Lipotes vexillifer (Yangtze River dolphin): 103081849
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Entry
103081849 CDS
T03090
Symbol
SHANK3
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 3
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
103081849 (SHANK3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
PDZ_6
Ank_3
Ank_5
PDZ
SH3_2
FERM_f0
SH3_9
Motif
Other DBs
NCBI-GeneID:
103081849
NCBI-ProteinID:
XP_007454140
UniProt:
A0A340X4W4
LinkDB
All DBs
Position
Unknown
AA seq
1586 aa
AA seq
DB search
MQLSRAAAAAAAAPAEPSAPLSPVPAPAPPGPLPRSAADGAPVGGQGGPGRREEPRGAQL
PAASGHGRGAGMDGPGASAVIVRVGIPDLQQTKCLRLDPAAPVWAAKQRVLCALNHSLQD
ALNYGLFQPPSRGRAGKFLDEERLLQEYPPNLDTPLPYLEFRYKRRVYAQNLIDDKQFAK
LHTKANLKKFLEYVQLHNTEKVARLLDKGLDPNFHDPDSGECPLSLAAQLDDATDLLKVL
RNGGAHLDFRTRDGLTAVHCATRQRNAAALTTLLDLGASPDYKDSRGLTPLYHSALGGGD
ALCCELLLHDHARLGTTDENGWQEAHQACRFGHVQHLEHLLFYGANMGAQNASGNTALHI
CALYNQESCARVLLFRGANKDVRNYNSQTAFQVAIIAGNFELAEVIKTHKDSDVVPFRET
PSYAKRRRLAGPSGLASPRPLQRSASDINLKGEVQPAASPGPSLRSLPHQLLLQRLQEEK
DRDRDGDQQSDGSGPAAGRGSQSKISPSGPGGPGGPGPAPGPGPAPPAAPHSDPELLAVT
PGVGDRARLVGVLSIGEGGFWEGTVKGRTGWFPADCVEEVQMRQYDTRHETREDRTKRLF
RHYTVGSYDSLSAHSDYVIDDKVAVLQKRDHEGFGFVLRGAKAETPIEEFTPTPAFPALQ
YLESVDVEGVAWRAGLRTGDFLIEVNGVNVVKVGHKQVVALIRQGGNRLVMKVVSVTRKP
EEDGARRRAPPPPKRAPSTTLTLRSKSMTAELEELASIRRRKGEKLDEILAAATEPALRP
DIADADSRAATVKQRPTSRRITPAEISSLFERQGLPGPEKLPGSLRKGIPRTKSVGEDEK
LASLLEGRFPRSTSMQDTVREGRGIPPPPQTAPPPPPAPRYFDSGPPPAFSPPPPPGRAY
DTVRSSFKPGLEARLGAGAPGLYDSGAALGPLPYPERQKRARSMIILQDSAHEAGDVPRP
PPAATPPERPKRRPRPPGPDSPYANLGAFSASLFAPSKPQRRKSPLVKQRQVEDAQERAA
LAVGSPGPAGGSFAREPSPTHRGPRPSGLDYSAGDGPGLSFGGPVPGKDRRLEERRRSTV
FLSVGAVESSPPSADMPSLQPSRSIDERLLGAGATTGRDLLLPSPVSALKPLVSGSSLGP
SGSTFIHPLTGKPLDPSSPLALALAARERALASQAPSRSPTPVHSPDTDRPGPLFVDVQA
RDTERGPLASPAFSPRSPAWVPVPARREAEKAPREERKSPEDKKSMILSVLDTSLQRPAG
LIVVHATSNGQEPSGLGAGEEHPGTPELAPAPTQSAVVAEPLPSPRAQPPGSTPTDPGLG
QGSSEEEPELVFAVNLPPAQLSSSDEETREELARIGLVPPPEEFANGVLLATPLPGPGPS
PATLPGPASGKPSSEPPPAPESAADSGVEEADTRSSSDPHLETTSTISTVSSMSTLSSES
GELTDTHTSFADGHTFLLEKPPVPPKPKLKSPLGKGPVTFRDPLLKQPSDSELVAQQHHA
AAAGLASAAGPARPRYLFQRRSKLWGDPVESRGLPGPEDDKPTVISELSSRLQQLNKDTR
SLGEEPVGGLGGLLDPAKKSPIAAAR
NT seq
4761 nt
NT seq
+upstream
nt +downstream
nt
atgcagctgagccgcgccgccgccgccgccgccgccgcccctgcggagccctcggcgccg
ctgtcccccgtgccggccccggccccccccggccccctcccgcgcagcgcggccgacggg
gctccagtgggggggcagggggggccggggcgccgcgaggagccccggggcgcccagctc
