Lipotes vexillifer (Yangtze River dolphin): 103081676
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Entry
103081676 CDS
T03090
Symbol
TNRC6B
Name
(RefSeq) trinucleotide repeat-containing gene 6B protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lve03019
]
103081676 (TNRC6B)
03036 Chromosome and associated proteins [BR:
lve03036
]
103081676 (TNRC6B)
Messenger RNA biogenesis [BR:
lve03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103081676 (TNRC6B)
Chromosome and associated proteins [BR:
lve03036
]
Eukaryotic type
Gene silencing
piRNA pathway
103081676 (TNRC6B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
RRM_occluded
RRM_1
Motif
Other DBs
NCBI-GeneID:
103081676
NCBI-ProteinID:
XP_007454051
UniProt:
A0A340WYA2
LinkDB
All DBs
Position
Unknown
AA seq
1831 aa
AA seq
DB search
MREKEQEREEQLMEDKKRKKEDKKKKEATQKVTEQKTKVPEVTKPSLSQPTAASPIGSSP
SPPVNGGNNAKRVAVPNGQPPSAARYMPREVPPRFRCQQDHKVLLKRGQPPPPSCMLLGG
GAGPPPSTAPGANPNAQVTGALLQSEGGTAPESALGGAAASHYANPTWGPGASSNNGASP
NPIHIWDKVIVDGSDMEEWPCIASKDTESSSENTTDNNSASNPGSEKSTLPGSTTSNKGK
GSQCQSASSGNECNLGVWKSDPKAKSVQSSNSTTESNNGLGNWRNVSGQDRIGPGSGFSN
FNPNSNPSAWPALVQEGNSRKGALETDTSNSSAQVSTVGQASREQQSKMENAGVNFVVSG
REQAQIHNTDGPKNGNTNSLNLSSPNPMENKGMPFGMGLGNASRSTDAPSQSTGDRKTGS
VGSWSAARGPSGTDTASGQSNSGNNGNNGKDREDSWKGAPVQKSTGSKNDSWDNNNRSTG
GSWNFGPQDSNDNKWGEGNKMTSGVSQGEWKQPTGSDELKIGEWSGPNQPNSSTGAWDNQ
KGHPLPENQGNAQAPCWGRSSSSTGSEVGGQSTGSNHKAGSSDSHNSGRRSYRPTHPDCQ
AVLQTLLSRTDLDPRVLSNTGWGQTQIKQDTVWDIEEVPRPEGKSDKGTEGWESAATQTK
NSGGWGDAPSQSNQMKSGWGELSASTEWKDPKNTGGWNDYKNNNSSSWGGGRPDEKTSSS
WNENSNKEQGWGGGRQPNQGWTSGKNGWGEEVDQAKNSNWESSASKPVSGWGEGGQNEIG
TWGNGGNASLASKGGWEDCKRSTAWTETGRQPSSWNKQHQQQQQAQQPPPPQPETSGSWG
GPAPPPPGNGRPSSSNWSSGPQPVNPKDEEPSGWEEPSPQSISRKMDIDDGTSAWGDPNS
YNYKNVNLWDKNSQGGPAPREPNLPTPMTAKSASVWSKSTPPAPDNGTSAWGEPNESSPG
WGEMDDTGASTTGWGTTPSSAPNAMKPNSKSMQDGWGESDGPVTGTRHPSWEEEEDGGVW
NTAGSQGSASSHSSASWGQGGKKQMKCSLKGGNNDSWMNPLAKQFSNMGLLSQTEDNPSS
KMDLSVGSLPDKKFDVDKRAMNLGDFNDIMRKDRSGFRPPNSKDMGTTDSGPYFEKLTLP
FSNQDGCLGDEAPCSPFSPSPSYKLSPSGSTLPNVSLGAIGTGLNPQNFAARQGGNHGLF
GNSTAQSRGVHTPVQPLNSSPNLRAQVPPQFISPQVSASMLKQFPNSGLNPGLFNVGPQL
SPQQIAMLSQLPQIPQFQLACQLLLQQQQQQQLLQNQRKLSQAVRQQQEQQLARMVSALQ
QQQQQQRQPSMKHSPSHPVGPKPHLDNMVPNALNVGLPDLQTKGPIPGYGSGFSSGGMDY
GMVGGKEAGTESRFKQWTSMMEGLPSVATQEANMHKNGAIVAPGKTRGGSPYNQFDIIPG
DTLGGHTGPAGDSWLPAKSPPTNKIGSKSSNASWPPEFQPGVPWKGIQNIDPESDPYVTP
GSVLGGTATSPIVDTDHQLLRDNTTGSNSSLNTSLPSPGAWPYSASDNSFSNVHSTSAKF
PDYKSTWSPDPIGHNPTHLSNKMWKNHISSRNTTPLPRPPPGLTNPKPSSPWSSTAPRSV
RGWGTQDSRLASASTWSDGGSVRPSYWLVLHNLTPQIDGSTLRTICMQHGPLLTFHLNLT
QGTALIRYSTKQEAAKAQTALHMCVLGNTTILAEFATDDEVSRFLAQAQPPTPAATPSAP
AAGWQSLETGQTQSDPVGPALNLFGGSTGLGQWSSSAGGSSGADLAGASLWGPPNYSSSL
WGVPTVEDPHRMGSPAPLLPGDLLGGGSDSI
NT seq
5496 nt
NT seq
+upstream
nt +downstream
nt
atgagagagaaggagcaagaaagggaagaacagttaatggaagacaagaaaaggaagaaa
