Lipotes vexillifer (Yangtze River dolphin): 103081937
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Entry
103081937 CDS
T03090
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve03030
DNA replication
lve03420
Nucleotide excision repair
lve03430
Mismatch repair
lve03440
Homologous recombination
lve03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
103081937 (RPA1)
03420 Nucleotide excision repair
103081937 (RPA1)
03430 Mismatch repair
103081937 (RPA1)
03440 Homologous recombination
103081937 (RPA1)
03460 Fanconi anemia pathway
103081937 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lve03000
]
103081937 (RPA1)
03032 DNA replication proteins [BR:
lve03032
]
103081937 (RPA1)
03400 DNA repair and recombination proteins [BR:
lve03400
]
103081937 (RPA1)
Transcription factors [BR:
lve03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
103081937 (RPA1)
DNA replication proteins [BR:
lve03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
103081937 (RPA1)
DNA repair and recombination proteins [BR:
lve03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
103081937 (RPA1)
MMR (mismatch excision repair)
103081937 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
103081937 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
Ubiquitin_At1g33420
IBR
DUF8001
Motif
Other DBs
NCBI-GeneID:
103081937
NCBI-ProteinID:
XP_007454265
UniProt:
A0A340X5B1
LinkDB
All DBs
Position
Unknown
AA seq
617 aa
AA seq
DB search
MVGHLSEGAIAAIMQQGDTSIKPILQVINIRPIATGNNPPRYRLLMSDGFNTLSSFMLAT
QLNPLVEEERLSSNCICQINRFIVNTLKDGRRVVILMELEVLKSAEEVGLKIGNPVPYNE
GHGQQPAVPPPVSAASPPASRPQQQNGSSGVGSTVSKTFGASKTFGKPGGTSLGSSSGGT
QAKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSIELVDESGEIRATAFNE
QADKFFPLIDVNKVYYFSKGTLKIANKQFTAVKNDYEMTFNNETSVMPCEDGHHLPTVQF
DFTGVGDLENKSKDSLVDIIGICKSYEDVTKITVKSNNREVSKRNIYLMDMSGKVVNATL
WGEDADRFDGSRQPVMAIKGARVSDFGGRSLSVLSSSTVIVNPDIPEAYKLRGWFDSEGQ
ALAGVSISDLKSGGIGGGNTNWKTLYEVKSENLGQGDKPDYFSSVATVVYLRKENCMYQA
CPTQDCNKKVIDQQNGLYRCEKCDSEFPNFKYRMILSVNIADFQENQWVTCFQESAEAIL
GQSTAYLGELKEKNEQAFEEVFQNANFRSFTFRIRVKLETYNDESRIKATVMDVKPVDYR
EYGRRLIVSIRRNAAAM
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggtgggccacctgagcgagggggctattgcggccataatgcaacagggagatacatcc
ataaaacccattctccaagtcattaacatccgtcccattgctacagggaataatccaccc
cgttatcgactgcttatgagtgatggatttaatactctgtcttctttcatgttggcaaca
cagttgaaccctcttgttgaggaagaacgattgtctagcaactgtatttgccagattaac
cgatttattgtgaacactctgaaagatggaaggagagtggttattttgatggagttagaa
gttttgaagtcagctgaagaagttggattaaagattggcaatccagtgccctataatgaa
ggacatggacagcagccagcagttcctcctccagtctcagcagccagtccaccagccagc
aggccccagcaacagaatgggagctcgggcgtgggttccactgtatctaagacttttggt
gcctcaaagacgtttggaaaacctggaggtaccagcctagggagcagctctgggggaaca
caggccaaagtggtacccattgccagcctcaccccttaccagtccaagtggactatttgt
gctcgtgttaccaacaaaagtcagatccgtacctggagcaattcccgaggggaagggaag
cttttctctatagaactagttgatgagagtggcgaaatcagagcgactgctttcaatgag
caagcggacaagttctttcctcttattgatgtgaacaaggtctattacttctctaaaggc
accctgaagattgccaacaaacagttcacagccgtcaaaaacgactatgagatgaccttc
aataatgagacttctgtcatgccctgtgaagatggtcatcatttacccacagtccagttt
gatttcacaggggttggtgacctagagaacaagtctaaagactcacttgtagacataatc
ggaatctgcaagagctatgaagatgtcactaaaatcacagtgaagtctaacaacagagaa
gtctctaagaggaatatctatttgatggacatgtcagggaaagtggtgaatgctactctg
tggggagaagatgctgatagatttgatggttctagacaacccgtgatggctatcaaagga
gccagagtttctgattttggtggacggagcctctctgtactgtcttcaagcaccgtcatt
gtgaaccctgacatcccagaggcctacaagcttcgtggatggtttgactcggaaggacaa
gccttagctggtgtttccatctctgatctaaagagtggaggaataggagggggcaacacc
aactggaaaactttatatgaggttaaatcagagaacttgggccaaggtgacaagcccgac
tattttagctctgtggcgacagtggtgtatcttcgcaaagagaactgtatgtaccaggcc
tgcccaactcaggactgcaataagaaagtgattgatcaacagaatggattgtaccgctgc
gagaagtgtgacagtgaatttcccaatttcaagtaccgcatgatcctgtcagtaaatatt
gctgattttcaagagaatcagtgggtcacatgtttccaggagtctgcagaggccatcctt
ggacaaagcactgcttatcttggggagttaaaagagaagaacgagcaagcatttgaggaa
gttttccagaatgccaactttaggtcttttacattcaggatcagggtcaaattggagacc
tacaatgatgagtctcgaattaaggccactgtgatggacgtgaagcccgtggactacaga
gaatatggcagaaggttgatcgtgagcatcaggagaaacgctgcggcgatgtga
DBGET
integrated database retrieval system
