Lipotes vexillifer (Yangtze River dolphin): 103082221
Help
Entry
103082221 CDS
T03090
Symbol
DDX3X
Name
(RefSeq) ATP-dependent RNA helicase DDX3X-like isoform X1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve04622
RIG-I-like receptor signaling pathway
lve05161
Hepatitis B
lve05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
103082221 (DDX3X)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
103082221 (DDX3X)
09172 Infectious disease: viral
05161 Hepatitis B
103082221 (DDX3X)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lve03019
]
103082221 (DDX3X)
03041 Spliceosome [BR:
lve03041
]
103082221 (DDX3X)
03036 Chromosome and associated proteins [BR:
lve03036
]
103082221 (DDX3X)
Enzymes [BR:
lve01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103082221 (DDX3X)
Messenger RNA biogenesis [BR:
lve03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
103082221 (DDX3X)
mRNA cycle factors
Common to processing body (P body) and stress granule
103082221 (DDX3X)
Spliceosome [BR:
lve03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
103082221 (DDX3X)
Chromosome and associated proteins [BR:
lve03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
103082221 (DDX3X)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
103082221
NCBI-ProteinID:
XP_007457252
UniProt:
A0A340XB15
LinkDB
All DBs
Position
Unknown
AA seq
662 aa
AA seq
DB search
MSHVAVENALGLDQQFAGLDLNSSDNQSGGSTASKGRYIPPHLRNREATKGFYDKDSSGW
SSSKDKDAYSSFGCRSDSRGKSSFFSDRGSGSRGRFDDRGRGDYDSIGSRGERGGFGKYE
RGGNSRWCDKSDEDDWSKPLPPSERLEQELFSGGNTGINFEKYDDIPVEATGNNCPPHIE
SFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKDKRDLMACAQTGSGKTAAFLLPILS
QIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVV
YGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQ
IRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVV
WVEESDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDR
EEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGL
ATSFFNERNVNITKDLLDLLVEAKQEVPSWLENMAYEHHYKGSSRGRSKSSRFSGGFGAR
DYRQSSGASSSSFSSSRASSSRSGGGGHGSSRGFGGGGYGGFYNSDGYGGNYNSQGVDWW
GN
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatgtggcggtggaaaatgcgctcgggctggaccagcagtttgctggcctagac
ctgaactcttctgataatcagagtggaggaagtaccgccagcaaagggcgctatattcct
cctcacttaaggaacagagaagctactaaaggattctatgataaagacagttcagggtgg
agttctagtaaagataaggatgcatacagcagttttggttgccgtagtgattcaagaggg
aagtctagtttcttcagtgatcgtggaagtggatcaaggggaaggtttgatgatcgtgga
cgaggtgactatgacagcattggcagccgtggtgaaagaggtggctttggaaaatacgaa
cgtggtggaaatagtcgctggtgtgacaaatcagatgaagatgattggtcaaaaccactc
ccgccaagtgaacgcttggaacaagagcttttttctggaggcaacaccgggattaacttt
gaaaaatacgatgacattccagttgaggcaacaggcaacaactgtcctccacacattgaa
agtttcagtgatgttgagatgggagaaattattatgggaaacattgagcttactcgctac
actcgtccaactccagtgcaaaagcatgctatccctattatcaaagacaagagagacttg
atggcttgtgcccaaacagggtctggaaaaactgcagcatttctcttgcccatcttgagt
cagatttattctgatggtccaggcgaggctttgagggccatgaaggaaaatggaaggtat
gggcgccgcaaacaatacccaatctccttggtgttagcaccaactagagaattggctgta
cagatctatgaggaagccaggaaattttcataccgatctagagttcgtccttgcgtggtt
tatggtggtgctgatattggtcagcaaattcgagacttagaacgtggatgtcacttgtta
gtagcgactccaggacgtctagtggatatgatggaaagagggaagattggattagacttc
tgcaaatacttggtgttagatgaagctgatcggatgttggatatggggtttgagcctcaa
atacgtagaatcgttgaacaagatactatgccaccaaagggagttcgccacactatgatg
tttagtgctactttcccgaaggaaatacagatgcttgctcgtgatttcttggatgagtat
atctttctggccgtaggaagagttggctctacctctgagaacatcacacagaaagtagtc
tgggtggaagagtcagacaaacggtcatttctgcttgaccttctaaatgcaacaggcaaa
gattcactgaccttagtgtttgtggagaccaaaaagggtgcagattctctagaggatttc
ttgtaccatgaagggtatgcctgtacgagtatccatggagaccgatctcagagagataga
gaagaggctcttcaccagttccgctcaggaaaaagcccgattctagtggctacagcagta
gcagcaagaggactggacatttcaaatgtgaaacatgttatcaattttgatttgcccagt
gatattgaagaatatgtacatcgcattggccgtacaggacgtgtaggaaaccttggcctt
gccacctcattctttaatgagaggaatgtaaatattaccaaggatttgttggatcttctt
gttgaagctaaacaagaagtgccatcttggttagaaaacatggcttatgaacatcactac
aagggtagcagtcgtggacgatccaaaagtagtagattcagtggaggatttggtgccaga
gactatcgacaaagtagtggtgccagcagttccagcttcagcagcagccgcgccagcagc
agccgcagtggtggaggcggccatggcagcagcagagggtttggtggaggtggctatgga
ggcttttacaacagtgatggatatggaggaaattataactcccagggggttgactggtgg
ggtaactga
DBGET
integrated database retrieval system
