Lipotes vexillifer (Yangtze River dolphin): 103081807
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Entry
103081807 CDS
T03090
Symbol
FREM1
Name
(RefSeq) FRAS1-related extracellular matrix protein 1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103081807 (FREM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
lve04091
]
103081807 (FREM1)
Lectins [BR:
lve04091
]
C-Type lectins
Lecticans
103081807 (FREM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Cadherin_4
Lectin_C
Big_9
Calx-beta
Motif
Other DBs
NCBI-GeneID:
103081807
NCBI-ProteinID:
XP_007465709
UniProt:
A0A340Y251
LinkDB
All DBs
Position
Unknown
AA seq
2175 aa
AA seq
DB search
MSSLRWGGLGALLLLLRLLPGWASPTLIRVNRGVRVMKGSSAFLSQDDLKFAIPKEKDAC
KVEVVMNEPITQRVGKLTPQVFDCHFLPNEVKYTHNGCPILDEDTVKLRLYRLTETDTFT
ETFILRVYLLEPDCNIIRMSDNVLEVSEFYGLSRAIDKNLLRFDYERTASLECTVRLDPV
GTRLPAHGQLVVVEPWPEEPRGDQPHSFFPESQLGTELKCPGGRCPLGLKKIGSLKVSCE
EFLLSGLRYQHLSPPSPHIDYISMRLDLTDSRSKIIYKSESVWLPVYIRAGIPNQIPRAA
FMAMFILEVDQFILTSLTTSVLDCEEDETPKPLLVFNITKAPLQGYVTHLWDHTRPVSSF
TWKDLSDMQIAYQPPNSSHSERRHYEVELEVYDFFFERSAPITVHISIRTADTNAPRVSW
NTGLNLLEGQSRAITWEQFQIVDNDDIHAVQVVIVDGLQHGQLTLRGGKGFLFTVADLQA
GVVQYHHDDSDSTKDFVVFRIFDGQHSIRHKFPINILPKDDSPPFLITNVVIELEEGQTI
LIQGSKLRASDMDSSDDYIFFNITKPPQAGEIMKKPAPGLIGYPVPGFLQMDLFNGIIYY
RHFGGEIFEDSFEFVLWDSHEPPNLSEPQVVTIHITPVDDQLPKEVPGVSRHLVVKETQV
AYITKKHLHFVDTESYDRELLYTVTTPPFFSSSRRHLDAGKLFMVDSIPRLTKNPAAPGL
KSFTQHAVNYMKVAYMPPMQDIGPHPRHVQFAFSVSNQHGGTLFGICFNITILPVDNQVP
EVFTNPLRVAEGSHCVISTEHVLVSDMDTKLDNIHLSLQRQPQHGRVELNGFPLNTGAIF
SWGDLQALKVRYQHDGSEILQDDILLEVTDGINAAECVLYIEVLPVNDEPPVLKADLIPM
MHCSEGEEVVITSEYIFATDVDSDDMKLMFMIVREPQRGTVRKAGVTVRQFSQGDVMAGA
VTYKHTGGEIGLVPCFDTITLVVSDTEAGPFVNGPHPSVPLRESFPVYDLNITVYPVDNQ
SPSIAIGTMFFVDEGFSAALTINHLSATDPDTAADDLEFVLVSPPQFGYLENTLPSAGFE
KSNTGISIASFQWKDMKALHINYVQSRHLRMEPTADQFMVYVTDGKRRSLEIPFYIIINP
TNDEAPDFIVRNVTVCEGQMRELDSSIINAVDQDMPKDRLLFSVTQKPRHGLLINGVFSK
DLPQYKQSPNPGQKHELVYNFSMELLKNGMRLMYLHDDSETLADDFTIQLSDGKHKILKT
ISVEVTPVNDEKPVLSKKAEITVNMGETRIISSAVLSAIDEDSPREKIYYLFERLPQNGQ
LKLKIGRDWVPLHPGMKCTQEEVDLNLLRYTHTGAMDSQNRDSFTFYLWDGDNRSPAFDC
HITIKDMGKGDIVIRTKPLLVSKGDRGFLMTTTLLAVDGTDKPEELLYVITSPPRYGQVE
YVHYPGVPITSFSQMDIAGQTVCYVHKSTAAAHRDTFRFIVSNGLQTKPGVFEITLETVD
TALPVVTRNKGLRLAEGATGLLSPDLLQLTDPDTAAENLTFLLAQLPRHGQLYLRGTVLL
PHSFTQLDVDSGHVTYRHSGGHSRTDRFTFVATDGTNEGFLVDGRRWQEPVSFTIQVDQV
DKAAPHVTHLHSPSQVGLLKNGCYGIYITSHVLKASDPDTDGNQIIFKILRGPQHGHLEN
TTTGEFIHEKFSQKDLNSKTVLYIINPSLEVNSDTMEFQVMDPTGNSATPQILELKWSRI