gaggataaaaagaaaaaagaagccactcagaaggtcacggaacaaaaaaccaaagtgccc
gaagtgacgaaaccaagtttaagccaaccaacggccgccagcccaattggcagctctcca
tcgccaccagtcaatggtggcaacaatgccaaaagggtggcagtgccgaacggacaaccg
ccaagcgccgcccgctacatgcctcgggaggtgccgccgcgattccgttgccagcaggac
cacaaagtgttactaaaacgagggcagcctcctccaccgtcctgcatgctcctcgggggc
ggggcggggcctcctccctccacagcgcccggagcaaaccccaacgcacaagtgacagga
gcgctgctgcagagcgagggtgggaccgcaccagagtcagcccttggaggtgctgctgct
tcacattatgcaaatcccacttggggcccgggagcctcctccaacaacggcgcctccccc
aaccctattcacatctgggacaaggtgattgtagacgggtctgacatggaagagtggcct
tgcattgccagcaaagacactgagtcttcttccgaaaacaccaccgataacaacagtgcc
tcgaaccctggctctgagaagagcactctgccaggaagcaccactagtaacaaaggaaaa
gggagccagtgccagtctgcaagttctgggaacgaatgtaatcttggggtctggaaatct
gaccctaaggctaaatctgttcaatcttccaactctactacagaaagcaacaatggacta
ggaaattggaggaatgtgagcggtcaggatagaattggacctggctctggctttagcaac
tttaacccaaatagcaacccatctgcctggccagcgctggtccaagaaggaaattctagg
aaaggggcattggaaacggatactagtaattccagcgcacaggttagcacagtaggtcag
gcatccagggaacagcagtcaaagatggaaaatgcgggtgttaattttgttgtctctggc
agagaacaggctcaaattcataacactgatggaccaaaaaatggaaacactaactccttg
aacttaagttcaccaaaccccatggagaataagggaatgcccttcggaatgggcttgggg
aacgcctccaggagcactgatgccccttcacaaagcactggagatcgaaagactgggagt
gttggatcttggagtgcagctagggggccttctggaactgacacagcctctggacagagc
aattctggaaacaatgggaacaatggaaaggatagagaggactcctggaaaggagctcct
gttcagaaatcaaccgggtcaaaaaatgactcttgggacaacaataacaggtctacgggt
gggtcctggaactttggccctcaggactctaatgacaacaaatggggtgaagggaacaaa
atgacatctggggtctctcagggagaatggaaacagccgactgggtctgatgagttgaaa
attggagaatggagtggtccaaaccaaccaaattctagcactggagcatgggacaatcaa
aagggccaccccctccctgaaaaccaaggcaatgcccaggctccctgttggggaagatct
tccagctccacgggaagtgaagttggaggtcaaagcactggaagcaaccacaaagcagga
agtagtgacagtcataattctggccgtcggtcgtacaggcccacacatcctgattgtcag
gctgtcttgcagactcttttgagccgaactgatttggaccccagggtgctctcaaacact
ggctggggccaaactcaaattaagcaggacacagtgtgggatattgaagaggtgccaagg
cccgaggggaaatctgacaaaggaactgaggggtgggagagcgctgccacacagaccaag
aactcagggggctggggagatgcacccagccaaagcaatcaaatgaagtctggatggggg
gagctctcagcctctacagagtggaaagaccccaagaacacaggaggctggaacgactat
aaaaacaacaactcttccagttggggaggaggacgaccagatgaaaagacatcttcctct
tggaatgagaattccaacaaggagcaggggtggggaggtggacgccagcccaatcaagga
tggacttctggaaagaatggttggggagaggaggtcgatcaggcaaaaaatagcaattgg
gaaagttctgccagtaaacctgtgtctgggtggggtgaaggagggcagaatgaaatcgga
acttgggggaacggtgggaatgcaagcctagcttcaaaaggcgggtgggaagattgcaaa
agatctacagcctggacagagacaggcagacaacccagttcctggaacaaacagcaccaa
cagcagcagcaggcacagcagccaccgccaccacaaccagagacttctggttcatgggga
ggcccagccccaccacctccaggcaatggacgaccttccagttccaactggagcagcggg
ccgcagccagtgaacccgaaggatgaggaacccagtggttgggaagagccgtccccacag
tcgattagtcggaagatggacattgatgatggcacttcagcgtggggagaccctaacagt
tacaactacaagaatgtgaatctgtgggataagaattcccaagggggcccagcacctcga
gaaccaaacctgcctaccccgatgactgctaaatcagcatcagtctggagcaaaagcaca
