Lipotes vexillifer (Yangtze River dolphin): 103082942
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Entry
103082942 CDS
T03090
Symbol
ATG13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve04136
Autophagy - other
lve04140
Autophagy - animal
lve04211
Longevity regulating pathway
lve05010
Alzheimer disease
lve05014
Amyotrophic lateral sclerosis
lve05016
Huntington disease
lve05017
Spinocerebellar ataxia
lve05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
103082942 (ATG13)
04136 Autophagy - other
103082942 (ATG13)
09150 Organismal Systems
09149 Aging
04211 Longevity regulating pathway
103082942 (ATG13)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
103082942 (ATG13)
05014 Amyotrophic lateral sclerosis
103082942 (ATG13)
05016 Huntington disease
103082942 (ATG13)
05017 Spinocerebellar ataxia
103082942 (ATG13)
05022 Pathways of neurodegeneration - multiple diseases
103082942 (ATG13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lve04131
]
103082942 (ATG13)
03029 Mitochondrial biogenesis [BR:
lve03029
]
103082942 (ATG13)
Membrane trafficking [BR:
lve04131
]
Autophagy
Autophagosome formation proteins
ULK complex
103082942 (ATG13)
Atg1 complex
103082942 (ATG13)
Mitochondrial biogenesis [BR:
lve03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
103082942 (ATG13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
103082942
NCBI-ProteinID:
XP_007455833
UniProt:
A0A340X2Q1
LinkDB
All DBs
Position
Unknown
AA seq
551 aa
AA seq
DB search
METDLNSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYAVYNR
LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGEVQLNGLGEGFQTVRVGTVGTPV
GTITLSCAYRINLAFMSTRHFERTPPIMGIIIDHFVDRPYPSSSPMHPCNYRTAGEDTGV
TYPSVEDSQEVCTTSFSTSPPSQCVFTVTKAHFQTPTPVVTDTLRVPMAGLAFSHQLSSS
RLSCQPAALGVGSADLACPAVFAAGLNTTHPYQLMVPGKEGGVPLAPNQPAHGAQAGDQE
RLTTYTPSDGAHCAATPSSSEDTETVSNSSEGRASPHDVLETIFVRKVGAFVNKPINQVT
LTSLDIPFAMFAAKNLELEDVDPMVNPPDSPETTSPLQGSLHSDGSSGGSSGNTQDDFVM
IDFKPAFSKDDILPMDLGTFYREFQNPPQRSSLSIDIGAQSMAEDLDSLPEKLAVHEKNV
REFDAFVETLQ
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggaaactgatctcaattcccaggacagaaaggacctggacaagttcattaagtttttt
gccctcaagactgtccaagtgattgtccaggctcgactgggcgagaagatttgtactcgt
tcatcttcttccccaacgggttcagactggttcaatttagcaatcaaagacatcccagag
gttacgcatgaagcaaagaaggcgctggcagggcagctgcctgctgtcgggaggtctatg
tgtgtggagatctcactcaagacttctgagggagattccatggagctagaaatctggtgt
ctggaaatgaatgaaaagtgtgataaagaaatcaaagtttcctatgccgtgtacaacaga
ctgtcattgctactgaagtctctccttgctataactagggtgacaccagcttacagactg
tccaggaaacaagggcatgaatatgtcatattgtatagaatatattttggggaagttcag
ctgaatggcttaggagaaggtttccagacagttcgtgttgggacagtgggtacccctgtg
ggcaccatcactctttcttgtgcttacagaattaacttggcattcatgtccaccaggcac
tttgagaggaccccacctatcatggggattattattgatcactttgtggaccgtccctat
cccagttcctcgcccatgcatccctgcaattacagaaccgctggtgaggacactggagta
acatatccttctgtggaagattctcaagaagtgtgtaccacctctttttccacctcccct
ccatcccagtgtgtgtttactgtcacaaaggcacattttcagacccctactcctgtggtg
acggacactctgagggtccccatggcaggactggccttttcccatcaactctcaagctct
cgcctttcctgtcagcctgctgccctgggcgttggatcagctgacctggcttgtccagca
gtgtttgctgccggcttaaacaccacacacccttaccagctaatggttcccgggaaggaa
ggtggggtaccccttgctcccaaccagcctgcccacggtgcccaggctggtgaccaggag
agactgacaacctacaccccttctgatggggcccactgtgctgccacaccttccagcagt
gaggatactgaaactgtgtcaaacagcagtgagggacgggcctccccccatgatgtcttg
gagaccatctttgtccggaaagtgggggcttttgtcaacaaacccatcaaccaggtgacc
ctgaccagtttggacataccctttgccatgtttgctgccaagaatttggaactggaggat
gtggatcccatggtgaatcctccagattccccagagactacatctcctcttcagggcagc
ctgcactctgatggctccagtgggggcagcagtggcaatacccaggacgactttgtcatg
atcgacttcaaaccagctttttctaaagacgacattcttccgatggacctggggaccttc
tatcgtgaatttcagaacccccctcagcggagcagcctctccatagatatcggggcacag
tccatggctgaggacttggactcactaccagagaagctggctgtgcacgagaagaacgtc
cgagaatttgatgcctttgtagaaaccctgcagtaa
DBGET
integrated database retrieval system