EWSQTEYEVCENVGVLPLEITRKGYSMDSAFVSVKVNQVSATAGKDFTMTPSKLIQFDPG
MSTKMWNIAITYDGLEEDDEVFEVILNSPVNAVLGTKTKTAVKILDSKGGQCHPSYAFNA
NMPNAWEKGIWRLLSPGASSRVTSGSFHPERRPLPSSKQLAVAKGDTLRDFDAEDLSLMK
LRTQGNGKRVHPSSVYRNGTDIIYNYHGMISLKLEDDSSSTHKSKAKVSIVSQPQKTIKV
AELPQADKEESTTGSHFPQQDRWPSFPKNCTLELKGLFHFEESLQKLYKCNGTAWKSWSP
HTKVEDKSCPAGWHHHLGYCHSLITEQKGTWIVAAQACREHHLGSLVTVLSRQHMQWLWD
ISGRKPFWIGLNDQVHAGHWEWIGGEPVTFTNWRRGPPQRSKPGKSCVLVQRQGKWQTKD
CKKGKSHNYMCSRKL
NT seq
6528 nt
NT seq
+upstream
nt +downstream
nt
atgagctctctacgctggggtgggcttggtgccctgctgctgctgctgaggctgctccca
ggctgggccagccccaccctcatccgtgttaaccgaggggtcagggtgatgaagggcagc
tccgccttcctgtctcaggatgacctgaagttcgccatccccaaagagaaagatgcctgc
aaagtggaagttgtgatgaatgaaccaataacccagagggttgggaaactcactccacag
gtctttgactgccatttccttcccaatgaagtaaagtatactcacaacggttgcccaatt
cttgatgaagacacagtgaagcttagactttacagattgactgagacagacaccttcacg
gaaacctttatcctgcgggtctatctcctggaaccagactgtaacatcatccgtatgagt
gacaatgtactggaggtgtctgaattctatggcctgtcacgagccattgataaaaacctg
ctcagatttgattatgagaggacggctagtctggagtgtacagtcaggctggaccctgtg
ggaactcggctgccagcccatggccagctggttgtggtggagccctggccagaagaacct
cgtggagatcagccacacagttttttccctgagtctcaactgggaacagaactgaagtgt
ccaggtggcagatgtcccctgggactgaagaaaataggaagtctcaaagtgagctgtgag
gagttcttgctgtcggggcttcgatatcaacatctgagtcccccttctccgcacattgat
tacatctccatgcgactggacctcacagatagcaggagtaaaatcatatacaagtcagag
agtgtgtggttacccgtctatatcagagctggcatccctaatcagattccaagggctgca
ttcatggccatgtttattctggaagtggatcagttcatcctgacctctttgactacatca
gttctggactgtgaagaggatgagacccccaaacccttgctggtgttcaacattactaaa
gccccgctccaaggctatgtgactcacctgtgggatcacaccagaccggtgtcctccttc
acctggaaggacctaagtgacatgcaaattgcctatcagccaccaaacagcagccattct
gagaggagacattatgaggtggagttggaagtatatgacttcttctttgaaaggagtgca
cctattaccgtccacatctccatcagaacagcagacacaaatgccccgagagtgtcctgg
aacacaggtctgaatctcctagagggacagtctcgggccatcacttgggaacagtttcag
attgttgacaatgatgacattcatgctgtccaggtagtcattgtggatggcctgcagcat
ggacagcttactctgagaggggggaaggggtttctcttcaccgtagctgaccttcaggct
ggagtcgttcaatatcatcatgacgacagtgactccaccaaagactttgtggtcttcagg
atattcgacggccaacacagcatccgacataagtttcccatcaacatcttgcccaaagat
gatagtccaccattcctcataaccaatgttgtgattgaactggaggaggggcagaccata
ctgatccagggttccaagctgagagcttcagacatggactccagtgatgactacatcttc
tttaatatcacgaaacccccacaggctggagagatcatgaagaagccagcaccaggactg
ataggctatcctgtccctggcttccttcagatggatctgttcaatggcatcatttactat
cgtcattttggtggagaaatctttgaagattcatttgaatttgtcctgtgggacagccat