ccacctgctccagataatggtacttcagcttggggtgagccaaatgaaagcagtcctggg
tggggtgaaatggatgacacaggagcatcgaccacaggctgggggaccacaccctccagt
gctccaaatgccatgaaacctaattccaaatctatgcaagacggctggggggagagtgac
gggcctgtgacaggaacccgccatcccagctgggaagaggaggaggatggaggagtctgg
aacaccgccggctctcagggaagtgcttcctcccacagttcggcaagctggggccaagga
ggaaagaaacagatgaagtgctcactaaaaggaggaaacaatgattcatggatgaatccc
cttgccaaacagttttcaaatatgggattgctgagtcaaactgaagataatccaagtagc
aaaatggatttgtctgtagggagccttccagataaaaaatttgatgtggacaagcgagca
atgaatctcggggattttaatgatatcatgaggaaggatcgatctgggttccgtccacct
aattccaaagacatgggaaccacagatagtgggccttattttgagaagctgactttgcct
ttctccaatcaagatgggtgccttggggatgaggctccctgctctcccttctccccttct
cccagctacaagctgtctccctctggttccacactacccaacgtcagccttggagcaatc
ggcacagggctcaacccccaaaacttcgctgctagacaaggtggcaatcatggtttgttt
ggaaatagcacagcacaatcgagaggcgtgcacacccccgtgcagccgctgaattcttct
cctaatctccgggcgcaagtgcctccccagttcatttcgccccaggtttctgcctcaatg
ctcaagcagtttcccaacagtggcctgaatccaggtcttttcaatgtggggccccagtta
tctcctcaacaaattgccatgctgagccagcttccacaaattccccagtttcagttggcg
tgtcagctgctcctgcagcagcagcaacagcagcagttgttacagaaccagaggaagctt
tctcaagccgtgcgccagcagcaggagcagcagctggctcgaatggtgagcgccctgcag
cagcagcagcagcagcagaggcagcccagcatgaaacattcgccgtctcatcccgttggg
cccaagccgcatctggacaacatggtccccaacgctctaaatgtggggctcccagacctt
caaaccaaagggccaatacctggatatggttctggcttcagctctggcggcatggactac
ggcatggttggtgggaaggaggctggaacagagtctcgctttaaacagtggacctccatg
atggagggactgccctctgtagccacacaggaagccaatatgcacaaaaatggcgctata
gtggcccctggtaagacccgaggagggtcaccatacaaccagtttgatatcatcccgggt
gacacactgggtggccatacgggtcctgctggtgatagctggttacctgccaaatctcca
ccaacaaataaaatcggaagtaaatccagcaatgccagttggcctccagaattccaacca
ggagtgccatggaaaggtatccaaaacattgaccctgaatctgacccctatgtcacccca
ggaagtgtgctggggggtacagccacatctcccattgtagatactgaccaccaacttctg
cgggataacaccacagggtctaattcttccctcaacacctcgctgccttcacctggtgcc
tggccctacagtgcctctgacaactccttcagcaacgttcatagcacttcagcaaagttc
cctgattacaaatcgacatggtccccagatcccataggacacaaccccactcatctctcc
aacaagatgtggaaaaaccatatttcctcaaggaacactacaccgctgccccgcccgcct
cccggtctgaccaaccccaaaccgtcatctccctggagcagcacagcaccccgctcagtc
agggggtgggggacacaggactcacggcttgcctctgcctccacctggagtgatggtggt
tcagttcgtcctagttactggctggttcttcacaatctcactccacagattgatgggtca
accttgagaaccatctgcatgcagcatggcccactgctgacattccatctgaacctaacc
cagggcaccgccctgatccgatacagcaccaaacaggaggcggccaaggcccaaactgca
ctgcacatgtgtgtgttgggaaacactaccatcctggctgagtttgccactgatgatgaa
gttagccgctttctggcacaagctcagccccctacccctgcagcaaccccgagtgcaccc
gcagcgggttggcagtccctggagaccggccagacccagtcagatcccgtcggacctgct
ctgaatcttttcggtgggtccacagggctcgggcaatggagcagcagtgctggtggcagc
agcggggccgatcttgctggcgcttcattgtggggacccccaaactattcttctagcttg
tggggagtcccgaccgtggaagacccccataggatgggcagccctgctcctttactacct
ggtgaccttctgggaggagggtcggattcaatctga
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integrated database retrieval system
