3
Motif
Other DBs
NCBI-GeneID:
103081572
NCBI-ProteinID:
XP_007471571
UniProt:
A0A340YD04
LinkDB
All DBs
Position
Unknown
AA seq
786 aa
AA seq
DB search
MSSSSPTGQIASAADIKQENGMQSASEGQEAPREVAGGAAAGLRPPAPAPFPLEPGDAAA
TAARVSGEEGAVAAAAAAGAAADQVQLHSELLGRHHHAAAAAAAAAQTPLAFSPDHVACV
CEALQQGGNLDRLARFLWSLPQSDLLRGNESLLKARALVAFHQGIYPELYSILESHSFES
ANHPLLQQLWYKARYTEAERARGRPLGAVDKYRLRRKFPLPRTIWDGEETVYCFKEKSRN
ALKELYKQNRYPSPAEKRHLAKITGLSLTQVSNWFKNRRQRDRNPSETQSKSESDGNPST
EDESSKGHEDLSPHPLSSSSDGVTNLSLSSHMEPVYMQQIGNAKISLSSSGVLLNGSLVP
ASTSPVFLNGNSFIQGPNGVILNGLSVGNTQTVSLNPPKMASNIVSNGISMTDILGSTSQ
DVKEFKVLQSSSANSAATTSYSPSAPVSFPGLIPSTEVKREGIQTVASQDGGSVVTFTTP
VQINQYGIVQIPNSGASSQFLNGSIGFSPLQLPPVSVAASQGNISVNSSTSDGSTFTSES
ATVQQGKVFLSSLAPSTVVYTVPNSGQTIGSVKQEGVERSLVFSQLMPVNQNAQVNANVS
SESISGSGLHPLSSSLVNVSPTHNFSLTPPTILNPTELNPDIADSQPMSAPVASKSTVTS
VSNTNYATLQNCSLITGQDLLSVPMTQAALGEIVPTAEAQVSHPSPTVHQDFVREHHLVM
QSVANIKENFLTNSESKATSNLMMLDSKSKYVLEGMVETVCEDLETDKKELAKLQTVQLD
EEMQDL
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcttcctcccccaccgggcagattgcaagtgcggcggacatcaagcaggagaat
gggatgcaaagcgcctcggaagggcaggaggcgccccgagaagtggcggggggcgcggcg
gcggggctgagacccccggctccagcccctttccccctggagccgggggacgctgcggcc
accgccgccagggtgagcggagaggaaggggcagtggctgcagcggcggcggccggagcg
gcggcggatcaggtacaactccactcggaacttctgggcaggcaccaccacgccgcggcc
gccgccgccgccgccgcgcagaccccactggccttctcgcccgaccatgtcgcctgcgtg
tgcgaggcgctgcagcaggggggcaacctggaccgcctggcccggttcctgtggtccctg
ccccagagcgacctgctacgtggcaacgagagcctgctgaaggcgcgggcgctggtggcc
ttccaccagggcatctaccctgagctctacagcatcctcgagagccacagcttcgagtcg
gccaaccacccgctgctgcagcagctctggtacaaggcgcgctacactgaggccgagcga
gcccgcggccggccgctgggcgccgtggacaagtaccggctgcgcaggaaatttcccctg
ccccgcaccatctgggacggcgaggagacggtgtattgtttcaaggagaagtcgcgcaac
gcgctcaaggagctctacaagcagaatcgctacccttcgcccgccgagaagcggcacctg
gccaagatcaccggcctctccctcacccaggtcagcaactggttcaagaaccgccggcag
cgcgatcggaacccctctgagacccagtccaaaagtgagtcggatggcaatcctagcact
gaagatgaatccagcaagggtcatgaagatttgtctcctcatccactctccagttcatcc
gatggtgtcaccaacctcagcctttccagtcacatggagccagtatatatgcaacaaatt
ggaaatgctaaaatatcattaagctcttctggagttttgttgaatggaagtttggtacct
gccagtacttcacctgtcttccttaatggtaattctttcattcagggacccaatggagtt
atccttaatggattaagtgtgggaaatacacagacagtgtcactgaacccaccaaaaatg
gcatcaaacattgtgagcaatggtatatccatgactgacatactggggtctacctcccag
gatgtgaaggaattcaaagttctccagagttcttcagctaactcagcagccaccacctcc
tatagccccagtgctcctgtgtcattcccagggctgatacccagcactgaggtgaaaaga
gaaggtattcaaacagtggcttcccaggatggaggttctgtagtgacttttaccacacca
gtgcaaattaaccagtatggcatcgtccagatccccaattccggagcaagcagtcagttc
cttaatgggagcattggattctctccactgcagctgcctcctgtttcagtggcagcttca
caaggtaatatttcagtaaattcaagcacttcagatgggagcacatttacaagtgagtct
gccacagtccagcaaggaaaggttttcttgagctctcttgctcccagcacagtggtatac
actgttcctaattcaggccagactataggatctgttaaacaggagggtgtggagaggagc
ctggtgttttctcagttgatgcctgtcaatcagaatgcacaagtaaatgcaaacgtgtct
tctgaaagtatctcgggaagtggcctccacccattgtcctcctccttagttaatgtatcc
ccaactcacaatttttccctgactccccctaccatactaaaccccactgagctaaatcct
gacattgctgatagccagccaatgtctgcacctgtggcaagcaaatctactgtgacatct
gtcagcaacactaactatgcaactcttcagaactgctcccttattactggtcaagatcta
ttatcagtacccatgacccaggctgcccttggggaaatagttcccacagctgaagcccag
gtgagtcacccctcccctacagtacaccaggattttgtcagagaacatcatttggttatg
caatcagtagctaacataaaagagaatttcttaacaaattctgagagcaaagcaacaagc
aacttaatgatgctggactccaaatccaagtatgtcctagagggcatggttgagactgtc
tgtgaagacctggaaacagacaaaaaagagcttgccaagctccagactgtccaattggat
gaagagatgcaagacttgtaa
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