gaacctccaaacctctcagagccacaggtggtgacaatccatatcactccagtagatgac
cagcttccaaaagaggttcctggagtttctcgacatttggttgttaaggaaacgcaggtg
gcctatatcaccaagaaacatctacattttgtagatacagaatcatatgacagggaactg
ctctacacagtaaccactcctccatttttctcctctagccgcagacacttggatgctggg
aaattattcatggtagacagcataccaaggctaaccaaaaaccctgcagctccagggttg
aagtcattcactcagcatgctgtgaactatatgaaagtggcctacatgccacccatgcaa
gatataggcccccatccccgacacgtccagtttgccttttccgtcagtaaccagcacggt
ggcactttgttcgggatctgctttaacatcacgattcttccggtggacaatcaggtccct
gaggtatttaccaaccctctgagagtggctgagggaagtcactgtgtcatcagcacagag
catgtcctagtttctgacatggacaccaaactggacaacatccacctctccctgcagaga
cagcctcagcacggaagggtggaactgaatggatttcctctaaacacaggggccatattt
tcttggggagacctccaggccttaaaagttaggtatcagcatgatggatctgagattctt
caggatgacatactactggaggtcacagatggcataaatgcagcagaatgtgtgctatac
attgaggtgttgcctgtaaatgatgagccaccggtcctaaaggcagacctcattcccatg
atgcactgctcagagggcgaagaggtggtcattacctctgaatacatttttgctactgat
gtggacagtgatgatatgaaactgatgttcatgattgttcgagaacctcagcgtgggaca
gtgaggaaagctggggtcacagtgcgtcagttttctcagggagatgttatggcaggggct
gtgacgtacaaacacacaggtggtgagattggcctggtgccttgttttgacaccataacg
ttggtagtctcggacacagaagctggcccttttgtgaatggacctcatccatctgttcct
cttcgtgagtcctttccagtgtatgatctcaacatcacagtgtatccagtggacaaccaa
tcaccttcaattgcaataggtaccatgttctttgtagatgagggtttctcagcagccctt
actattaaccatttgtctgccactgaccccgacactgcagcagatgacttggaatttgtt
ttggtttctcctccccagttcggctaccttgaaaacacactaccttctgcaggttttgaa
aaaagcaatactggcatcagcatagcttcgtttcagtggaaagacatgaaggctttacac
attaactatgtgcagtccaggcatctgaggatggaaccaacagccgaccagttcatggtg
tatgtcactgatgggaaacgacgctccttggagataccattttacattataatcaacccc
acaaatgatgaagctcctgattttatagtgcggaatgttactgtgtgtgagggtcagatg
agagagctggattcttccatcattaatgctgttgaccaggacatgcccaaggaccgcttg
ctgttcagtgtcactcagaagccacgtcatggcctcctcatcaacggggtgtttagcaaa
gacttgcctcagtataagcaatcacccaaccctggccagaagcatgaacttgtttacaac
ttttccatggaacttctcaagaatggaatgaggttgatgtatttgcatgatgactcagag
acccttgctgatgactttacaatccagttgtcggatgggaaacataaaatacttaaaacc
atttctgtagaggtcaccccagttaatgatgagaaaccagtgctgagcaagaaagctgaa
attacagtgaatatgggtgaaactcgtattatttctagtgcagttctctcagccatagat
gaagactcgcccagggagaagatttactacttatttgaaaggcttccccaaaatgggcaa
cttaagcttaagatagggagggactgggtccctctccatcctggcatgaaatgcactcag
gaagaagtggatctgaacttgctgaggtacacacacacgggcgcaatggattcccagaac
cgagacagcttcaccttctacctctgggacggtgacaataggtcccctgcatttgactgt
cacatcaccatcaaggatatgggaaaaggtgatattgtcatccggacaaaaccacttttg
gtgtctaaaggtgacagaggtttcctgatgaccaccaccctccttgctgtggacggaaca