ccggccgcgagcggccacggccggggcgcggggatggacggccccggggccagcgccgtg
atcgtgcgcgtcggcatcccggaccttcagcagacgaagtgcctgcgcctggacccggcc
gcgccggtgtgggcagccaagcagcgcgtgctctgcgccctcaaccacagcctccaggac
gcgctcaactacgggctctttcagccgccctcccggggccgcgcgggcaagttcctggac
gaggagcggctcctgcaggaatacccgcccaacctggacacgcccctgccctacctggag
tttcgatacaagcggcgagtttatgcccagaaccttattgatgataagcagtttgcaaag
cttcacacaaaggcgaacctgaagaaatttctggaatacgtccagctgcacaacacagag
aaggtggcgcgcctgctggacaaggggctggaccccaacttccacgatcctgactcagga
gagtgtcctctgagccttgcggcccagctagacgacgccacggacctgctgaaggtgctg
aggaacggcggtgctcacctggacttccgcacccgcgacgggctcaccgctgtgcactgt
gccacgcgccagcggaatgcggcggccttgacgaccctgctggacctgggcgcgtccccc
gactacaaggacagccgcggcctgacgcccttgtaccacagcgccctgggggggggagac
gccctctgctgtgagctccttctgcacgaccacgctcggctggggaccaccgacgagaac
ggctggcaggaggcccaccaggcctgccgctttgggcatgtgcagcacctggagcacctg
ctgttctacggagccaacatgggggctcagaacgcctcggggaacacagccctgcacatc
tgtgccctctacaaccaggagagctgtgcccgcgtcctgcttttccgtggagccaataag
gatgtccgcaattataacagccagacagccttccaggtggccatcatagcagggaacttt
gagcttgcggaggtcatcaagactcacaaagattcggatgttgtgccattcagggaaacc
cccagctatgcgaagcgacggcggctggccggccctagcggccttgcctctcctcggccc
ctgcagcgctcggccagtgacatcaacctgaagggtgaggtgcagccagcagcttctccg
ggaccttcactgcgaagcctcccccaccagctgctgctccagcggctgcaggaagagaaa
gaccgggaccgggatggtgaccagcagagtgacggcagtggccctgcagcaggcaggggc
agccagagtaagatcagcccgagcggtcccggcggccccggcggccccggtcccgcgccc
ggccctggcccggcgccccccgcggccccacacagtgaccctgagctcttggccgtgacc
cctggggtgggcgacagagcaaggttggttggggtgctcagcattggggagggcggtttt
tgggaggggaccgtgaaaggccgcacaggctggttcccggctgactgcgtggaggaggtg
cagatgagacagtatgacacgcggcacgaaacccgggaggaccggacgaagcgacttttc
cgccactacacggtgggctcctatgacagcctctctgcacacagcgattatgtcattgac
gacaaggtggctgtcctgcagaaacgggaccacgaaggctttggttttgtgctccggggg
gccaaagcagagacccccatcgaggagttcacgcccacgccggccttcccggcgcttcag
tatctcgagtcggtggacgtggagggcgtggcctggagggccgggcttcgcacgggggac
ttcctaatcgaggtgaatggagtgaacgtggtgaaggtcgggcacaagcaggtggtggct
ctgatccgccagggcgggaaccgcctcgtcatgaaggtggtgtcagtgacaaggaagccc
gaagaagatggggctcggcgcagagccccgccgccccctaagagggcccccagtaccacg
ctgaccctgcgctccaagtccatgacggcggagcttgaggagctcgcctccattcggaga
aggaaaggggagaagctggatgagatcctggcagccgccacggagccggcgctgaggcca
gacatcgcggatgctgactcgagagctgccaccgtcaaacagcggcccaccagtcggagg
atcacccctgctgagatcagctcactgtttgagcgccagggcctcccaggcccagagaag
ctgccaggctccctgcggaaggggattccacggaccaagtctgtaggagaagatgagaag
