Lipotes vexillifer (Yangtze River dolphin): 103082692
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Entry
103082692 CDS
T03090
Symbol
PCDHA4
Name
(RefSeq) protocadherin alpha-4
KO
K16493
protocadherin alpha
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
103082692 (PCDHA4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lve03036
]
103082692 (PCDHA4)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lve04515
]
103082692 (PCDHA4)
Chromosome and associated proteins [BR:
lve03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
103082692 (PCDHA4)
Cell adhesion molecules [BR:
lve04515
]
Cadherins
Protocadherins
103082692 (PCDHA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_FAT4_N
Ig_Cad99C_N
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
103082692
NCBI-ProteinID:
XP_007461543
UniProt:
A0A340XJD7
LinkDB
All DBs
Position
Unknown
AA seq
807 aa
AA seq
DB search
MRTKHCGLDMEFSWGIGQEYRRLLLSLLFLATWKAGSGQVRYSVPEEAKHGTFVGRIAQD
LGLELAELVPRLFRVASKGRGDLLEVNLQNGILFVNSRIDREELCGRSAECSIHLEVIVD
RPLQVFHVEVEVKDINDNPPVFPGTQKNLFMAESRPLDSRFPLEGASDADIGANALLTYT
LSPSEYFSLEKPPYEERVKRLGLVLRKPLDREEAPEIVLVLTASDGGKPELTGTVQLLVK
VLDANDNAPAFDRTLYEVKLLENVPNGTLVIKLNASDLDEGLNGNITYSFSTDILPNVKS
KFYIDPITGEIMVKGYIDFEESKSYEILVEGIDKGQPPLSGHCTVMVEVGDTNDNVPVME
FKSLSLPIREDAPLGTVIALISVSDLDSSVNGQVTCTLSPSVPFRLVSTFKNYYSLVLDS
ALDRESVANYEVGVTARDGGSPSLSATASVSVEVADVNDNAPAFAQPEYTVLVKENNPPG
CHIFTVSAWDADARENALVSYSLVERRVGERALSSYVSVHAESGKVYALQPLDHEELELL
QFQVSARDAGVPPLGSNVTLQVFVLDENDNAPALLLPGPGGGAGALSQLVARSVGAGHVV
AKVRAVDADSGYNAWLSYELQPAVGGARSPFRVGLYTGEISTTRDLDEADAPRQRLLVLV
KDHGEPALTATATVLLSLEDSGQAPKASSRASTGAAGAEAALVDVNVYLIIAICAVSSLL
VLTLLLYAALRCSAPPSEGARGPGKPTLVCSSAVGSWSYSQQRRQRVCSGEGPPKTDLMA
FSPSVPESGDRENQQPATEDSLSKVSV
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgagaacaaagcactgcgggcttgacatggagttttcctggggaatcggccaggaatac
cggcgtttgctgctctcacttctgttccttgcaacctggaaggccgggagcggccaggtc
cgctactccgtcccggaggaggccaaacatggcaccttcgtgggccgcatcgcccaggac
ctggggctggagctggcggagctggtgccgcgcctgttccgggtggcgtccaaaggccgc
ggggaccttctggaggtaaatctgcagaatggcattttgtttgtgaattctcggatcgac
cgggaggagctgtgtgggcggagcgcggagtgcagcatccacctggaggtgatcgtggac
cggccgctgcaggtgttccatgtggaggtggaggtgaaggacataaacgacaatcctcct
gtgttcccaggaacacaaaagaatctgtttatggctgaatccaggccgcttgactctcgg
tttccactagagggcgcctccgatgcagacattggggccaacgctctgctgacttacaca
ctgagccccagtgagtatttctcgctggaaaaaccaccctatgaagagcgagtaaaacgt
cttgggttagtattaaggaaacctttagacagagaagaagccccggagattgttttagtg
cttaccgcctctgatggcggcaaacctgagctaactggcaccgttcagttactcgtcaaa
gtgctggacgccaacgacaacgccccagctttcgacagaacactctatgaagtaaaatta
ctggaaaatgttcctaatggaacgttggtaattaaacttaacgcctcagatttagacgaa
ggcttgaatgggaatattacatattcattctcaactgatattttaccaaatgtgaaatcc
aagttctacatagatccaattactggagaaattatggtaaagggatatatcgattttgaa
gaaagcaaatcctatgaaattcttgtagagggcattgataaggggcagcccccactttct
ggccattgtacagttatggtggaagttggcgacaccaacgataatgtcccagtaatggaa
ttcaagtccttgtccctcccaattagggaagacgctccactgggcaccgtcatcgccttg
ataagcgtgtcagacctcgactccagtgtcaatgggcaagtgacttgcaccctgtcgccc
agcgttcccttcaggctggtgtccaccttcaagaattactattcattggttctggacagc
gccttggatcgcgagagtgtggcgaactatgaggtgggggtgaccgcgagggacgggggc
tcgccttccctgtcggccacagccagcgtgtccgtggaggtggccgacgtgaacgacaac
gcgcccgcgttcgcgcagcccgagtacacggtgttggtgaaggagaacaacccgcccggc
tgccacatcttcacggtgtcggcttgggacgcggacgctcgggagaacgcgctggtgtcc
tactcgctggtggagcggcgggtgggcgagcgagcgctgtcgagctacgtgtcggtgcac
gcggagagcggcaaggtgtacgcgctgcagccgctggaccacgaggagctggagctgctg
cagttccaggtgagcgcgcgcgacgcgggtgtgccgcctctgggcagcaacgtgacgctg
caggtgttcgtgctggacgagaacgacaacgcgcccgcgctgctgctgcccgggccgggc
ggcggggcgggcgcgctgagccagctggtggctcggtcggtgggcgcgggccacgtggtg
gcgaaggtgcgcgcggtggacgcggactcgggctacaacgcgtggctgtcgtacgagctg
cagccggcggtgggtggcgcgcgcagcccgttccgcgtggggctgtacacgggcgagatc
agcacgacgcgcgacctggacgaggcggacgcgccgcgccagcgcctgctggtgctggtg
aaggaccacggcgagccggcgctgacggccacggccaccgtgctgctgtcgctggaggac
agcggccaggcgcccaaggcctcttcgcgggcgtcgacgggcgccgctggcgcggaggcc
gctctggtggatgtgaacgtgtacctgatcatcgccatctgcgcggtgtccagcctgttg
gtgctcacgctgctgctgtacgcggcgctgcggtgctcggcaccgcccagcgagggcgcg
cgcgggcccgggaagcccacgctggtgtgctccagcgcggtggggagctggtcttactcg
cagcagaggcggcagcgggtgtgctctggggaggggccgcccaagacagacctcatggcc
ttcagccccagtgtacctgaatctggggacagagagaatcagcagccagcaactgaggat
tctctttcaaaggttagtgtataa
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