gacaagcctgaggaacttctctacgtcatcacctccccaccgcgatatggccaggtcgaa
tacgtccactatcctggggtccccattacaagcttcagccaaatggacatagcaggacag
acagtctgctacgtacataagagcacggcagctgcccacagagacacgttcagattcatc
gtgagcaatggactgcagaccaagcccggggtgtttgagatcacactggagactgtggac
acagccttacccgtggtgaccaggaacaaggggctgagactggctgaaggggccacgggc
ctcctctcccctgacctccttcagctgaccgaccctgacactgcagcggagaacctcacc
ttccttttggcccagcttccacgacacggccagctctacctgcgggggacagtgctgctt
ccacacagtttcactcagctggacgtggacagcgggcatgtgacctacaggcactcggga
gggcactctcgcaccgaccgctttacttttgtggccacggatgggacaaacgaaggcttt
cttgtggatgggagaaggtggcaagaacctgtttcattcaccatccaggtggaccaggtg
gacaaagcagccccccacgtcacacatttgcattccccttctcaagtggggctcctgaaa
aatggttgttatgggatttacatcacttcccacgtgttgaaggcatcggacccagacact
gatggcaatcagatcatctttaagattttacgaggcccccaacatggacatctggagaat
acaacaacaggtgaatttatccatgagaaatttagccaaaaggacttaaacagtaagacc
gttctttacatcataaacccatctttggaagtaaattcagataccatggaatttcaagtc
atggaccccacagggaactctgccactcctcaaatcttggaactgaagtggtctcgtatc
gagtggtcacagactgaatatgaggtctgtgagaatgtgggcgtattgcccttggaaatt
accagaaagggatattccatggactcggcctttgtgagtgtaaaggttaaccaagtgtca
gctacagctggaaaggatttcactatgactccatctaagctgattcagtttgacccagga
atgtcaactaagatgtggaatatagcaattacctatgacggattagaggaagatgatgag
gtctttgaagtaattctgaactcccccgtgaatgcggttcttggcacaaagacaaaaact
gcagtgaaaattttggactcaaaaggaggacagtgccatccttcatatgccttcaatgca
aacatgcccaatgcgtgggagaagggcatttggagactgctctccccaggggcttcctca
cgcgtcacttctggttcctttcatccggaaagaagaccccttccatcttccaagcagcta
gcagtcgccaagggagacaccctgcgggactttgatgctgaagatctttctctaatgaag
cttaggacccaagggaatggcaaaagagtccatccatcctctgtttatagaaatggaaca
gacatcatctacaattatcatggaatgatttccctgaaactggaggatgacagttcctca
actcacaaaagtaaggccaaagtatccattgttagtcagccccaaaagacaatcaaagtg
gcagaactgcctcaagcagataaggaggaatccacaaccggctcacacttcccccaacag
gaccgttggccctcatttccaaagaactgcacactggaattaaagggactcttccacttt
gaagaaagcctccagaagctgtataagtgcaatggaactgcctggaaatcttggagccct
cacaccaaggtggaagataaatcatgcccagctgggtggcaccatcacttaggctactgc
cactccttgatcacagagcagaagggcacctggatcgtagccgcccaagcttgcagggaa
catcacctgggcagccttgtaactgtcctctccaggcagcatatgcaatggctttgggac
atcagtggaagaaagcccttttggataggtttgaatgaccaagtgcatgctggccactgg
gagtggatcggcggtgaacctgtgaccttcaccaactggaggagagggcctcctcaacgt
tcaaagcctggcaagagctgtgttttggttcaaagacaaggaaaatggcaaacaaaggac
tgtaagaagggcaaatctcacaattatatgtgctccaggaaactctaa
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integrated database retrieval system