ctggcgtccttgctggaggggcgcttcccgaggagcacgtcgatgcaggatacggtgcgc
gagggccgaggtatcccgcccccgccgcagacggccccgccgcccccgcccgcaccccgc
tacttcgactccgggccgccccccgccttctcgccgccgcctccgccgggccgcgcctac
gacaccgtgcgctctagcttcaagcccggcctggaggcgcgcctgggcgcgggcgccccg
ggcctgtatgattccggcgcggccctggggccgctgccctacccggaacggcagaagcgc
gcgcgctccatgattatccttcaggactcggcgcacgaggcaggcgacgtcccccggccc
ccgccagcggccaccccgccggagcgcccgaagcgtcggccgcggccgcccggccccgac
agcccttacgccaacctcggcgccttcagcgccagcctcttcgcgccgtccaagcctcag
cgccgcaaaagcccgctggtgaagcagcggcaggtggaggatgcgcaggagcgcgcggcc
ctggccgtgggcagccccggcccggcgggcggcagcttcgcccgggagccctccccgaca
caccgcgggcctcggccgagcggcctcgactacagcgccggagacggccccgggctctcg
ttcggcggcccggtcccagggaaggaccggcggctggaggagcggcggcgctccaccgtc
ttcctgtctgtgggagccgtcgagagcagccctcctagcgcagatatgccctccctgcag
ccctcccgctccattgacgagcgcctgctgggggccggcgccaccaccggccgtgacctg
ctgctgccctcccccgtctccgctctgaagccattggtcagcggctcgagccttgggcct
tcgggctccaccttcatccacccgctcaccggcaaacccctggaccccagctcacccctg
gcccttgccctggctgcccgggagcgggctctggcctctcaggcgccctcccgctccccc
acacctgtgcacagccctgacaccgaccgccctgggcccttgtttgtggatgtgcaggct
cgtgacactgagcgagggcccctggcctccccagccttctccccgaggagccccgcctgg
gttcctgtgcctgctcgcagggaagccgagaaagctccccgggaggagcgcaagtcaccg
gaggacaagaagtccatgatcctcagcgtcctggacacatccctgcagcggccagccggc
ctcatcgtcgtgcacgccaccagcaatgggcaggagcccagtgggctgggggccggagag
gagcacccgggcaccccagagctggccccggcccccacgcagtcggccgtggtggcagag
cccctgcctagcccccgggcccagcctcctggcagtaccccgacagaccccgggctgggc
cagggcagctcagaggaggagccggagctggtattcgctgtgaacctgccgccggcccag
ctgtcctccagcgatgaggagaccagagaggagctggcccgcattggactcgtgccgcct
cctgaagagtttgccaatggggtcctgctggccaccccactccctggcccaggtccctcg
cccgccacgctgccaggcccggcctcagggaagccgagcagcgagccgccccctgccccc
gagtccgcagcggattcgggggtggaggaggccgacacgcgcagctccagcgacccccac
ctggagaccacgagcaccatctccacagtgtccagcatgtccaccctgagctcggagagc
ggggaactcaccgacacccacacctccttcgccgacggacatacttttctactcgagaag
ccaccagtgcctcccaagcccaagctcaagtccccgctggggaaggggccggtgaccttc
agggacccgctgctgaagcagccctcggacagcgagctcgttgcgcagcagcaccacgcc
gccgccgccgggctggcctccgctgccgggcctgctcgccctcgctacctcttccagaga
aggtccaagctgtggggggaccccgtggagagccgggggctccccgggcccgaagacgac
aagccaactgtgatcagtgagctcagctcccgcctgcagcagctgaacaaagacacccgc
tccctgggggaggagccggttggcggcctgggcggcctgctggaccctgccaagaagtcg
cccatcgcggcagctcggtga
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integrated database retrieval system